FFCP PHASE1:Hg19::chr11:1982869..1982890,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:1982869..1982890,+ | |||
|coexpression_cluster_id=C360 | |||
|description=CAGE_peak_at_chr11:1982869..1982890,+ | |||
|id=chr11:1982869..1982890,+ | |||
|ontology_enrichment_celltype=CL:0000349!1.33e-60!3;CL:0002577!1.33e-60!3;CL:0002537!8.14e-17!5;CL:0000667!4.53e-14!6;CL:0000058!4.53e-14!6;CL:0000138!4.53e-14!6;CL:0002536!2.73e-11!2;CL:0000153!1.05e-09!9;CL:0000447!1.05e-09!9;CL:0002541!6.78e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0002577;2.33e-118;3!CL:0000349;3.17e-52;19!CL:0002536;6.30e-21;2!CL:0002537;3.35e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,2.33e-118,3;CL:0000349,3.17e-52,19;CL:0002536,6.96e-21,2;CL:0002537,3.22e-09,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!5.57e-69!14;UBERON:0000158!5.57e-69!14;UBERON:0003124!7.06e-46!7;UBERON:0001987!1.07e-45!4;UBERON:0004340!1.07e-45!4;UBERON:0000478!2.82e-40!24;UBERON:0000305!4.47e-26!7;UBERON:0004871!6.43e-23!8;UBERON:0004923!6.48e-17!57;UBERON:0000995!2.75e-09!21;UBERON:0005795!6.84e-09!22;UBERON:0003975!6.84e-09!22;UBERON:0000476!6.78e-08!3;UBERON:0000920!6.78e-08!3;UBERON:0004175!6.81e-08!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0001987;4.23e-89;4!UBERON:0000478;1.51e-41;24!UBERON:0000305;2.02e-23;7!UBERON:0005631;9.54e-17;10!UBERON:0000158;9.54e-17;10!UBERON:0000077;4.53e-14;27!UBERON:0000474;1.70e-08;37!UBERON:0003100;2.61e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001987,4.23e-89,4;UBERON:0004340,4.23e-89,4;UBERON:0005631,1.65e-70,14;UBERON:0000158,1.65e-70,14;UBERON:0003124,1.93e-51,7;UBERON:0000478,1.51e-41,24;UBERON:0000305,2.02e-23,7;UBERON:0004871,1.21e-20,8;UBERON:0000995,7.83e-18,21;UBERON:0005795,4.60e-17,22;UBERON:0003975,4.60e-17,22;UBERON:0004923,1.27e-15,66;UBERON:0004175,3.99e-15,25;UBERON:0000077,3.69e-13,29;UBERON:0003134,1.71e-10,37;UBERON:0000474,1.71e-10,37;UBERON:0003100,1.51e-09,41;UBERON:0006554,2.00e-08,47;UBERON:0003133,2.89e-08,48;UBERON:0001008,2.89e-08,48;UBERON:0005156,7.38e-07,59;UBERON:0000990,7.38e-07,59 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,1.31064823278103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.75942385747893,4.99306318531491,9.67648938654977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.78178808499583,0.307160702099232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:1982869..1982890,+ | |||
}} |
Latest revision as of 20:51, 23 July 2015
Short description: | p@chr11:1982869..1982890, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:1982869..1982890, + |
Coexpression cluster: | C360_Placental_Amniotic_amniotic_teratocarcinoma_chorionic_neuroblastoma_H9 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 2.33e-118 | 3 |
extraembryonic cell | 3.17e-52 | 19 |
amniotic epithelial cell | 6.96e-21 | 2 |
amnion mesenchymal stem cell | 3.22e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
placenta | 4.23e-89 | 4 |
allantois | 4.23e-89 | 4 |
extraembryonic membrane | 1.65e-70 | 14 |
membranous layer | 1.65e-70 | 14 |
chorion | 1.93e-51 | 7 |
extraembryonic structure | 1.51e-41 | 24 |
amnion | 2.02e-23 | 7 |
somatic layer of lateral plate mesoderm | 1.21e-20 | 8 |
uterus | 7.83e-18 | 21 |
embryonic uterus | 4.60e-17 | 22 |
internal female genitalia | 4.60e-17 | 22 |
organ component layer | 1.27e-15 | 66 |
internal genitalia | 3.99e-15 | 25 |
mixed endoderm/mesoderm-derived structure | 3.69e-13 | 29 |
female reproductive organ | 1.71e-10 | 37 |
female reproductive system | 1.71e-10 | 37 |
female organism | 1.51e-09 | 41 |
urinary system structure | 2.00e-08 | 47 |
reproductive organ | 2.89e-08 | 48 |
renal system | 2.89e-08 | 48 |
reproductive structure | 7.38e-07 | 59 |
reproductive system | 7.38e-07 | 59 |