FFCP PHASE1:Hg19::chr11:2018894..2018927,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt=Q9UHT2 | |||
|association_with_transcript=409bp_to_AF118081_5end | |||
|cluster_id=chr11:2018894..2018927,+ | |||
|coexpression_cluster_id=C2119 | |||
|description=CAGE_peak_5_at_AF118081_5end | |||
|id=chr11:2018894..2018927,+ | |||
|ontology_enrichment_celltype=CL:0000188!3.24e-08!9 | |||
|ontology_enrichment_celltype_v019=CL:0000349;1.82e-17;19!CL:0000188;6.21e-09;9!CL:0002577;1.19e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.65e-17,19;CL:0000188,7.46e-09,9;CL:0002577,1.12e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.53e-07;29 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001557!2.87e-13!19;UBERON:0001737!4.89e-13!9;UBERON:0005631!1.07e-12!14;UBERON:0000158!1.07e-12!14;UBERON:0004119!4.06e-10!169;UBERON:0000925!4.06e-10!169;UBERON:0006595!4.06e-10!169;UBERON:0000478!5.41e-10!24;UBERON:0004921!1.43e-09!129;UBERON:0004185!1.43e-09!129;UBERON:0003124!1.62e-09!7;UBERON:0001041!2.52e-09!98;UBERON:0000077!2.82e-09!130;UBERON:0000481!8.43e-09!347;UBERON:0001007!1.04e-08!155;UBERON:0001555!1.04e-08!155;UBERON:0007026!1.04e-08!155;UBERON:0003104!6.73e-08!238;UBERON:0009142!6.73e-08!238;UBERON:0000064!2.75e-07!219;UBERON:0000065!3.63e-07!53 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;6.10e-24;9!UBERON:0001557;6.10e-24;9!UBERON:0000478;2.37e-18;24!UBERON:0001134;2.97e-16;16!UBERON:0002036;2.97e-16;16!UBERON:0005631;2.53e-12;10!UBERON:0000158;2.53e-12;10!UBERON:0001987;8.61e-11;4!UBERON:0000305;1.87e-09;7!UBERON:0001723;7.36e-09;3!UBERON:0001033;7.36e-09;3!UBERON:0000922;2.03e-08;49!UBERON:0002385;3.71e-07;31!UBERON:0001015;3.71e-07;31!UBERON:0000383;3.71e-07;31!UBERON:0000072;4.39e-07;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,6.29e-24,9;UBERON:0005631,7.94e-21,14;UBERON:0000158,7.94e-21,14;UBERON:0001557,1.80e-18,19;UBERON:0000478,1.98e-18,24;UBERON:0003124,2.96e-13,7;UBERON:0001987,6.95e-11,4;UBERON:0004340,6.95e-11,4;UBERON:0000305,2.08e-09,7;UBERON:0000072,2.52e-09,47;UBERON:0001723,7.37e-09,3;UBERON:0001033,7.37e-09,3;UBERON:0010056,7.37e-09,3;UBERON:0004871,3.56e-08,8;UBERON:0004119,3.59e-08,160;UBERON:0000925,3.59e-08,160;UBERON:0006595,3.59e-08,160;UBERON:0000065,1.21e-07,54;UBERON:0004921,2.92e-07,118;UBERON:0001041,4.28e-07,87 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,7.85104671690332,0,0,0,0.245733936501509,0.697801167972428,3.05817920982241,16.881086606621,0.123766352960047,1.32558950291166,0,0,0,0,0,0.204000691244253,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0.087834785693126,0.0654895377488563,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,1.12135520028461,0,0,0,0,0.817309515567294,0,9.79499071615998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.62671520017326,1.24393266018445,0.252320850875628,0,0,0,0,0,0,17.6277132059367,15.5097914871854,22.6550368090473,17.2058597462535,19.827029412409,18.9816495288877,16.5842509037002,18.8372606520332,21.9305879459443,0.738155454624648,1.40241773803446,0.4115740113314,10.2906097969879,0,0,1.18157981336281,0,0,0,0,0,0.100528972411631,3.98130314181677,0.325808305310325,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,18.9917561887005,0,0,0.710783897485092,1.58390374586686,0,0,0,0,0,0,0,0,0,1.44781306667579,3.6985738059069,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0.613457458595699,0.500170521059677,0,0,0,0,0,0.300946099727719,0,1.03473071292505,0,0.184369168541703,0,2.74121620447837,25.0494699381925,0,0,0,8.48757200049526,4.99306318531491,12.3980020265169,0.248107807818777,0,0.841980283299221,0,0,0.321707842287215,4.45254199334973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.4120015221269,0,0.431831832204279,1.54227252690289,0,0.501689773854853,0,0,0,0,0,0,0,0,0.721287081534056,0.0915694648183434,0,0,0,0,0.96670718292122,2.31072925671967,2.14905144616581,3.03240459465967,1.18162269355101,1.45016693914229,0.681813019328807,2.49289699810865,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,4.70732886837312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.27947376023316,0,0,0,0,0.196498082026242,0,0,0,0.329294892959902,0.379473173765715,1.04980416073495,0,0,0,1.03558180854457,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,8.35605696581915,4.15750553165694,29.7945881036255,0,0,0,0,0.211125408127993,0.398495976502139,0,1.51159648712566,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0.796554137998498,0,0.945550727071745,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0.461701551022782,0,0,0.538545866458633,6.41019494339848,3.50901275705111,0.457987967009312,27.1847735769504,0,0,0,0,0.392125068635479,0,0,0,0,0,0,0,0,0.0884575645033392,3.05515072466813,0,0,0,0,24.8799070662625,0,0,0.19566461893209,0,0.394584402849391,6.04953580243319,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,1.39781334593624,0,0,0,0,0.193978032976839,0,1.58186518546373,0,0,0,0.195551382734803,0,0,21.7792474444522,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0.429226048136571,0.223171457441873,0.873385142327441,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.629455057619977,0,0,0,1.42939065274673,1.32418394073086,0,0,0,0,0,0,0,0,0.146552233678082,35.7768600062998,0,0,0,0,0.106787412567695,0.314408610199332,0.414239055347196,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.60024988196838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215649622793364,0,1.52893493468819,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0.917142992608395,11.4370409488835,0,0,0,0.300841313397029,0,0,27.5002029205494,0,0.295712172434091,0,0,0,0,0,0,0.992422356778588,0,0.383287282918786,0,0,0,0,3.99160665731875,0,0,0,0,0,0,0.078493092850514,0,1.68163297988273,30.1342377768134,0,0,0,0,0,0,0,0,0.3414369541879,0,0,0,0,0,0.4582137370881,0,0,0,0,0,0,1.02662806856247,38.2738762341606,1.45713297917742,0,0,0,0,0,0,0.0771741581079447,3.0598338470554,0,0,0.235676547101626,0,0,2.5359343655004,0,0,0.902410431630081,0,0.178553938605658,0,0,3.65168194123259,0.458729283404541,0,0,0.0679914901909147,0,5.290268405154,0.371995018166751,0,7.7872781182282,0,0.546327859818478,0.253397002022874,0,0,0,0,0,0.267964130156178,0,0,0.213233981900981,10.7128994158683,0,0.248298857183432,0,0.0636471582781649,4.85081253499726,3.48346796635138,47.9126621519393,0.202056159043763,0.286888821570705,10.6451314094724,0,0,0,0,25.81050366438,0,1.62758471326295,0,0.402547587182052,0 | |||
|short_description=p5@AF118081 | |||
}} |
Latest revision as of 06:57, 17 September 2015
Short description: | p5@AF118081 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_AF118081_5end |
Coexpression cluster: | C2119_tongue_liver_skeletal_amniotic_diaphragm_chorionic_Placental |
Association with transcript: | 409bp_to_AF118081_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.65e-17 | 19 |
cell of skeletal muscle | 7.46e-09 | 9 |
placental epithelial cell | 1.12e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
larynx | 6.29e-24 | 9 |
extraembryonic membrane | 7.94e-21 | 14 |
membranous layer | 7.94e-21 | 14 |
upper respiratory tract | 1.80e-18 | 19 |
extraembryonic structure | 1.98e-18 | 24 |
chorion | 2.96e-13 | 7 |
placenta | 6.95e-11 | 4 |
allantois | 6.95e-11 | 4 |
amnion | 2.08e-09 | 7 |
segment of respiratory tract | 2.52e-09 | 47 |
tongue | 7.37e-09 | 3 |
gustatory system | 7.37e-09 | 3 |
future tongue | 7.37e-09 | 3 |
somatic layer of lateral plate mesoderm | 3.56e-08 | 8 |
endoderm-derived structure | 3.59e-08 | 160 |
endoderm | 3.59e-08 | 160 |
presumptive endoderm | 3.59e-08 | 160 |
respiratory tract | 1.21e-07 | 54 |
subdivision of digestive tract | 2.92e-07 | 118 |
foregut | 4.28e-07 | 87 |