FFCP PHASE1:Hg19::chr5:75379186..75379220,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr5:75379186..75379220,+
|short_description=p1@SV2C
|description=CAGE_peak_1_at_SV2C_5end
|association_with_transcript=-18bp_to_ENST00000322285_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=22987 | |EntrezGene=22987 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30670 | |HGNC=30670 | ||
|TSSclassifier=strong | |||
|UniProt=Q496J9 | |UniProt=Q496J9 | ||
|association_with_transcript=-18bp_to_ENST00000322285_5end | |||
|cluster_id=chr5:75379186..75379220,+ | |||
|coexpression_cluster_id=C35 | |||
|description=CAGE_peak_1_at_SV2C_5end | |||
|id=chr5:75379186..75379220,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000333;4.32e-11;5 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.12e-19;82!UBERON:0006241;2.02e-07;3!UBERON:0003057;2.02e-07;3!UBERON:0006215;6.81e-07;3!UBERON:0002532;9.72e-07;206!UBERON:0010316;9.72e-07;206 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:169;3.70e-09;6!DOID:171;2.14e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:169,3.49e-09,6;DOID:171,2.06e-07,10 | |||
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|short_description=p1@SV2C | |||
}} | }} |
Latest revision as of 17:48, 18 September 2015
Short description: | p1@SV2C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SV2C_5end |
Coexpression cluster: | C35_caudate_putamen_diencephalon_nucleus_globus_thalamus_insula |
Association with transcript: | -18bp_to_ENST00000322285_5end |
EntrezGene: | SV2C |
HGNC: | 30670 |
UniProt: | Q496J9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 3.49e-09 | 6 |
neuroectodermal tumor | 2.06e-07 | 10 |