FFCP PHASE1:Hg19::chr11:2160324..2160330,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=309bp_to_BC017277_5end | |||
|cluster_id=chr11:2160324..2160330,+ | |||
|coexpression_cluster_id=C227 | |||
|description=CAGE_peak_17_at_BC017277_5end | |||
|id=chr11:2160324..2160330,+ | |||
|ontology_enrichment_celltype=CL:0000349!4.59e-11!3;CL:0002577!4.59e-11!3;CL:0002541!7.77e-11!3;CL:0002536!7.11e-08!2;CL:0002575!9.90e-08!2;CL:0002537!5.80e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000349;5.06e-65;19!CL:0002577;9.58e-32;3!CL:0002536;1.56e-21;2!CL:0002537;5.55e-20;5!CL:0002541;3.22e-15;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,4.62e-65,19;CL:0002577,8.62e-32,3;CL:0002536,1.26e-21,2;CL:0002537,5.38e-20,5;CL:0002541,3.46e-15,3 | |||
|ontology_enrichment_development_v019=UBERON:0000358;9.61e-12;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.28e-32!14;UBERON:0000158!1.28e-32!14;UBERON:0000478!1.38e-24!24;UBERON:0003124!1.09e-22!7;UBERON:0001987!1.38e-13!4;UBERON:0004340!1.38e-13!4;UBERON:0000305!2.01e-12!7;UBERON:0000476!7.77e-11!3;UBERON:0000920!7.77e-11!3;UBERON:0004871!8.15e-11!8;UBERON:0004923!1.95e-09!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;6.22e-61;24!UBERON:0005631;5.14e-51;10!UBERON:0000158;5.14e-51;10!UBERON:0000305;1.48e-37;7!UBERON:0001987;5.39e-24;4!UBERON:0003124;3.22e-15;3!UBERON:0000920;3.22e-15;3!UBERON:0002426;3.85e-12;1!UBERON:0003831;3.85e-12;1!UBERON:0003898;3.85e-12;1!UBERON:0004830;3.85e-12;1!UBERON:0003830;3.85e-12;1!UBERON:0005175;3.85e-12;1!UBERON:0001774;3.85e-12;1!UBERON:0001103;3.85e-12;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.78e-73,14;UBERON:0000158,1.78e-73,14;UBERON:0000478,5.75e-61,24;UBERON:0000305,1.23e-37,7;UBERON:0003124,2.43e-37,7;UBERON:0004871,6.05e-33,8;UBERON:0001987,4.98e-24,4;UBERON:0004340,4.98e-24,4;UBERON:0000920,3.46e-15,3;UBERON:0004923,1.37e-14,66;UBERON:0002426,3.65e-12,1;UBERON:0003831,3.65e-12,1;UBERON:0003898,3.65e-12,1;UBERON:0004830,3.65e-12,1;UBERON:0003830,3.65e-12,1;UBERON:0005175,3.65e-12,1;UBERON:0001774,3.65e-12,1;UBERON:0001103,3.65e-12,1;UBERON:0010084,3.65e-12,1 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0.697801167972428,1.52908960491121,2.37390280405608,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232387885739037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,2.17048642156577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410952645100767,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0.24538298343828,0,0,0,0.178428988797162,0,0.117141414992713,0,0,0,0,0,0,0.587403472388222,4.11772108573027,0,0,0,1.5156378572313,3.32870879020994,3.93107381328584,0,0,0,0,0,0,0,0,0,0,0,0,0.846016147141356,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307007349452259,0,0,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.7435018131961,4.45447021248958,7.06469614828234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23056390438806,0,0,3.19001159731919,0.366390373607449,8.52855641629816,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,7.2231988256891,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.799238438328521,0,0,1.02956998717179,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0.134366944973453,0,0,0.630265458457789,0.412079291905832,0.337017719270924,0.590564889088493,0,0,0,0,0,0,0,0,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.9256200020999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795664888465099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.695433089210318,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0,0,0,0.235676547101626,0,0,0,0,0,0,0,0,0,0,0.730336388246517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1903221573187,0,0.0620747142958579,0,0,0.606351566874658,0,4.44903291410865,0,0,0.332660356546013,0,0,0,0.449126010532934,2.34640942403454,0,0.406896178315738,0,0.201273793591026,0 | |||
|short_description=p17@BC017277 | |||
}} |
Latest revision as of 21:04, 23 July 2015
Short description: | p17@BC017277 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_BC017277_5end |
Coexpression cluster: | C227_chorionic_amniotic_Mesenchymal_Placental_gastric_diaphragm_tongue |
Association with transcript: | 309bp_to_BC017277_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 4.62e-65 | 19 |
placental epithelial cell | 8.62e-32 | 3 |
amniotic epithelial cell | 1.26e-21 | 2 |
amnion mesenchymal stem cell | 5.38e-20 | 5 |
chorionic membrane mesenchymal stem cell | 3.46e-15 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.78e-73 | 14 |
membranous layer | 1.78e-73 | 14 |
extraembryonic structure | 5.75e-61 | 24 |
amnion | 1.23e-37 | 7 |
chorion | 2.43e-37 | 7 |
somatic layer of lateral plate mesoderm | 6.05e-33 | 8 |
placenta | 4.98e-24 | 4 |
allantois | 4.98e-24 | 4 |
egg chorion | 3.46e-15 | 3 |
organ component layer | 1.37e-14 | 66 |
chest muscle | 3.65e-12 | 1 |
respiratory system muscle | 3.65e-12 | 1 |
skeletal muscle of trunk | 3.65e-12 | 1 |
respiratory system skeletal muscle | 3.65e-12 | 1 |
thoracic segment muscle | 3.65e-12 | 1 |
chest organ | 3.65e-12 | 1 |
muscle of trunk | 3.65e-12 | 1 |
diaphragm | 3.65e-12 | 1 |
future diaphragm | 3.65e-12 | 1 |