FFCP PHASE1:Hg19::chr7:38357258..38357299,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:38357258..38357299,-
|short_description=p2@TARP
|description=CAGE_peak_2_at_TARP_5end
|association_with_transcript=289bp_to_uc003tge.1_5end
|EntrezGene=44...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=445347 | |EntrezGene=445347 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=289bp_to_uc003tge.1_5end | |||
|cluster_id=chr7:38357258..38357299,- | |||
|coexpression_cluster_id=C1996 | |||
|description=CAGE_peak_2_at_TARP_5end | |||
|id=chr7:38357258..38357299,- | |||
|ontology_enrichment_celltype=CL:0000037!5.83e-21!172;CL:0000566!5.83e-21!172;CL:0000988!9.89e-19!182;CL:0002032!9.88e-18!165;CL:0000837!9.88e-18!165;CL:0000625!1.61e-17!11;CL:0000738!1.48e-15!140;CL:0000791!9.56e-14!18;CL:0000789!9.56e-14!18;CL:0002420!9.56e-14!18;CL:0002419!9.56e-14!18;CL:0000790!9.56e-14!18;CL:0002087!1.72e-12!119;CL:0002031!1.03e-11!124;CL:0000084!1.23e-11!25;CL:0000827!1.23e-11!25;CL:0000763!2.66e-10!112;CL:0000049!2.66e-10!112;CL:0000838!4.25e-08!52;CL:0000542!7.77e-08!53;CL:0000051!7.77e-08!53 | |||
|ontology_enrichment_celltype_v019=CL:0000625;8.85e-36;11!CL:0000791;7.00e-30;18!CL:0000789;7.00e-30;18!CL:0002419;7.00e-30;18!CL:0000084;7.41e-24;25!CL:0000623;1.36e-11;3!CL:0000226;3.59e-11;3!CL:0000842;3.59e-11;3!CL:0000767;3.91e-11;3!CL:0000542;8.24e-09;53!CL:0002087;2.62e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,6.35e-36,11;CL:0000791,5.66e-30,18;CL:0000789,5.66e-30,18;CL:0002420,5.66e-30,18;CL:0002419,5.66e-30,18;CL:0000790,5.66e-30,18;CL:0000037,3.18e-25,168;CL:0000084,7.44e-24,25;CL:0000827,7.44e-24,25;CL:0000988,1.98e-23,177;CL:0000738,1.64e-21,136;CL:0002032,9.93e-21,161;CL:0000837,9.93e-21,161;CL:0002087,3.75e-20,115;CL:0000838,4.12e-15,52;CL:0000542,9.55e-15,53;CL:0000051,9.55e-15,53;CL:0002031,1.11e-14,120;CL:0000623,1.34e-11,3;CL:0000825,1.34e-11,3;CL:0000226,2.68e-11,3;CL:0000842,2.68e-11,3;CL:0000767,4.48e-11,3;CL:0000893,1.69e-08,2;CL:0002489,1.69e-08,2;CL:0000809,1.69e-08,2;CL:0000808,1.69e-08,2;CL:0000894,1.69e-08,2;CL:0000806,1.69e-08,2;CL:0000807,1.69e-08,2;CL:0000805,1.69e-08,2;CL:0002425,1.69e-08,2;CL:0000763,3.84e-08,108;CL:0000049,3.84e-08,108;CL:0000134,7.64e-07,354 | |||
|ontology_enrichment_development_v019=CL:0000790;7.00e-30;18!CL:0000051;8.24e-09;53!CL:0002425;1.63e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.62e-20!115;UBERON:0000178!9.49e-15!15;UBERON:0000179!9.49e-15!15;UBERON:0000463!9.49e-15!15;UBERON:0002390!1.06e-14!102;UBERON:0003061!1.06e-14!102;UBERON:0002193!5.25e-14!112;UBERON:0004177!1.94e-08!7;UBERON:0002370!2.09e-07!4;UBERON:0005058!2.09e-07!4;UBERON:0009113!2.09e-07!4;UBERON:0003295!2.09e-07!4;UBERON:0005562!2.09e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.23e-31;15!UBERON:0000179;2.23e-31;15!UBERON:0000463;2.23e-31;15!UBERON:0002390;1.92e-27;32!UBERON:0002193;1.48e-14;42!UBERON:0004177;2.43e-10;5!UBERON:0005057;2.43e-10;5!UBERON:0002370;2.12e-07;2!UBERON:0005058;2.12e-07;2!UBERON:0009113;2.12e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.99e-31,15;UBERON:0000179,1.99e-31,15;UBERON:0000463,1.99e-31,15;UBERON:0002390,1.34e-24,98;UBERON:0003061,1.34e-24,98;UBERON:0002193,1.30e-21,108;UBERON:0004177,7.38e-17,7;UBERON:0005057,7.38e-17,7;UBERON:0002370,3.99e-14,4;UBERON:0005058,3.99e-14,4;UBERON:0009113,3.99e-14,4;UBERON:0003295,3.99e-14,4;UBERON:0005562,3.99e-14,4;UBERON:0003081,1.38e-09,203;UBERON:0003351,2.00e-09,6;UBERON:0002405,7.66e-08,93 | |||
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| ||
|short_description=p2@TARP | |||
}} | }} |
Latest revision as of 12:33, 18 September 2015
Short description: | p2@TARP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TARP_5end |
Coexpression cluster: | C1996_Natural_CD8_NK_CD4_Peripheral_blood_Whole |
Association with transcript: | 289bp_to_uc003tge.1_5end |
EntrezGene: | TARP |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood | 1.99e-31 | 15 |
haemolymphatic fluid | 1.99e-31 | 15 |
organism substance | 1.99e-31 | 15 |
hematopoietic system | 1.34e-24 | 98 |
blood island | 1.34e-24 | 98 |
hemolymphoid system | 1.30e-21 | 108 |
hemopoietic organ | 7.38e-17 | 7 |
immune organ | 7.38e-17 | 7 |
thymus | 3.99e-14 | 4 |
hemolymphoid system gland | 3.99e-14 | 4 |
thymic region | 3.99e-14 | 4 |
pharyngeal gland | 3.99e-14 | 4 |
thymus primordium | 3.99e-14 | 4 |
lateral plate mesoderm | 1.38e-09 | 203 |
pharyngeal epithelium | 2.00e-09 | 6 |
immune system | 7.66e-08 | 93 |