FFCP PHASE1:Hg19::chr7:116859072..116859089,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr7:116859072..116859089,+
|short_description=p8@ST7
|description=CAGE_peak_8_at_ST7_5end
|association_with_transcript=0bp_to_ENST00000464020_5end
|EntrezGene...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7982 | |EntrezGene=7982 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11351 | |HGNC=11351 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000464020_5end | |||
|cluster_id=chr7:116859072..116859089,+ | |||
|coexpression_cluster_id=C68 | |||
|description=CAGE_peak_8_at_ST7_5end | |||
|id=chr7:116859072..116859089,+ | |||
|ontology_enrichment_celltype=CL:1000306!1.76e-13!4;CL:0002547!1.76e-13!4;CL:0002537!6.81e-12!5;CL:0000349!7.61e-12!3;CL:0002577!7.61e-12!3;CL:0002536!4.16e-08!2;CL:0002588!2.54e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000349;6.13e-40;19!CL:0002577;5.32e-30;3!CL:0002536;1.40e-19;2!CL:0002537;2.63e-18;5!CL:1000306;2.85e-10;4!CL:0002547;2.85e-10;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,5.61e-40,19;CL:0002577,5.07e-30,3;CL:0002536,1.16e-19,2;CL:0002537,2.63e-18,5;CL:1000306,3.78e-10,4;CL:0002547,3.78e-10,4 | |||
|ontology_enrichment_development_v019=UBERON:0000358;6.76e-11;1!UBERON:0003124;1.15e-10;1 | |||
|ontology_enrichment_disease=DOID:3307!3.75e-08!2 | |||
|ontology_enrichment_disease_v019=DOID:3307;1.40e-19;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,8.72e-20,2 | |||
|ontology_enrichment_uberon=UBERON:0005631!3.52e-29!14;UBERON:0000158!3.52e-29!14;UBERON:0000478!9.60e-26!24;UBERON:0000305!4.12e-18!7;UBERON:0004871!9.44e-16!8;UBERON:0004923!3.40e-15!57;UBERON:0001987!5.65e-15!4;UBERON:0004340!5.65e-15!4;UBERON:0000415!1.76e-13!4;UBERON:0007240!1.76e-13!4;UBERON:0005742!1.76e-13!4;UBERON:0005734!1.76e-13!4;UBERON:0004664!1.76e-13!4;UBERON:0004663!1.76e-13!4;UBERON:0003124!5.79e-13!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;1.06e-46;24!UBERON:0001987;7.30e-39;4!UBERON:0005631;3.35e-34;10!UBERON:0000158;3.35e-34;10!UBERON:0000305;3.61e-34;7!UBERON:0004797;2.85e-10;4!UBERON:0000415;2.85e-10;4!UBERON:0007240;2.85e-10;4!UBERON:0005742;2.85e-10;4!UBERON:0005734;2.85e-10;4!UBERON:0004664;2.85e-10;4!UBERON:0004663;2.85e-10;4!UBERON:0000077;8.69e-09;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,4.86e-67,14;UBERON:0000158,4.86e-67,14;UBERON:0000478,1.14e-46,24;UBERON:0001987,9.78e-39,4;UBERON:0004340,9.78e-39,4;UBERON:0003124,2.40e-34,7;UBERON:0000305,3.16e-34,7;UBERON:0004871,5.91e-30,8;UBERON:0004923,6.08e-19,66;UBERON:0000415,3.78e-10,4;UBERON:0007240,3.78e-10,4;UBERON:0005742,3.78e-10,4;UBERON:0005734,3.78e-10,4;UBERON:0004664,3.78e-10,4;UBERON:0004663,3.78e-10,4;UBERON:0000077,3.93e-08,29;UBERON:0000995,1.45e-07,21;UBERON:0005795,3.16e-07,22;UBERON:0003975,3.16e-07,22 | |||
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| ||
|short_description=p8@ST7 | |||
}} | }} |
Latest revision as of 19:31, 15 September 2015
Short description: | p8@ST7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_ST7_5end |
Coexpression cluster: | C68_amniotic_chorionic_Placental_salivary_placenta_tongue_mesothelioma |
Association with transcript: | 0bp_to_ENST00000464020_5end |
EntrezGene: | ST7 |
HGNC: | 11351 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 5.61e-40 | 19 |
placental epithelial cell | 5.07e-30 | 3 |
amniotic epithelial cell | 1.16e-19 | 2 |
amnion mesenchymal stem cell | 2.63e-18 | 5 |
fibroblast of tunica adventitia of artery | 3.78e-10 | 4 |
fibroblast of the aortic adventitia | 3.78e-10 | 4 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 4.86e-67 | 14 |
membranous layer | 4.86e-67 | 14 |
extraembryonic structure | 1.14e-46 | 24 |
placenta | 9.78e-39 | 4 |
allantois | 9.78e-39 | 4 |
chorion | 2.40e-34 | 7 |
amnion | 3.16e-34 | 7 |
somatic layer of lateral plate mesoderm | 5.91e-30 | 8 |
organ component layer | 6.08e-19 | 66 |
artery wall | 3.78e-10 | 4 |
tunica adventitia of artery | 3.78e-10 | 4 |
adventitia | 3.78e-10 | 4 |
tunica adventitia of blood vessel | 3.78e-10 | 4 |
aorta tunica adventitia | 3.78e-10 | 4 |
aorta wall | 3.78e-10 | 4 |
mixed endoderm/mesoderm-derived structure | 3.93e-08 | 29 |
uterus | 1.45e-07 | 21 |
embryonic uterus | 3.16e-07 | 22 |
internal female genitalia | 3.16e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
teratoma | 8.72e-20 | 2 |