FFCP PHASE1:Hg19::chr7:985435..985463,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr7:985435..985463,-
|short_description=p5@ADAP1
|description=CAGE_peak_5_at_ADAP1_5end
|association_with_transcript=0bp_to_ENST00000463358_5end
|EntrezGene=1...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=11033 | |EntrezGene=11033 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16486 | |HGNC=16486 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000463358_5end | |||
|cluster_id=chr7:985435..985463,- | |||
|description=CAGE_peak_5_at_ADAP1_5end | |||
|id=chr7:985435..985463,- | |||
|ontology_enrichment_celltype=CL:0000066!1.09e-13!254;CL:0000223!3.15e-10!59;CL:0002076!3.45e-10!43 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007297;1.41e-07;2!UBERON:0006595;4.77e-07;86 | |||
|ontology_enrichment_disease=DOID:305!1.16e-20!106;DOID:299!3.63e-13!25;DOID:0050687!1.34e-12!143;DOID:1749!4.46e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:299;3.02e-19;25!DOID:305;5.10e-08;106!DOID:5093;6.63e-08;4!DOID:1612;6.63e-08;4!DOID:3493;8.81e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:299,3.64e-19,25;DOID:305,2.06e-17,106;DOID:0050687,3.21e-12,143;DOID:5093,7.48e-08,4;DOID:1612,7.48e-08,4;DOID:3493,9.43e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0004119!5.59e-21!169;UBERON:0000925!5.59e-21!169;UBERON:0006595!5.59e-21!169;UBERON:0001007!3.85e-19!155;UBERON:0001555!3.85e-19!155;UBERON:0007026!3.85e-19!155;UBERON:0004921!9.38e-18!129;UBERON:0004185!9.38e-18!129;UBERON:0000077!2.78e-13!130;UBERON:0005409!4.07e-12!35;UBERON:0000160!2.67e-10!27;UBERON:0005911!4.73e-10!82;UBERON:0005153!9.12e-10!37;UBERON:0005156!2.47e-09!59;UBERON:0000990!2.47e-09!59;UBERON:0000466!5.58e-09!126;UBERON:0000344!5.75e-09!12;UBERON:0001041!2.03e-08!98;UBERON:0000464!8.63e-08!104;UBERON:0004175!1.30e-07!25;UBERON:0003101!1.38e-07!22;UBERON:0000079!1.38e-07!22;UBERON:0003133!1.49e-07!48;UBERON:0000059!3.95e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0005409;1.19e-25;22!UBERON:0000160;1.05e-20;17!UBERON:0004921;1.70e-18;33!UBERON:0000059;3.93e-14;11!UBERON:0004907;1.07e-10;5!UBERON:0006947;1.22e-10;3!UBERON:0004054;1.22e-10;3!UBERON:0001155;2.72e-09;9!UBERON:0001052;3.93e-08;4!UBERON:0005904;4.44e-08;4!UBERON:0001555;1.54e-07;54!UBERON:0002108;8.75e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,2.88e-22,25;UBERON:0000160,9.94e-21,17;UBERON:0000059,3.70e-14,11;UBERON:0001007,7.71e-14,145;UBERON:0001555,7.71e-14,145;UBERON:0007026,7.71e-14,145;UBERON:0004921,3.09e-12,118;UBERON:0004119,7.60e-12,160;UBERON:0000925,7.60e-12,160;UBERON:0006595,7.60e-12,160;UBERON:0006947,9.88e-11,3;UBERON:0004054,9.88e-11,3;UBERON:0004907,1.07e-10,5;UBERON:0001155,2.79e-09,9;UBERON:0001052,3.35e-08,4;UBERON:0005904,3.79e-08,4;UBERON:0002108,8.76e-07,4 | |||
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| ||
|short_description=p5@ADAP1 | |||
}} | }} |
Latest revision as of 07:42, 20 September 2015
Short description: | p5@ADAP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ADAP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000463358_5end |
EntrezGene: | ADAP1 |
HGNC: | 16486 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 2.88e-22 | 25 |
intestine | 9.94e-21 | 17 |
large intestine | 3.70e-14 | 11 |
digestive system | 7.71e-14 | 145 |
digestive tract | 7.71e-14 | 145 |
primitive gut | 7.71e-14 | 145 |
subdivision of digestive tract | 3.09e-12 | 118 |
endoderm-derived structure | 7.60e-12 | 160 |
endoderm | 7.60e-12 | 160 |
presumptive endoderm | 7.60e-12 | 160 |
male genital duct | 9.88e-11 | 3 |
internal male genitalia | 9.88e-11 | 3 |
lower digestive tract | 1.07e-10 | 5 |
colon | 2.79e-09 | 9 |
rectum | 3.35e-08 | 4 |
duct of male reproductive system | 3.79e-08 | 4 |
small intestine | 8.76e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
adenocarcinoma | 3.64e-19 | 25 |
carcinoma | 2.06e-17 | 106 |
cell type cancer | 3.21e-12 | 143 |
thoracic cancer | 7.48e-08 | 4 |
breast cancer | 7.48e-08 | 4 |
signet ring cell adenocarcinoma | 9.43e-08 | 2 |