FFCP PHASE1:Hg19::chr7:141900897..141900901,+: Difference between revisions
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|id=chr7:141900897..141900901,+
|short_description=p@chr7:141900897..141900901,+
|description=CAGE_peak_at_chr7:141900897..141900901,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr7:141900897..141900901,+ | |||
|coexpression_cluster_id=C690 | |||
|description=CAGE_peak_at_chr7:141900897..141900901,+ | |||
|id=chr7:141900897..141900901,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0000358;3.15e-26;1!UBERON:0006298;7.62e-26;1!UBERON:0008801;7.62e-26;1!UBERON:0005062;1.80e-07;4!UBERON:0007284;1.80e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001829!2.34e-11!2;UBERON:0003127!2.72e-10!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;8.49e-50;2!UBERON:0001831;7.62e-26;1!UBERON:0001736;7.62e-26;1!UBERON:0002134;7.62e-26;1!UBERON:0005208;7.62e-26;1!UBERON:0004145;7.62e-26;1!UBERON:0005946;7.62e-26;1!UBERON:0001567;7.62e-26;1!UBERON:0005965;7.62e-26;1!UBERON:0002078;7.62e-26;1!UBERON:0001044;2.19e-17;6!UBERON:0003293;2.19e-17;6!UBERON:0003294;2.19e-17;6!UBERON:0010047;2.19e-17;6!UBERON:0003408;2.19e-17;6!UBERON:0000167;2.19e-17;6!UBERON:0004921;3.29e-17;33!UBERON:0002081;1.21e-13;2!UBERON:0002133;1.21e-13;2!UBERON:0004089;1.21e-13;2!UBERON:0000160;4.54e-13;17!UBERON:0001155;5.08e-12;9!UBERON:0005409;2.23e-10;22!UBERON:0000059;5.17e-10;11!UBERON:0003978;1.53e-09;3!UBERON:0004151;1.53e-09;3!UBERON:0000946;1.53e-09;3!UBERON:0001041;5.18e-08;14!UBERON:0001555;5.92e-08;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,8.50e-50,2;UBERON:0001736,4.61e-26,1;UBERON:0006298,4.61e-26,1;UBERON:0002134,9.79e-26,1;UBERON:0005208,9.79e-26,1;UBERON:0005946,9.79e-26,1;UBERON:0005965,9.79e-26,1;UBERON:0002078,9.79e-26,1;UBERON:0001831,1.26e-25,1;UBERON:0001567,1.26e-25,1;UBERON:0008801,1.26e-25,1;UBERON:0001044,2.19e-17,6;UBERON:0003293,2.19e-17,6;UBERON:0003294,2.19e-17,6;UBERON:0010047,2.19e-17,6;UBERON:0000167,2.19e-17,6;UBERON:0002081,1.37e-13,2;UBERON:0002133,1.37e-13,2;UBERON:0010227,1.37e-13,2;UBERON:0004089,1.55e-13,2;UBERON:0000160,4.27e-13,17;UBERON:0001155,4.94e-12,9;UBERON:0003408,7.67e-11,10;UBERON:0000059,5.06e-10,11;UBERON:0003978,1.67e-09,3;UBERON:0009751,1.67e-09,3;UBERON:0004151,1.67e-09,3;UBERON:0000946,1.67e-09,3;UBERON:0002523,1.67e-09,3;UBERON:0005983,1.67e-09,3;UBERON:0004145,1.67e-09,3;UBERON:0002165,1.67e-09,3;UBERON:0002062,1.67e-09,3;UBERON:0007280,1.67e-09,3;UBERON:0005409,2.82e-09,25 | |||
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|short_description=p@chr7:141900897..141900901,+ | |||
}} | }} |
Latest revision as of 06:50, 31 July 2015
Short description: | p@chr7:141900897..141900901, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:141900897..141900901, + |
Coexpression cluster: | C690_duodenum_small_temporal_gall_colon_Neurons_Hepatocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
major salivary gland | 8.50e-50 | 2 |
submandibular gland | 4.61e-26 | 1 |
submandibular gland primordium | 4.61e-26 | 1 |
tricuspid valve | 9.79e-26 | 1 |
right atrium valve | 9.79e-26 | 1 |
outflow tract of atrium | 9.79e-26 | 1 |
outflow part of right atrium | 9.79e-26 | 1 |
right cardiac atrium | 9.79e-26 | 1 |
parotid gland | 1.26e-25 | 1 |
cheek | 1.26e-25 | 1 |
parotid gland primordium | 1.26e-25 | 1 |
saliva-secreting gland | 2.19e-17 | 6 |
gland of oral region | 2.19e-17 | 6 |
gland of foregut | 2.19e-17 | 6 |
oral gland | 2.19e-17 | 6 |
oral cavity | 2.19e-17 | 6 |
cardiac atrium | 1.37e-13 | 2 |
atrioventricular valve | 1.37e-13 | 2 |
future cardiac atrium | 1.37e-13 | 2 |
midface | 1.55e-13 | 2 |
intestine | 4.27e-13 | 17 |
colon | 4.94e-12 | 9 |
gland of gut | 7.67e-11 | 10 |
large intestine | 5.06e-10 | 11 |
valve | 1.67e-09 | 3 |
cardiac mesenchyme | 1.67e-09 | 3 |
cardiac chamber | 1.67e-09 | 3 |
cardial valve | 1.67e-09 | 3 |
tunica intima | 1.67e-09 | 3 |
heart layer | 1.67e-09 | 3 |
outflow tract | 1.67e-09 | 3 |
endocardium | 1.67e-09 | 3 |
endocardial cushion | 1.67e-09 | 3 |
presumptive endocardium | 1.67e-09 | 3 |
gastrointestinal system | 2.82e-09 | 25 |