FFCP PHASE1:Hg19::chr6:98264524..98264558,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:98264524..98264558,+
|short_description=p@chr6:98264524..98264558,+
|description=CAGE_peak_at_chr6:98264524..98264558,+
|association_with_transcript=NA
|E...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr6:98264524..98264558,+ | |||
|coexpression_cluster_id=C919 | |||
|description=CAGE_peak_at_chr6:98264524..98264558,+ | |||
|id=chr6:98264524..98264558,+ | |||
|ontology_enrichment_celltype=CL:0000047!2.12e-12!8;CL:0002605!5.82e-12!3;CL:0002319!5.89e-08!25 | |||
|ontology_enrichment_celltype_v019=CL:0000047;5.44e-12;2!CL:0002319;4.44e-09;25!CL:0000540;7.37e-09;6!CL:0000404;7.37e-09;6!CL:0002605;2.62e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,4.33e-17,8;CL:0002319,4.42e-09,25;CL:0000540,7.37e-09,6;CL:0000031,7.37e-09,6;CL:0000404,7.37e-09,6;CL:0002605,2.58e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.01e-11;82!UBERON:0010122;1.03e-11;2!CL:0000031;7.37e-09;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002780!1.91e-105!41;UBERON:0001890!1.91e-105!41;UBERON:0006240!1.91e-105!41;UBERON:0003080!8.72e-103!42;UBERON:0001049!2.03e-101!57;UBERON:0005068!2.03e-101!57;UBERON:0006241!2.03e-101!57;UBERON:0007135!2.03e-101!57;UBERON:0001893!5.68e-101!34;UBERON:0001869!5.89e-101!32;UBERON:0001017!2.00e-99!82;UBERON:0005743!2.06e-98!86;UBERON:0002616!1.03e-97!59;UBERON:0002791!2.06e-97!33;UBERON:0000955!1.14e-89!69;UBERON:0006238!1.14e-89!69;UBERON:0002020!2.26e-88!34;UBERON:0003528!2.26e-88!34;UBERON:0000073!2.69e-88!94;UBERON:0001016!2.69e-88!94;UBERON:0000956!3.66e-83!25;UBERON:0000203!3.66e-83!25;UBERON:0002619!1.21e-72!22;UBERON:0003056!1.57e-72!61;UBERON:0003075!3.64e-71!86;UBERON:0007284!3.64e-71!86;UBERON:0002346!1.36e-67!90;UBERON:0001950!6.21e-66!20;UBERON:0000033!1.55e-51!123;UBERON:0000153!1.06e-48!129;UBERON:0007811!1.06e-48!129;UBERON:0004121!4.05e-45!169;UBERON:0000924!7.56e-44!173;UBERON:0006601!7.56e-44!173;UBERON:0007023!4.10e-43!115;UBERON:0000025!2.96e-23!194;UBERON:0001871!5.72e-22!7;UBERON:0000200!7.33e-22!6;UBERON:0002420!1.30e-19!9;UBERON:0007245!1.30e-19!9;UBERON:0010009!1.30e-19!9;UBERON:0010011!1.30e-19!9;UBERON:0000454!1.30e-19!9;UBERON:0001872!1.29e-18!5;UBERON:0000349!1.55e-18!5;UBERON:0002021!2.98e-18!5;UBERON:0004111!7.65e-17!241;UBERON:0000369!8.61e-16!4;UBERON:0002435!8.61e-16!4;UBERON:0000204!8.61e-16!4;UBERON:0010082!8.61e-16!4;UBERON:0000064!6.59e-15!219;UBERON:0000477!1.27e-13!286;UBERON:0009663!2.87e-13!7;UBERON:0000483!1.01e-12!309;UBERON:0000119!1.67e-12!312;UBERON:0005383!2.37e-12!3;UBERON:0005382!2.37e-12!3;UBERON:0002771!1.01e-11!3;UBERON:0000475!9.95e-11!365;UBERON:0002308!3.02e-10!9;UBERON:0000125!3.02e-10!9;UBERON:0004733!1.36e-09!12;UBERON:0002028!1.36e-09!12;UBERON:0007277!1.36e-09!12;UBERON:0001873!8.18e-09!2;UBERON:0010122!8.18e-09!2;UBERON:0004732!8.27e-09!13;UBERON:0000481!8.40e-09!347;UBERON:0001870!9.52e-09!2;UBERON:0001876!1.55e-08!2;UBERON:0001954!2.91e-08!2;UBERON:0003022!2.91e-08!2;UBERON:0002421!2.91e-08!2;UBERON:0002600!2.91e-08!2;UBERON:0001894!3.22e-08!7;UBERON:0006222!3.22e-08!7;UBERON:0001897!3.76e-08!2;UBERON:0003076!1.48e-07!15;UBERON:0003057!1.48e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;3.17e-97;32!UBERON:0002791;7.68e-91;32!UBERON:0000956;8.20e-91;25!UBERON:0000203;8.20e-91;25!UBERON:0001893;3.17e-89;34!UBERON:0003528;6.83e-87;34!UBERON:0002020;6.83e-87;34!UBERON:0002619;2.45e-84;22!UBERON:0001950;3.83e-75;20!UBERON:0002780;4.08e-61;41!UBERON:0001890;4.08e-61;41!UBERON:0000073;1.28e-41;53!UBERON:0002616;1.28e-41;53!UBERON:0001017;1.52e-30;75!UBERON:0000200;3.11e-30;6!UBERON:0000955;2.95e-28;68!UBERON:0001871;1.25e-25;6!UBERON:0001872;1.27e-25;5!UBERON:0000349;5.20e-25;5!UBERON:0001016;3.81e-23;83!UBERON:0000369;1.71e-21;4!UBERON:0002435;1.71e-21;4!UBERON:0000204;1.71e-21;4!UBERON:0002420;2.20e-20;9!UBERON:0007245;2.20e-20;9!UBERON:0010009;2.20e-20;9!UBERON:0010011;2.20e-20;9!UBERON:0000454;2.20e-20;9!UBERON:0005383;1.08e-16;3!UBERON:0005382;1.08e-16;3!UBERON:0001870;2.37e-16;3!UBERON:0009663;2.40e-12;7!UBERON:0001873;1.03e-11;2!UBERON:0002702;1.54e-11;2!UBERON:0002771;4.15e-11;2!UBERON:0001876;4.15e-11;2!UBERON:0001954;7.48e-11;2!UBERON:0003022;7.48e-11;2!UBERON:0002421;7.48e-11;2!UBERON:0002600;7.48e-11;2!UBERON:0002021;5.52e-10;5!UBERON:0000125;1.27e-09;9!UBERON:0002308;1.27e-09;9!UBERON:0011216;3.82e-09;132!UBERON:0007023;7.84e-09;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,3.67e-108,32;UBERON:0001893,1.18e-101,34;UBERON:0002791,4.94e-100,32;UBERON:0003528,5.34e-94,34;UBERON:0002020,5.34e-94,34;UBERON:0000956,1.10e-90,25;UBERON:0000203,1.10e-90,25;UBERON:0002780,2.34e-90,41;UBERON:0001890,2.34e-90,41;UBERON:0003080,2.34e-90,41;UBERON:0006240,2.34e-90,41;UBERON:0002619,3.39e-84,22;UBERON:0001017,9.20e-79,81;UBERON:0001950,6.29e-75,20;UBERON:0000073,3.86e-74,53;UBERON:0002616,3.86e-74,53;UBERON:0001016,2.09e-70,89;UBERON:0001049,6.40e-70,56;UBERON:0005068,6.40e-70,56;UBERON:0006241,6.40e-70,56;UBERON:0007135,6.40e-70,56;UBERON:0000955,3.11e-64,68;UBERON:0006238,3.11e-64,68;UBERON:0003056,2.63e-59,61;UBERON:0003075,4.07e-46,82;UBERON:0007284,4.07e-46,82;UBERON:0002346,1.02e-43,86;UBERON:0010371,3.57e-35,104;UBERON:0004121,4.97e-34,171;UBERON:0000924,4.97e-34,171;UBERON:0006601,4.97e-34,171;UBERON:0000200,5.36e-30,6;UBERON:0010314,1.31e-28,132;UBERON:0011216,6.00e-28,223;UBERON:0007023,1.52e-26,114;UBERON:0001871,1.20e-25,6;UBERON:0001872,1.92e-25,5;UBERON:0000349,2.48e-25,5;UBERON:0000369,1.76e-21,4;UBERON:0002435,1.76e-21,4;UBERON:0000204,1.76e-21,4;UBERON:0010082,1.76e-21,4;UBERON:0002420,1.62e-20,9;UBERON:0007245,1.62e-20,9;UBERON:0010009,1.62e-20,9;UBERON:0010011,1.62e-20,9;UBERON:0000454,1.62e-20,9;UBERON:0005383,1.17e-16,3;UBERON:0005382,1.17e-16,3;UBERON:0001870,2.19e-16,3;UBERON:0000025,2.49e-16,192;UBERON:0009663,2.44e-12,7;UBERON:0004111,7.49e-12,240;UBERON:0001873,1.04e-11,2;UBERON:0010122,1.04e-11,2;UBERON:0002702,1.58e-11,2;UBERON:0001876,2.54e-11,2;UBERON:0002771,5.23e-11,2;UBERON:0001954,6.10e-11,2;UBERON:0003022,6.10e-11,2;UBERON:0002421,6.10e-11,2;UBERON:0002600,6.10e-11,2;UBERON:0002021,5.79e-10,5;UBERON:0000125,1.29e-09,9;UBERON:0002308,1.29e-09,9;UBERON:0000483,5.41e-08,306;UBERON:0000119,7.39e-08,309;UBERON:0000923,6.77e-07,560;UBERON:0010316,6.77e-07,560;UBERON:0005291,6.77e-07,560;UBERON:0006598,6.77e-07,560;UBERON:0010317,6.77e-07,560;UBERON:0002532,6.77e-07,560;UBERON:0002050,8.56e-07,564 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.8806194208976,4.51685602740518,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.35236560556159,5.20559415430487,7.73288812777695,5.69555302136786,12.7587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98244294329889,1.82870241333667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93866549219044,1.48428957058962,0,0,0,0,0,0,0,0,0,0,3.54296554325536,3.37670028151142,1.52581736317083,0.110579259931225,0.295547618953547,1.53569778007781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606610196826093,0,0.937057782901357,0,0,0,0,0,3.67287313956588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.72236422610278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59045937961861,1.63444087333891,0,0,0,0,0,2.06548492637284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.54427271986794,2.07444650333337,2.3786276834235,0.573409195690071,0.221858103073705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52084279766904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6976274540513,2.8339315265117,1.43670473151436,0.615349092722265,10.8390829375339,0.829887029570615,1.77623210195036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4988906308806,3.12431239445539,1.44680757550829,1.71222687523548,15.8622694615284,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0.0679697329768317,1.31545547125698,0,0,0,3.29942738823604,0,0,0,0,0.285906176706625,0,0.697448552208751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29183831362738,6.10890966476528,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48750831837634,0.413731983447581,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.8806194208976,4.51685602740518,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.35236560556159,5.20559415430487,7.73288812777695,5.69555302136786,12.7587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98244294329889,1.82870241333667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93866549219044,1.48428957058962,0,0,0,0,0,0,0,0,0,0,3.54296554325536,3.37670028151142,1.52581736317083,0.110579259931225,0.295547618953547,1.53569778007781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606610196826093,0,0.937057782901357,0,0,0,0,0,3.67287313956588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.72236422610278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59045937961861,1.63444087333891,0,0,0,0,0,2.06548492637284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.54427271986794,2.07444650333337,2.3786276834235,0.573409195690071,0.221858103073705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52084279766904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6976274540513,2.8339315265117,1.43670473151436,0.615349092722265,10.8390829375339,0.829887029570615,1.77623210195036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4988906308806,3.12431239445539,1.44680757550829,1.71222687523548,15.8622694615284,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0.0679697329768317,1.31545547125698,0,0,0,3.29942738823604,0,0,0,0,0.285906176706625,0,0.697448552208751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29183831362738,6.10890966476528,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48750831837634,0.413731983447581,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr6:98264524..98264558,+ | |||
}} | }} |
Latest revision as of 03:56, 31 July 2015
Short description: | p@chr6:98264524..98264558, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:98264524..98264558, + |
Coexpression cluster: | C919_Neurons_Neural_parietal_Astrocyte_duodenum_occipital_temporal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 4.33e-17 | 8 |
neural cell | 4.42e-09 | 25 |
neuron | 7.37e-09 | 6 |
neuroblast | 7.37e-09 | 6 |
electrically signaling cell | 7.37e-09 | 6 |
astrocyte of the cerebral cortex | 2.58e-08 | 3 |