FFCP PHASE1:Hg19::chr5:59064649..59064691,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:59064649..59064691,-
|short_description=p2@PDE4D
|description=CAGE_peak_2_at_PDE4D_5end
|association_with_transcript=-178bp_to_ENST00000507116_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5144 | |EntrezGene=5144 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8783 | |HGNC=8783 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-178bp_to_ENST00000507116_5end | |||
|cluster_id=chr5:59064649..59064691,- | |||
|description=CAGE_peak_2_at_PDE4D_5end | |||
|id=chr5:59064649..59064691,- | |||
|ontology_enrichment_celltype=CL:0002139!7.06e-08!24;CL:0000066!7.39e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0002139;7.70e-09;24!CL:0000349;5.53e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,6.35e-09,24;CL:0000349,3.34e-07,19;CL:0000066,3.64e-07,253 | |||
|ontology_enrichment_development_v019=UBERON:0008947;4.69e-13;29 | |||
|ontology_enrichment_disease=DOID:305!1.11e-08!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.04e-09,106;DOID:0050687,6.62e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0000477!5.94e-11!286;UBERON:0001007!6.58e-11!155;UBERON:0001555!6.58e-11!155;UBERON:0007026!6.58e-11!155;UBERON:0004921!7.23e-11!129;UBERON:0004185!7.23e-11!129;UBERON:0004119!8.79e-11!169;UBERON:0000925!8.79e-11!169;UBERON:0006595!8.79e-11!169;UBERON:0000077!5.42e-09!130;UBERON:0000481!2.92e-08!347;UBERON:0001737!2.89e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;9.22e-09;9!UBERON:0001557;9.22e-09;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004921,5.92e-14,118;UBERON:0001007,3.07e-12,145;UBERON:0001555,3.07e-12,145;UBERON:0007026,3.07e-12,145;UBERON:0004119,1.99e-11,160;UBERON:0000925,1.99e-11,160;UBERON:0006595,1.99e-11,160;UBERON:0001737,9.58e-09,9;UBERON:0001041,1.07e-08,87;UBERON:0008947,1.08e-08,38;UBERON:0003258,1.08e-08,38;UBERON:0005631,4.92e-07,14;UBERON:0000158,4.92e-07,14;UBERON:0005409,6.58e-07,25;UBERON:0000065,8.68e-07,54 | |||
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| ||
|short_description=p2@PDE4D | |||
}} | }} |
Latest revision as of 07:57, 18 September 2015
Short description: | p2@PDE4D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PDE4D_5end |
Coexpression cluster: | NA |
Association with transcript: | -178bp_to_ENST00000507116_5end |
EntrezGene: | PDE4D |
HGNC: | 8783 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 6.35e-09 | 24 |
extraembryonic cell | 3.34e-07 | 19 |
epithelial cell | 3.64e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
subdivision of digestive tract | 5.92e-14 | 118 |
digestive system | 3.07e-12 | 145 |
digestive tract | 3.07e-12 | 145 |
primitive gut | 3.07e-12 | 145 |
endoderm-derived structure | 1.99e-11 | 160 |
endoderm | 1.99e-11 | 160 |
presumptive endoderm | 1.99e-11 | 160 |
larynx | 9.58e-09 | 9 |
foregut | 1.07e-08 | 87 |
respiratory primordium | 1.08e-08 | 38 |
endoderm of foregut | 1.08e-08 | 38 |
extraembryonic membrane | 4.92e-07 | 14 |
membranous layer | 4.92e-07 | 14 |
gastrointestinal system | 6.58e-07 | 25 |
respiratory tract | 8.68e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.04e-09 | 106 |
cell type cancer | 6.62e-07 | 143 |