FFCP PHASE1:Hg19::chr11:66024737..66024765,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64837 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20716 | |||
|TSSclassifier=strong | |||
|UniProt=Q9H0B6,E9PI24 | |||
|association_with_transcript=0bp_to_ENST00000417856,ENST00000531240,NM_001134775,uc010rov.1_5end | |||
|cluster_id=chr11:66024737..66024765,+ | |||
|description=CAGE_peak_5_at_KLC2_5end | |||
|id=chr11:66024737..66024765,+ | |||
|ontology_enrichment_celltype=CL:0000542!4.50e-28!53;CL:0000051!4.50e-28!53;CL:0000838!9.78e-28!52;CL:0000084!1.06e-17!25;CL:0000827!1.06e-17!25;CL:0000791!3.00e-15!18;CL:0000789!3.00e-15!18;CL:0002420!3.00e-15!18;CL:0002419!3.00e-15!18;CL:0000790!3.00e-15!18;CL:0000945!5.16e-11!24;CL:0000826!5.16e-11!24;CL:0000625!4.67e-10!11;CL:0002087!3.89e-07!119;CL:0000236!5.82e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.30e-10;24!CL:0000542;7.27e-10;53!CL:0000236;1.75e-09;13!CL:0000791;4.24e-09;18!CL:0000789;4.24e-09;18!CL:0002419;4.24e-09;18!CL:0000084;3.01e-08;25!CL:0000625;4.88e-08;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.75e-16,52;CL:0000542,4.30e-16,53;CL:0000051,4.30e-16,53;CL:0000945,7.35e-11,24;CL:0000826,7.35e-11,24;CL:0000791,3.32e-09,18;CL:0000789,3.32e-09,18;CL:0002420,3.32e-09,18;CL:0002419,3.32e-09,18;CL:0000790,3.32e-09,18;CL:0000236,7.07e-09,14;CL:0000084,2.53e-08,25;CL:0000827,2.53e-08,25;CL:0000625,5.15e-08,11 | |||
|ontology_enrichment_development_v019=CL:0000051;7.27e-10;53!CL:0000790;4.24e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!8.08e-19!57;UBERON:0005068!8.08e-19!57;UBERON:0006241!8.08e-19!57;UBERON:0007135!8.08e-19!57;UBERON:0002780!1.06e-16!41;UBERON:0001890!1.06e-16!41;UBERON:0006240!1.06e-16!41;UBERON:0002616!2.54e-16!59;UBERON:0003080!5.09e-16!42;UBERON:0000955!8.16e-16!69;UBERON:0006238!8.16e-16!69;UBERON:0001869!1.89e-15!32;UBERON:0001017!1.92e-15!82;UBERON:0002020!3.19e-15!34;UBERON:0003528!3.19e-15!34;UBERON:0001893!6.30e-15!34;UBERON:0005743!9.77e-15!86;UBERON:0002791!3.93e-14!33;UBERON:0000073!1.25e-13!94;UBERON:0001016!1.25e-13!94;UBERON:0007023!1.73e-13!115;UBERON:0001950!2.04e-13!20;UBERON:0002619!3.45e-13!22;UBERON:0000956!9.58e-12!25;UBERON:0000203!9.58e-12!25;UBERON:0002346!1.66e-10!90;UBERON:0003075!5.69e-10!86;UBERON:0007284!5.69e-10!86;UBERON:0003056!1.36e-09!61;UBERON:0000153!2.17e-09!129;UBERON:0007811!2.17e-09!129;UBERON:0000033!1.29e-07!123;UBERON:0000924!7.09e-07!173;UBERON:0006601!7.09e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;5.72e-23;20!UBERON:0001869;1.01e-22;32!UBERON:0001893;1.46e-21;34!UBERON:0003528;3.31e-21;34!UBERON:0002020;3.31e-21;34!UBERON:0002619;9.85e-21;22!UBERON:0002791;2.97e-20;32!UBERON:0000956;5.02e-18;25!UBERON:0000203;5.02e-18;25!UBERON:0002780;2.98e-16;41!UBERON:0001890;2.98e-16;41!UBERON:0000073;1.70e-14;53!UBERON:0002616;1.70e-14;53!UBERON:0000955;4.45e-12;68!UBERON:0002420;2.32e-10;9!UBERON:0007245;2.32e-10;9!UBERON:0010009;2.32e-10;9!UBERON:0010011;2.32e-10;9!UBERON:0000454;2.32e-10;9!UBERON:0000200;3.40e-10;6!UBERON:0001017;4.37e-09;75!UBERON:0000369;4.53e-09;4!UBERON:0002435;4.53e-09;4!UBERON:0000204;4.53e-09;4!UBERON:0001871;1.03e-08;6!UBERON:0001876;1.11e-08;2!UBERON:0002370;3.09e-08;2!UBERON:0001905;3.09e-08;2!UBERON:0002757;3.09e-08;2!UBERON:0010134;3.09e-08;2!UBERON:0005058;3.09e-08;2!UBERON:0005408;3.09e-08;2!UBERON:0001899;3.09e-08;2!UBERON:0009113;3.09e-08;2!UBERON:0000349;2.49e-07;5!UBERON:0001872;4.48e-07;5!UBERON:0000125;8.89e-07;9!UBERON:0002308;8.89e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,2.36e-25,32;UBERON:0000073,9.42e-25,53;UBERON:0002616,9.42e-25,53;UBERON:0002780,2.80e-24,41;UBERON:0001890,2.80e-24,41;UBERON:0003080,2.80e-24,41;UBERON:0006240,2.80e-24,41;UBERON:0001893,1.12e-23,34;UBERON:0003528,1.50e-23,34;UBERON:0002020,1.50e-23,34;UBERON:0001950,2.03e-23,20;UBERON:0001049,3.63e-23,56;UBERON:0005068,3.63e-23,56;UBERON:0006241,3.63e-23,56;UBERON:0007135,3.63e-23,56;UBERON:0002791,3.29e-22,32;UBERON:0000955,5.07e-22,68;UBERON:0006238,5.07e-22,68;UBERON:0002619,3.85e-21,22;UBERON:0000956,2.20e-18,25;UBERON:0000203,2.20e-18,25;UBERON:0001017,1.16e-17,81;UBERON:0007023,1.14e-16,114;UBERON:0001016,2.26e-15,89;UBERON:0003056,5.39e-15,61;UBERON:0003075,2.90e-14,82;UBERON:0007284,2.90e-14,82;UBERON:0002346,2.26e-13,86;UBERON:0010371,2.01e-11,104;UBERON:0000200,2.28e-10,6;UBERON:0002420,3.27e-10,9;UBERON:0007245,3.27e-10,9;UBERON:0010009,3.27e-10,9;UBERON:0010011,3.27e-10,9;UBERON:0000454,3.27e-10,9;UBERON:0002370,3.31e-09,4;UBERON:0005058,3.31e-09,4;UBERON:0009113,3.31e-09,4;UBERON:0003295,3.31e-09,4;UBERON:0005562,3.31e-09,4;UBERON:0000369,4.74e-09,4;UBERON:0002435,4.74e-09,4;UBERON:0000204,4.74e-09,4;UBERON:0010082,4.74e-09,4;UBERON:0001871,7.31e-09,6;UBERON:0001876,2.01e-08,2;UBERON:0010314,5.91e-08,132;UBERON:0001905,7.71e-08,2;UBERON:0002757,7.71e-08,2;UBERON:0010134,7.71e-08,2;UBERON:0005408,7.71e-08,2;UBERON:0001899,7.71e-08,2;UBERON:0000349,3.55e-07,5;UBERON:0001872,4.58e-07,5 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,1.52826811495903,1.47781061009902,1.81034797021462,0,0.767658796194425,0.154816123316076,0.919421224478927,0.30120591877825,0.369754010166788,0.46480320348181,0.142169232487422,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09227722252426,0,1.28019066769952,0.800791974072025,1.72425731986345,1.32208974556972,1.90810750907073,0.569212969109448,1.76171156811282,0.382273228125229,0,0,0,0.393419540227666,2.35806457649499,0.616804496998528,0.83593247695339,0.651844533267181,0.473447805734733,0,0.779873198196215,0.589211814949674,0.443067789167242,0.270803863765016,1.66518715643378,0.910415432919148,0.657751618414705,0.829050053357545,1.15921234294021,1.63115219478266,0.802622484269139,0,0.906474741580529,1.91610246800961,0.34362744548263,1.26509846009751,0.95569624297229,1.30216690771284,1.90090408889675,0.451725357233318,1.66382594500744,1.24930726552346,0.473554504088034,0.821127996921047,0.604820229674197,0.802320587350522,1.15859523106239,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.392937226493138,0.364295288292542,0,0,0,0,0,0.571994910780128,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0.570471821544449,0,0.117434498643765,0,0,0,0.245668634623536,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0.243947412259191,0.795178609928912,0.348581828608555,0.518305275076852,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0,0,0.38474715694639,0,0,0,0,0,0,0,1.32438929824395,0.122988438543114,0,0.439001141634502,0,0.502644862058154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0.179117045405697,0.581267877027924,0.766765358330422,0,0,0.207328115540772,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0.896681151948218,0.591092280605782,0,0.898401253958239,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,1.2942852049117,0.213455115606889,0,0,0,0,0.153461973288062,0,0,0.511707249066704,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0.451199612907412,0.385076685522074,0,0,0.105551628892876,0,0,0,0,0,1.00337954770971,0,0.831076008928724,0.223874754722178,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.576570202095319,0.510450849978337,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,0.384888450902048,0.670302275535787,0,0.0941438007767792,0,0,0,0,0,0,1.13929437434833,0.476463550915578,0.411362273086194,0.648473311192717,0,0,0,0.962479855263359,0,0.185803175125719,0,0.924843963529383,0.797131363644112,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.445773537109913,0,0,0,0,2.98244294329889,1.1253553312841,0.111308705022906,0.16480387422676,0,0,0.276283915531148,0,0,0.492339221844278,0,0.359473404589307,0.179021174675609,0,0,0,0,1.93866549219044,1.39152147242777,0,0,0.174919999992391,0,0.1137934482855,0,0,0.344743373241465,0,0.173624994933292,0.885741385813839,2.17073589525734,0,0.442317039724898,0.886642856860642,0,0,0,0,0.113942055847001,0,0,0.217294743844016,0,0.183195186803725,0,2.04386596391473,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0.123563938946503,0.104421949505455,0.134802265961354,0,0.702793337176017,0.547364367646998,0,0,0,0,0.61214552326098,0.189559738885464,0.300646838828985,0.103688191397247,0,0,0,0,0,0,0,0.0979923974143777,0.174118413160805,0.17472666824203,0,0.290268993867255,0.511625219603299,0.0821154570532092,0.0969890164884194,0,0.225980740780532,0,0.19871461170299,1.51945910294109,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0.273810757783986,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0.13480708770837,0,0.338693328263138,0,0.817220436669454,0.321506296930038,0.825236619583403,0,0,0,1.88323625639876,0,0.0788057072991982,0.104909176269996,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517131825446202,1.05786081394152,0,0,0.106787412567695,0,0,0.496166021811951,0,0.121792598380896,0,0,0,0,0,0,3.54427271986794,1.58634144372552,0.625954653532499,0.573409195690071,0.110929051536852,1.05563885000352,0.138348634936231,0,0,0,0.235265819698172,1.40500471742064,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0.327130788511688,0.327609848846413,0,0,0,0.106691729694141,0.172214979660816,0,0.184105950251841,0,0,0.255788742607303,0,0.157265941855896,0,0.169732529954025,0.212574920101683,0,0,0,0,0,0,0.3062454773532,1.41304295212211,0,0.957803154342908,1.64093091392604,0.756215088665154,2.76629009856872,1.45328081068666,0,0,0.11796972334774,0,0.115525666150338,0,0,0,0,0.20170506870352,0,0.523813388962845,0,0,1.35075169236789,1.56215619722769,0.620060389503552,1.07806877329642,0,0,0,0.175871244359621,0,1.07140367175657,1.3451348888753,0,0.455324382702595,0,0.345701962667338,0.171488009437418,1.56330385846713,1.64431933907123,0.236387681767936,0,0.078493092850514,1.41404030924402,0,0,0.215927591218621,0,0.428859265059938,0.158013611732727,0,0,0,0,0.17071847709395,0,0,0,0.255640214277473,0,0,0,0,0,0,0,0,0,0,0,1.16969731731053,0.198950775161368,0,0,0,1.05673990496671,0,0,0.470317296361523,0,0,0.392616934229891,0.594092800654172,0,0,0.187967835959707,0.128915775947154,0.399764623699716,0,0,0.0802413666891683,0,0,0,0,1.97175321553653,1.30905207102113,0,0,0,0,0.126166424835079,0,0.126698501011437,0,0,0,0.250707539292375,0.530450887527676,1.60778478093707,0,0.310298987585686,0,0.23806443146374,1.42095601639213,1.67601728598816,0,0,0.202117188958219,0.217716747896961,0,0.673520530145875,0.143444410785353,0,0.407016343054873,0,0,0,0,0,0,0,0.402547587182052,0 | |||
|short_description=p5@KLC2 | |||
}} |
Latest revision as of 13:12, 19 September 2015
Short description: | p5@KLC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_KLC2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000417856, ENST00000531240, NM_001134775, uc010rov.1_5end |
EntrezGene: | KLC2 |
HGNC: | 20716 |
UniProt: | Q9H0B6E9PI24 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 1.75e-16 | 52 |
lymphocyte | 4.30e-16 | 53 |
common lymphoid progenitor | 4.30e-16 | 53 |
lymphocyte of B lineage | 7.35e-11 | 24 |
pro-B cell | 7.35e-11 | 24 |
mature alpha-beta T cell | 3.32e-09 | 18 |
alpha-beta T cell | 3.32e-09 | 18 |
immature T cell | 3.32e-09 | 18 |
mature T cell | 3.32e-09 | 18 |
immature alpha-beta T cell | 3.32e-09 | 18 |
B cell | 7.07e-09 | 14 |
T cell | 2.53e-08 | 25 |
pro-T cell | 2.53e-08 | 25 |
CD8-positive, alpha-beta T cell | 5.15e-08 | 11 |