FFCP PHASE1:Hg19::chr11:2159607..2159615,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=13bp_to_X06260_5end | |||
|cluster_id=chr11:2159607..2159615,- | |||
|coexpression_cluster_id=C172 | |||
|description=CAGE_peak_1_at_X06260_5end | |||
|id=chr11:2159607..2159615,- | |||
|ontology_enrichment_celltype=CL:0002541!7.10e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000349;6.34e-37;19!CL:0002541;7.55e-23;3!CL:0002575;4.44e-15;2!CL:0002537;5.82e-14;5!CL:0002577;1.74e-10;3!CL:0000669;5.52e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,6.11e-37,19;CL:0002541,8.13e-23,3;CL:0002575,4.61e-15,2;CL:0002537,5.83e-14,5;CL:0002577,1.62e-10,3;CL:0000669,5.62e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0003124;1.59e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!4.12e-15!14;UBERON:0000158!4.12e-15!14;UBERON:0003124!4.88e-10!7;UBERON:0004119!1.28e-09!169;UBERON:0000925!1.28e-09!169;UBERON:0006595!1.28e-09!169;UBERON:0000478!3.73e-09!24;UBERON:0000162!3.78e-09!14;UBERON:0001353!3.78e-09!14;UBERON:0000163!3.78e-09!14;UBERON:0006866!3.78e-09!14;UBERON:0000164!3.78e-09!14;UBERON:0000931!3.78e-09!14;UBERON:0004122!2.15e-08!15;UBERON:0003101!6.19e-08!22;UBERON:0000079!6.19e-08!22;UBERON:0002367!9.94e-08!11;UBERON:0010147!9.94e-08!11;UBERON:0009846!9.94e-08!11;UBERON:0003353!9.94e-08!11;UBERON:0004902!9.94e-08!11;UBERON:0003820!9.94e-08!11;UBERON:0009847!9.94e-08!11;UBERON:0004921!3.12e-07!129;UBERON:0004185!3.12e-07!129;UBERON:0003937!5.79e-07!12;UBERON:0005399!5.79e-07!12;UBERON:0000476!7.10e-07!3;UBERON:0000920!7.10e-07!3;UBERON:0000305!7.12e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;2.04e-35;10!UBERON:0000158;2.04e-35;10!UBERON:0000478;6.15e-35;24!UBERON:0003124;7.55e-23;3!UBERON:0000920;7.55e-23;3!UBERON:0000305;3.72e-17;7!UBERON:0001987;1.09e-16;4!UBERON:0002426;1.59e-08;1!UBERON:0003831;1.59e-08;1!UBERON:0003898;1.59e-08;1!UBERON:0004830;1.59e-08;1!UBERON:0003830;1.59e-08;1!UBERON:0005175;1.59e-08;1!UBERON:0001774;1.59e-08;1!UBERON:0001103;1.59e-08;1!UBERON:0001301;2.95e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.09e-50,14;UBERON:0000158,2.09e-50,14;UBERON:0003124,7.85e-37,7;UBERON:0000478,6.36e-35,24;UBERON:0000920,8.13e-23,3;UBERON:0000305,3.72e-17,7;UBERON:0001987,1.12e-16,4;UBERON:0004340,1.12e-16,4;UBERON:0004871,4.91e-15,8;UBERON:0004923,2.24e-11,66;UBERON:0002426,1.59e-08,1;UBERON:0003831,1.59e-08,1;UBERON:0003898,1.59e-08,1;UBERON:0004830,1.59e-08,1;UBERON:0003830,1.59e-08,1;UBERON:0005175,1.59e-08,1;UBERON:0001774,1.59e-08,1;UBERON:0001103,1.59e-08,1;UBERON:0010084,1.59e-08,1;UBERON:0001301,3.53e-08,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0.436882744260345,3.4289707169699,0.247532705920093,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0.438977620880838,0,0.300476117813194,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,1.10689594688802,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,1.00084595560703,5.96883765930587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0.858840442033979,0.500170521059677,0.542530047399471,0.623912584592421,0,0.157702415033935,0.234282829985426,0,0,0,0,0,0,2.93701736194111,1.02943027143257,0,0,0,1.21251028578504,0,3.32629322662648,0,0,0,0,0,0,0,0,0,0,0,0,13.2945394550784,0.200506470303285,0,0.114814448164607,0.182091168006717,0.524497659837696,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,1.33953315142039,0,0,0,0,0,0.096670718292122,0,0,0,0,0.145016693914229,0,0.534192213880424,0.165284915360978,0,0,0.10115778085555,0,0.31481234683064,0,0,0,0,0,0,0,0,0.190630193923825,0.255897791311334,0,0,0,1.07923474549989,0,0,0,0,0,0.48763373908959,0,0,0.409499734223957,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07116361708914,0.43050537267123,0,0,0.689170200620878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879049075631364,0,0,0,3.10367830158997,10.690728509975,3.68592842519078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.493217028184668,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.230850775511391,0,0.46112780877612,0,0,4.46601623624687,2.1983422416447,30.3829822330622,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0.611030144933625,0,0,0,0,2.40773294189637,0,0,0,0,0,0,0,0.884612114798832,0,0,0,0,0,0,0,0,0,0,0,1.04836000945218,0,0,0,0,0.0969890164884194,0.0882561266915003,0.451961481561065,0,0,0,0,0,0,0.999048047910651,0,0,2.9171149636534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0.134366944973453,0,0,0.551482276150566,0.164831716762333,0.674035438541849,0.885847333632739,0,0,0,0,0,0,0,0,0,0,0,0.157363764404994,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,5.30027555648885,0.129282956361551,0,0,0,0.213574825135389,0,0,0,0,0,0,0.544017803369474,0.2506898940227,0,0,0,0,0,0,0.573409195690071,0.332787154610557,0,0,0,0,0,0.470531639396343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567515953566836,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795664888465099,0.601682626794058,0,0,0,0,0,0,0,0,0,0,0,0.992422356778588,0,0,0,0,0,0.455324382702595,2.12885688390333,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0.571812353413251,0,0,0.347716544605159,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307988420568741,3.4794432940146,0.971421986118279,0,1.19370465096821,0.118920090777569,0,0,0,0,0.218559560503957,0,0,0,0.785233868459781,0,0,0,0,0.128915775947154,0,0,0,0,0.730336388246517,0,0,0.315543124386369,0,0,1.0580536810308,0,0.462175628631418,0,0,0,0,0,0,0,0,0.909344378618873,0.267964130156178,0,0,0,1.42838658878244,0.129177819672012,0.0620747142958579,0,0,0.202117188958219,0,2.73786640868225,0.0673520530145875,0.358611026963382,0.332660356546013,0.244209805832924,0,0,0.449126010532934,0,0,0,0,0.402547587182052,0 | |||
|short_description=p1@X06260 | |||
}} |
Latest revision as of 21:02, 23 July 2015
Short description: | p1@X06260 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_X06260_5end |
Coexpression cluster: | C172_chorionic_skeletal_tongue_amniotic_liver_gastrointestinal_Pericytes |
Association with transcript: | 13bp_to_X06260_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 6.11e-37 | 19 |
chorionic membrane mesenchymal stem cell | 8.13e-23 | 3 |
central nervous system pericyte | 4.61e-15 | 2 |
amnion mesenchymal stem cell | 5.83e-14 | 5 |
placental epithelial cell | 1.62e-10 | 3 |
pericyte cell | 5.62e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 2.09e-50 | 14 |
membranous layer | 2.09e-50 | 14 |
chorion | 7.85e-37 | 7 |
extraembryonic structure | 6.36e-35 | 24 |
egg chorion | 8.13e-23 | 3 |
amnion | 3.72e-17 | 7 |
placenta | 1.12e-16 | 4 |
allantois | 1.12e-16 | 4 |
somatic layer of lateral plate mesoderm | 4.91e-15 | 8 |
organ component layer | 2.24e-11 | 66 |
chest muscle | 1.59e-08 | 1 |
respiratory system muscle | 1.59e-08 | 1 |
skeletal muscle of trunk | 1.59e-08 | 1 |
respiratory system skeletal muscle | 1.59e-08 | 1 |
thoracic segment muscle | 1.59e-08 | 1 |
chest organ | 1.59e-08 | 1 |
muscle of trunk | 1.59e-08 | 1 |
diaphragm | 1.59e-08 | 1 |
future diaphragm | 1.59e-08 | 1 |
epididymis | 3.53e-08 | 1 |