FFCP PHASE1:Hg19::chr6:64516227..64516239,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:64516227..64516239,-
|short_description=p3@EYS
|description=CAGE_peak_3_at_EYS_5end
|association_with_transcript=-94bp_to_ENST00000486069_5end
|EntrezGene...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=346007 | |EntrezGene=346007 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21555 | |HGNC=21555 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-94bp_to_ENST00000486069_5end | |||
|cluster_id=chr6:64516227..64516239,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_3_at_EYS_5end | |||
|id=chr6:64516227..64516239,- | |||
|ontology_enrichment_celltype=CL:0000223!3.33e-12!59;CL:0000066!6.15e-12!254;CL:0002076!1.70e-07!43 | |||
|ontology_enrichment_celltype_v019=CL:0000182;5.74e-27;12!CL:0002231;7.76e-08;3!CL:0000307;7.76e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,5.19e-27,12;CL:0000223,2.91e-12,58;CL:0000068,7.76e-08,3;CL:0000069,7.76e-08,3;CL:0000307,7.76e-08,3;CL:0000377,7.76e-08,3;CL:0002231,8.29e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0009497;2.03e-14;13!UBERON:0001041;6.19e-11;30!CL:0000223;1.98e-09;58!UBERON:0004161;3.76e-08;11!UBERON:0009847;5.73e-08;3!UBERON:0003353;5.73e-08;3!CL:0000377;7.76e-08;3 | |||
|ontology_enrichment_disease=DOID:305!3.27e-12!106;DOID:0050687!2.08e-09!143 | |||
|ontology_enrichment_disease_v019=DOID:4556;7.76e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:4556,7.26e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0001007!7.42e-19!155;UBERON:0001555!7.42e-19!155;UBERON:0007026!7.42e-19!155;UBERON:0004119!1.98e-18!169;UBERON:0000925!1.98e-18!169;UBERON:0006595!1.98e-18!169;UBERON:0005911!3.80e-18!82;UBERON:0004921!4.32e-16!129;UBERON:0004185!4.32e-16!129;UBERON:0003929!7.90e-14!54;UBERON:0000077!4.02e-13!130;UBERON:0003104!7.29e-11!238;UBERON:0009142!7.29e-11!238;UBERON:0005153!9.18e-11!37;UBERON:0001041!1.52e-10!98;UBERON:0008947!2.68e-10!38;UBERON:0003258!2.68e-10!38;UBERON:0002100!1.77e-09!216;UBERON:0001004!3.92e-09!72;UBERON:0002367!1.58e-08!11;UBERON:0010147!1.58e-08!11;UBERON:0009846!1.58e-08!11;UBERON:0003353!1.58e-08!11;UBERON:0004902!1.58e-08!11;UBERON:0003820!1.58e-08!11;UBERON:0009847!1.58e-08!11;UBERON:0000065!2.01e-08!53;UBERON:0005177!6.56e-08!107;UBERON:0000162!7.82e-08!14;UBERON:0001353!7.82e-08!14;UBERON:0000163!7.82e-08!14;UBERON:0006866!7.82e-08!14;UBERON:0000164!7.82e-08!14;UBERON:0000931!7.82e-08!14;UBERON:0009497!9.71e-08!25;UBERON:0000015!9.71e-08!25;UBERON:0002423!9.71e-08!25;UBERON:0006235!9.71e-08!25;UBERON:0004161!9.71e-08!25;UBERON:0003937!1.14e-07!12;UBERON:0005399!1.14e-07!12;UBERON:0000481!1.37e-07!347;UBERON:0000161!2.57e-07!35;UBERON:0004122!3.56e-07!15;UBERON:0005256!4.72e-07!143;UBERON:0007499!6.80e-07!25;UBERON:0008835!9.80e-07!22;UBERON:0003894!9.80e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0002423;1.32e-28;25!UBERON:0002107;2.58e-26;19!UBERON:0006925;2.58e-26;19!UBERON:0002365;9.32e-17;31!UBERON:0002330;9.32e-17;31!UBERON:0002368;1.85e-13;33!UBERON:0002530;9.06e-11;57!UBERON:0000949;1.19e-08;43!UBERON:0005172;3.80e-08;52!UBERON:0005173;3.80e-08;52!UBERON:0002367;3.83e-08;11!UBERON:0010147;3.83e-08;11!UBERON:0003937;1.54e-07;12!UBERON:0005399;1.54e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0008835,1.68e-32,22;UBERON:0003894,1.68e-32,22;UBERON:0009854,4.28e-31,23;UBERON:0007499,1.28e-28,25;UBERON:0009497,1.28e-28,25;UBERON:0000015,1.28e-28,25;UBERON:0002423,1.28e-28,25;UBERON:0006235,1.28e-28,25;UBERON:0004161,1.28e-28,25;UBERON:0009856,1.60e-27,26;UBERON:0002107,2.45e-26,19;UBERON:0006925,2.45e-26,19;UBERON:0008836,2.45e-26,19;UBERON:0003929,3.31e-23,54;UBERON:0005911,3.35e-19,82;UBERON:0002530,2.77e-16,59;UBERON:0002365,3.09e-16,31;UBERON:0002330,3.09e-16,31;UBERON:0004921,3.14e-16,118;UBERON:0002368,2.11e-14,35;UBERON:0001041,2.76e-14,87;UBERON:0001007,3.78e-13,145;UBERON:0001555,3.78e-13,145;UBERON:0007026,3.78e-13,145;UBERON:0004119,7.01e-12,160;UBERON:0000925,7.01e-12,160;UBERON:0006595,7.01e-12,160;UBERON:0000949,3.11e-11,45;UBERON:0005256,4.30e-10,122;UBERON:0002100,1.63e-09,199;UBERON:0005177,2.11e-09,101;UBERON:0005172,2.23e-09,54;UBERON:0005173,2.23e-09,54;UBERON:0009569,1.90e-08,112;UBERON:0002417,1.90e-08,60;UBERON:0000916,1.90e-08,60;UBERON:0011216,2.87e-08,223;UBERON:0000490,3.05e-08,148;UBERON:0002367,4.04e-08,11;UBERON:0010147,4.04e-08,11;UBERON:0009846,4.04e-08,11;UBERON:0003353,4.04e-08,11;UBERON:0004902,4.04e-08,11;UBERON:0003820,4.04e-08,11;UBERON:0009847,4.04e-08,11;UBERON:0003104,1.37e-07,160;UBERON:0009142,1.37e-07,160;UBERON:0001048,1.40e-07,160;UBERON:0003937,1.62e-07,12;UBERON:0005399,1.62e-07,12 | |||
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|short_description=p3@EYS | |||
}} | }} |
Latest revision as of 13:04, 19 September 2015
Short description: | p3@EYS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_EYS_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -94bp_to_ENST00000486069_5end |
EntrezGene: | EYS |
HGNC: | 21555 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 5.19e-27 | 12 |
endodermal cell | 2.91e-12 | 58 |
duct epithelial cell | 7.76e-08 | 3 |
branched duct epithelial cell | 7.76e-08 | 3 |
tracheal epithelial cell | 7.76e-08 | 3 |
tracheoblast | 7.76e-08 | 3 |
epithelial cell of prostate | 8.29e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
lung large cell carcinoma | 7.26e-08 | 3 |