FFCP PHASE1:Hg19::chr11:2017395..2017407,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=4713 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=13bp_to_ENST00000442037_5end | |||
|cluster_id=chr11:2017395..2017407,- | |||
|coexpression_cluster_id=C227 | |||
|description=CAGE_peak_17_at_H19_5end | |||
|id=chr11:2017395..2017407,- | |||
|ontology_enrichment_celltype=CL:0000630!7.70e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000349;8.66e-17;19!CL:0002577;1.50e-07;3!CL:0002541;2.16e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,7.72e-17,19;CL:0002577,1.52e-07,3;CL:0002541,2.17e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!8.45e-13!14;UBERON:0000158!8.45e-13!14;UBERON:0001557!1.08e-12!19;UBERON:0001737!4.36e-11!9;UBERON:0003104!4.62e-11!238;UBERON:0009142!4.62e-11!238;UBERON:0000478!5.92e-11!24;UBERON:0004923!5.66e-10!57;UBERON:0003124!9.68e-10!7;UBERON:0000481!3.66e-09!347;UBERON:0000077!5.94e-07!130 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.81e-17;9!UBERON:0001557;2.81e-17;9!UBERON:0000478;5.48e-17;24!UBERON:0001134;4.11e-14;16!UBERON:0002036;4.11e-14;16!UBERON:0005631;2.15e-13;10!UBERON:0000158;2.15e-13;10!UBERON:0001987;2.59e-09;4!UBERON:0000305;4.97e-08;7!UBERON:0003124;2.16e-07;3!UBERON:0000920;2.16e-07;3!UBERON:0002385;5.37e-07;31!UBERON:0001015;5.37e-07;31!UBERON:0000383;5.37e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,8.61e-21,14;UBERON:0000158,8.61e-21,14;UBERON:0001737,2.95e-17,9;UBERON:0000478,4.86e-17,24;UBERON:0003124,4.88e-15,7;UBERON:0001557,5.41e-15,19;UBERON:0001987,2.55e-09,4;UBERON:0004340,2.55e-09,4;UBERON:0001041,1.51e-08,87;UBERON:0000305,5.03e-08,7;UBERON:0000072,9.45e-08,47;UBERON:0000920,2.17e-07,3;UBERON:0004119,5.40e-07,160;UBERON:0000925,5.40e-07,160;UBERON:0006595,5.40e-07,160;UBERON:0004921,5.89e-07,118;UBERON:0004871,6.14e-07,8;UBERON:0001723,7.38e-07,3;UBERON:0001033,7.38e-07,3;UBERON:0010056,7.38e-07,3 | |||
|phase1_expression=4.54195948176392,0.642301571672949,0.845726424575827,2.00146596706261,1.34088328328186,10.4680622892044,0,0,0.261185628199839,0.491467873003018,0,18.3490752589345,26.6404648010738,0.74259811776028,0.662794751455832,0,0,0,0,0,0,0.626909442956176,0,0,0.125542639594803,0,0,0,0,0,1.54816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0.383587685530591,0,0,0.434539556882471,0,3.40644409211845,0,0,0,0.196468613246569,0,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.60677600142307,0,0,0.622422070799533,0,0.163461903113459,0.302714855289863,9.79499071615998,0.468642863667593,0,0,0,0.23486899728753,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04574548582567,0.414644220061482,0.756962552626885,0,0,0,0,0,0,7.57163520255001,9.946496714608,5.06123162755312,7.83087206399997,9.36881609597346,7.1181185733329,8.49437241409036,5.49420102350969,10.0034260806062,0,1.40241773803446,1.6462960453256,10.2906097969879,0,0,2.36315962672562,0,0,0,0,0,0,4.81459914824354,0,0,0,0.34779121492523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,1.42977993658148,112.322672316029,1.64648067356154,0,1.42156779497018,0.791951872933429,0,0,0,0,0,0,0,0,0,2.89562613335158,2.26023954805422,1.79060963239896,0,0,0,0,0,0,0,0,0,0,0,0,1.34960640891054,0.500170521059677,0.271265023699736,0,0,0,0,1.20378439891088,0,5.17365356462525,0,0.184369168541703,0,6.2656370388077,17.1571711905428,0,0,0,49.4097941457403,66.5741758041988,39.0083478395288,1.98486246255021,0.61384789315225,3.64858122762996,0.256278298511402,0.511707249066704,0.804269605718038,7.42090332224955,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13733384070897,0.170093705276516,0.215915916102139,1.54227252690289,0.270946437543853,1.50506932156456,0,0,0,0,0,0,0,0,1.13345112812495,0,0,0,0,0,0.580024309752732,0.616194468458578,1.22802939780904,1.24052915236078,0.644521469209642,1.45016693914229,1.87498580315422,8.1019152438531,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,1.2655176988749,0.190630193923825,0,15.8337425572551,0,0,0.359744915166629,0,0,0,0,0,1.95053495635836,0,0,0,0,1.13008116620243,0,0,0,0,1.31178950409327,0,0,0,0.143411352204052,1.27723753317057,0,0,0.211107635297664,0,0.379473173765715,1.74967360122491,0,0,0,1.03558180854457,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0,0,109.344974009862,93.2469097814485,133.922066115265,0,0,0,0,0,0,0,3.27512572210559,0,0,0,0,0,0,0.887790650732402,0,0,0,0,0,0,0,0.724999575434793,0.1137934482855,0,1.41832609060762,0.344743373241465,0,0,0,0.120596438625408,0,0,0,0,0,0,0.461701551022782,0,0.23056390438806,8.25770328569904,5.54101596802241,136.851497524993,6.50342913153222,186.562171606522,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,52.9701247217201,0,0,0,0,0.394584402849391,2.41981432097328,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,1.92199335066233,0,0,0,0.0821154570532092,0.0969890164884194,0,3.38971111170799,0,0,0,0.391102765469606,0,0,57.1455483404892,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.229160424011684,1.43574604915363,0,0.429226048136571,0.223171457441873,2.62015542698232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,1.88836517285993,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,39.7520666736664,0,0,0,0,0.213574825135389,0.628817220398664,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300515217994437,0,0,0,0,0,0,17.6012216451788,0.686791410365586,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.11038630016486,0,3.23474434190045,0,1.31051565830417,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0,0.235939446695481,0.550285795565037,12.4767719442365,0,0,0,0.451261970095544,0,0,9.42864100133121,0,0.443568258651136,0,0,0,0,0,0.548257766857182,4.96211178389294,0,0,0,0,0,0,8.51542753561333,0,0.342976018874837,0,0,0,0,0.39246546425257,0,3.08299379645168,7.30526976407596,0,0,0.0714765441766563,0.158013611732727,0,0,0,0,0,0,0,0,0,1.27016115057279,2.2910686854405,0,0,0,0,0,7.12171720906684,2.87455859197492,18.5570309014112,0.971421986118279,0,0,0,0,0,0,0.0771741581079447,3.49695296806332,0,1.22574160876953,0,0,0,0,0,0,2.2560260790752,0,0.892769693028288,0,0,1.46067277649303,0,0,0.157771562193185,0,0,8.46442944824641,1.11598505450025,1.38652688589425,9.51778436672336,0,0.218531143927391,0.380095503034311,0,0,0,0,0.303114792872958,0.535928260312357,0,0,1.91910583710883,5.71354635512977,0.0645889098360061,0.496597714366863,0,0.12729431655633,3.23387502333151,1.95945073107265,33.1966302052723,0.26940821205835,0.0717222053926763,8.64916927019635,0.0814032686109745,0,0,0,14.0784565442073,0,6.91723503136755,0,0.402547587182052,0 | |||
|short_description=p17@H19 | |||
}} |
Latest revision as of 06:29, 17 September 2015
Short description: | p17@H19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_H19_5end |
Coexpression cluster: | C227_chorionic_amniotic_Mesenchymal_Placental_gastric_diaphragm_tongue |
Association with transcript: | 13bp_to_ENST00000442037_5end |
EntrezGene: | NA |
HGNC: | 4713 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 7.72e-17 | 19 |
placental epithelial cell | 1.52e-07 | 3 |
chorionic membrane mesenchymal stem cell | 2.17e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 8.61e-21 | 14 |
membranous layer | 8.61e-21 | 14 |
larynx | 2.95e-17 | 9 |
extraembryonic structure | 4.86e-17 | 24 |
chorion | 4.88e-15 | 7 |
upper respiratory tract | 5.41e-15 | 19 |
placenta | 2.55e-09 | 4 |
allantois | 2.55e-09 | 4 |
foregut | 1.51e-08 | 87 |
amnion | 5.03e-08 | 7 |
segment of respiratory tract | 9.45e-08 | 47 |
egg chorion | 2.17e-07 | 3 |
endoderm-derived structure | 5.40e-07 | 160 |
endoderm | 5.40e-07 | 160 |
presumptive endoderm | 5.40e-07 | 160 |
subdivision of digestive tract | 5.89e-07 | 118 |
somatic layer of lateral plate mesoderm | 6.14e-07 | 8 |
tongue | 7.38e-07 | 3 |
gustatory system | 7.38e-07 | 3 |
future tongue | 7.38e-07 | 3 |