FFCP PHASE1:Hg19::chr7:150549595..150549614,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr7:150549595..150549614,+
|short_description=p1@ABP1
|description=CAGE_peak_1_at_ABP1_5end
|association_with_transcript=0bp_to_ENST00000416793,ENST00000437714...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=26 | |EntrezGene=26 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=80 | |HGNC=80 | ||
|TSSclassifier=strong | |||
|UniProt=C9J690,E7ER24,C9J2J4 | |UniProt=C9J690,E7ER24,C9J2J4 | ||
|association_with_transcript=0bp_to_ENST00000416793,ENST00000437714,ENST00000483043_5end | |||
|cluster_id=chr7:150549595..150549614,+ | |||
|coexpression_cluster_id=C50 | |||
|description=CAGE_peak_1_at_ABP1_5end | |||
|id=chr7:150549595..150549614,+ | |||
|ontology_enrichment_celltype=CL:0000990!8.38e-09!8;CL:0000453!8.86e-08!5;CL:0000451!7.99e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000453;1.19e-12;5!CL:0000990;3.60e-09;8!CL:0002541;9.29e-09;3!CL:0000451;2.42e-07;10!CL:0002178;6.41e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000453,1.12e-12,5;CL:0000990,3.53e-09,8;CL:0002541,9.30e-09,3;CL:0000451,2.38e-07,10;CL:0002178,6.09e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3119;4.19e-09;14!DOID:299;2.14e-08;25 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,4.05e-09,14;DOID:299,1.90e-08,25 | |||
|ontology_enrichment_uberon=UBERON:0005409!5.98e-11!35;UBERON:0002390!2.12e-08!102;UBERON:0003061!2.12e-08!102;UBERON:0002193!6.46e-08!112;UBERON:0000160!8.99e-08!27;UBERON:0004921!7.17e-07!129;UBERON:0004185!7.17e-07!129;UBERON:0004119!8.66e-07!169;UBERON:0000925!8.66e-07!169;UBERON:0006595!8.66e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0005409;1.21e-22;22!UBERON:0000160;3.90e-17;17!UBERON:0004921;5.58e-16;33!UBERON:0000059;5.59e-10;11!UBERON:0003124;9.29e-09;3!UBERON:0000920;9.29e-09;3!UBERON:0002108;2.56e-08;4!UBERON:0004907;8.71e-08;5!UBERON:0000945;3.90e-07;5!UBERON:0010039;3.90e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,1.58e-19,25;UBERON:0000160,3.80e-17,17;UBERON:0000059,5.44e-10,11;UBERON:0000920,9.30e-09,3;UBERON:0002108,2.54e-08,4;UBERON:0004907,8.41e-08,5 | |||
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| ||
|short_description=p1@ABP1 | |||
}} | }} |
Latest revision as of 04:13, 17 September 2015
Short description: | p1@ABP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ABP1_5end |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | 0bp_to_ENST00000416793, ENST00000437714, ENST00000483043_5end |
EntrezGene: | ABP1 |
HGNC: | 80 |
UniProt: | C9J690E7ER24C9J2J4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 1.12e-12 | 5 |
conventional dendritic cell | 3.53e-09 | 8 |
chorionic membrane mesenchymal stem cell | 9.30e-09 | 3 |
dendritic cell | 2.38e-07 | 10 |
epithelial cell of stomach | 6.09e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 1.58e-19 | 25 |
intestine | 3.80e-17 | 17 |
large intestine | 5.44e-10 | 11 |
egg chorion | 9.30e-09 | 3 |
small intestine | 2.54e-08 | 4 |
lower digestive tract | 8.41e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 4.05e-09 | 14 |
adenocarcinoma | 1.90e-08 | 25 |