FFCP PHASE1:Hg19::chr7:96633570..96633579,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:96633570..96633579,-
|short_description=p6@DLX6-AS1
|description=CAGE_peak_6_at_DLX6-AS1_5end
|association_with_transcript=30bp_to_ENST00000431497,uc003uok...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=285987 | |EntrezGene=285987 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=37151 | |HGNC=37151 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=30bp_to_ENST00000431497,uc003uok.2_5end | |||
|cluster_id=chr7:96633570..96633579,- | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_6_at_DLX6-AS1_5end | |||
|id=chr7:96633570..96633579,- | |||
|ontology_enrichment_celltype=CL:0000047!6.28e-12!8 | |||
|ontology_enrichment_celltype_v019=CL:0000540;4.24e-14;6!CL:0000404;4.24e-14;6!CL:0000047;3.52e-11;2!CL:0002319;3.40e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,9.34e-23,8;CL:0000540,3.97e-14,6;CL:0000031,3.97e-14,6;CL:0000404,3.97e-14,6;CL:0002319,3.37e-07,25 | |||
|ontology_enrichment_development_v019=UBERON:0006222;5.71e-21;1!CL:0000031;4.24e-14;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001893!6.38e-66!34;UBERON:0002780!1.73e-65!41;UBERON:0001890!1.73e-65!41;UBERON:0006240!1.73e-65!41;UBERON:0003080!7.46e-64!42;UBERON:0001869!1.10e-63!32;UBERON:0002791!1.30e-61!33;UBERON:0002020!6.44e-54!34;UBERON:0003528!6.44e-54!34;UBERON:0002619!9.46e-52!22;UBERON:0001950!1.35e-49!20;UBERON:0001017!6.61e-47!82;UBERON:0001049!4.42e-46!57;UBERON:0005068!4.42e-46!57;UBERON:0006241!4.42e-46!57;UBERON:0007135!4.42e-46!57;UBERON:0000956!2.05e-45!25;UBERON:0000203!2.05e-45!25;UBERON:0005743!1.61e-44!86;UBERON:0002616!2.21e-44!59;UBERON:0003056!8.58e-43!61;UBERON:0000955!2.77e-40!69;UBERON:0006238!2.77e-40!69;UBERON:0000073!7.27e-40!94;UBERON:0001016!7.27e-40!94;UBERON:0003075!4.37e-29!86;UBERON:0007284!4.37e-29!86;UBERON:0002346!1.37e-27!90;UBERON:0001871!1.33e-24!7;UBERON:0000153!2.12e-23!129;UBERON:0007811!2.12e-23!129;UBERON:0000033!9.98e-23!123;UBERON:0002420!3.00e-22!9;UBERON:0007245!3.00e-22!9;UBERON:0010009!3.00e-22!9;UBERON:0010011!3.00e-22!9;UBERON:0000454!3.00e-22!9;UBERON:0004121!1.01e-21!169;UBERON:0000924!4.26e-21!173;UBERON:0006601!4.26e-21!173;UBERON:0007023!1.25e-18!115;UBERON:0000349!3.06e-18!5;UBERON:0000200!1.05e-14!6;UBERON:0000369!1.93e-13!4;UBERON:0002435!1.93e-13!4;UBERON:0000204!1.93e-13!4;UBERON:0010082!1.93e-13!4;UBERON:0009663!2.95e-13!7;UBERON:0001876!2.49e-12!2;UBERON:0002021!4.37e-11!5;UBERON:0001872!7.01e-11!5;UBERON:0002308!2.46e-10!9;UBERON:0000125!2.46e-10!9;UBERON:0000025!2.88e-10!194;UBERON:0005383!1.43e-08!3;UBERON:0005382!1.43e-08!3;UBERON:0002771!3.90e-08!3;UBERON:0004111!2.40e-07!241;UBERON:0001874!4.01e-07!1;UBERON:0001882!5.06e-07!1;UBERON:0005403!5.06e-07!1;UBERON:0003112!5.37e-07!1;UBERON:0000032!5.37e-07!1;UBERON:0005253!5.37e-07!1;UBERON:0003128!5.37e-07!1;UBERON:0002241!5.37e-07!1;UBERON:0001703!5.37e-07!1;UBERON:0004761!5.37e-07!1;UBERON:0009617!5.37e-07!1;UBERON:0000477!6.37e-07!286;UBERON:0002581!6.38e-07!1;UBERON:0002022!7.15e-07!1;UBERON:0000064!9.78e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0002021;1.03e-16;5!UBERON:0001950;1.71e-15;20!UBERON:0002619;3.49e-14;22!UBERON:0000956;1.36e-12;25!UBERON:0000203;1.36e-12;25!UBERON:0002780;4.95e-11;41!UBERON:0001890;4.95e-11;41!UBERON:0002791;8.94e-10;32!UBERON:0001869;1.20e-09;32!UBERON:0003528;1.83e-08;34!UBERON:0002020;1.83e-08;34!UBERON:0001893;2.44e-08;34!UBERON:0002114;4.68e-08;2!UBERON:0000922;1.05e-07;49!UBERON:0000073;4.86e-07;53!UBERON:0002616;4.86e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.12e-16,5;UBERON:0001950,1.77e-15,20;UBERON:0001017,6.87e-15,81;UBERON:0002619,3.62e-14,22;UBERON:0001016,2.12e-13,89;UBERON:0000956,1.40e-12,25;UBERON:0000203,1.40e-12,25;UBERON:0002780,6.33e-12,41;UBERON:0001890,6.33e-12,41;UBERON:0003080,6.33e-12,41;UBERON:0006240,6.33e-12,41;UBERON:0002791,5.47e-10,32;UBERON:0001869,5.47e-10,32;UBERON:0003528,1.95e-09,34;UBERON:0002020,1.95e-09,34;UBERON:0001893,1.95e-09,34;UBERON:0000073,2.67e-09,53;UBERON:0002616,2.67e-09,53;UBERON:0001049,8.17e-09,56;UBERON:0005068,8.17e-09,56;UBERON:0006241,8.17e-09,56;UBERON:0007135,8.17e-09,56;UBERON:0003056,4.15e-08,61;UBERON:0002114,4.84e-08,2;UBERON:0000955,3.47e-07,68;UBERON:0006238,3.47e-07,68;UBERON:0004121,6.99e-07,171;UBERON:0000924,6.99e-07,171;UBERON:0006601,6.99e-07,171 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76228387266739,1.30139853857622,0,1.50764638800914,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.422008249231538,0,0,8.86726714137573,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463840490809256,0,0,0,0,0,0,0,0,0,0,0,0.482385754501632,0,0,0,0,0,0,0,0,0,0.179515288819544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,1.40558667435203,0,0,0,0,0,5.81538247097931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379864775735272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408610218334727,0,0,0,0,0,0.425246896606173,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0.250381861413,0,0,0,0,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.578063025868136,1.41696576325585,0,0.615349092722265,1.00828678488687,0,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202612753855184,0,0,0.443910671357348,7.65764732625507,0,0,0,0,0,0,0,0,0,0,0,0,0.460409414939944,0,0,0,0.785577949580009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271965960763659,8.29066311646717,0,0,0,0,0.126166424835079,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76228387266739,1.30139853857622,0,1.50764638800914,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.422008249231538,0,0,8.86726714137573,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463840490809256,0,0,0,0,0,0,0,0,0,0,0,0.482385754501632,0,0,0,0,0,0,0,0,0,0.179515288819544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,1.40558667435203,0,0,0,0,0,5.81538247097931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379864775735272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408610218334727,0,0,0,0,0,0.425246896606173,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0.250381861413,0,0,0,0,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.578063025868136,1.41696576325585,0,0.615349092722265,1.00828678488687,0,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202612753855184,0,0,0.443910671357348,7.65764732625507,0,0,0,0,0,0,0,0,0,0,0,0,0.460409414939944,0,0,0,0.785577949580009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271965960763659,8.29066311646717,0,0,0,0,0.126166424835079,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p6@DLX6-AS1 | |||
}} | }} |
Latest revision as of 05:54, 20 September 2015
Short description: | p6@DLX6-AS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_DLX6-AS1_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 30bp_to_ENST00000431497, uc003uok.2_5end |
EntrezGene: | DLX6-AS1 |
HGNC: | 37151 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 9.34e-23 | 8 |
neuron | 3.97e-14 | 6 |
neuroblast | 3.97e-14 | 6 |
electrically signaling cell | 3.97e-14 | 6 |
neural cell | 3.37e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
occipital lobe | 1.12e-16 | 5 |
neocortex | 1.77e-15 | 20 |
central nervous system | 6.87e-15 | 81 |
regional part of cerebral cortex | 3.62e-14 | 22 |
nervous system | 2.12e-13 | 89 |
cerebral cortex | 1.40e-12 | 25 |
pallium | 1.40e-12 | 25 |
regional part of forebrain | 6.33e-12 | 41 |
forebrain | 6.33e-12 | 41 |
anterior neural tube | 6.33e-12 | 41 |
future forebrain | 6.33e-12 | 41 |
regional part of telencephalon | 5.47e-10 | 32 |
cerebral hemisphere | 5.47e-10 | 32 |
brain grey matter | 1.95e-09 | 34 |
gray matter | 1.95e-09 | 34 |
telencephalon | 1.95e-09 | 34 |
regional part of nervous system | 2.67e-09 | 53 |
regional part of brain | 2.67e-09 | 53 |
neural tube | 8.17e-09 | 56 |
neural rod | 8.17e-09 | 56 |
future spinal cord | 8.17e-09 | 56 |
neural keel | 8.17e-09 | 56 |
pre-chordal neural plate | 4.15e-08 | 61 |
duodenum | 4.84e-08 | 2 |
brain | 3.47e-07 | 68 |
future brain | 3.47e-07 | 68 |
ectoderm-derived structure | 6.99e-07 | 171 |
ectoderm | 6.99e-07 | 171 |
presumptive ectoderm | 6.99e-07 | 171 |