FFCP PHASE1:Hg19::chr6:123957986..123957997,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:123957986..123957997,-
|short_description=p5@TRDN
|description=CAGE_peak_5_at_TRDN_5end
|association_with_transcript=-44bp_to_ENST00000333613,ENST000003981...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10345 | |EntrezGene=10345 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12261 | |HGNC=12261 | ||
|TSSclassifier=strong | |||
|UniProt=E9PEX4,Q13061,F5H5I1,Q8IVK2,Q6NSB8 | |UniProt=E9PEX4,Q13061,F5H5I1,Q8IVK2,Q6NSB8 | ||
|association_with_transcript=-44bp_to_ENST00000333613,ENST00000398178,ENST00000543022,uc003pzj.1,uc003pzk.1,uc003pzl.1,uc010ken.2,uc010keo.1_5end | |||
|cluster_id=chr6:123957986..123957997,- | |||
|coexpression_cluster_id=C31 | |||
|description=CAGE_peak_5_at_TRDN_5end | |||
|id=chr6:123957986..123957997,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004874;8.17e-10;1!UBERON:0010227;1.61e-09;1!UBERON:0010226;1.61e-09;1 | |||
|ontology_enrichment_disease=DOID:114!4.51e-08!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p5@TRDN | |||
}} | }} |
Latest revision as of 06:16, 20 September 2015
Short description: | p5@TRDN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_TRDN_5end |
Coexpression cluster: | C31_skeletal_tongue_diaphragm_throat_penis_skin_trachea |
Association with transcript: | -44bp_to_ENST00000333613, ENST00000398178, ENST00000543022, uc003pzj.1, uc003pzk.1, uc003pzl.1, uc010ken.2, uc010keo.1_5end |
EntrezGene: | TRDN |
HGNC: | 12261 |
UniProt: | E9PEX4Q13061F5H5I1Q8IVK2Q6NSB8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data