FFCP PHASE1:Hg19::chr5:2752422..2752438,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:2752422..2752438,+
|short_description=p5@C5orf38
|description=CAGE_peak_5_at_C5orf38_5end
|association_with_transcript=160bp_to_uc011cmh.1,uc011cmi.1,uc011...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=153571 | |EntrezGene=153571 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24226 | |HGNC=24226 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=160bp_to_uc011cmh.1,uc011cmi.1,uc011cmj.1_5end | |||
|cluster_id=chr5:2752422..2752438,+ | |||
|coexpression_cluster_id=C2821 | |||
|description=CAGE_peak_5_at_C5orf38_5end | |||
|id=chr5:2752422..2752438,+ | |||
|ontology_enrichment_celltype=CL:0002620!2.86e-13!23;CL:0002251!5.55e-11!21;CL:0002076!7.54e-10!43;CL:0000057!1.24e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0002623;3.03e-14;3!CL:0000349;5.23e-14;19!CL:0002251;1.26e-10;20!CL:0000622;9.87e-09;5!CL:0002537;1.20e-08;5!CL:0000154;2.41e-07;6!CL:0002577;3.07e-07;3!CL:0002541;5.98e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002623,1.89e-14,3;CL:0000349,4.88e-14,19;CL:0002251,1.04e-10,20;CL:0000622,7.47e-09,5;CL:0002537,1.27e-08,5;CL:0000154,1.91e-07,6;CL:0002577,2.98e-07,3;CL:0002541,4.71e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!8.92e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:5093;2.58e-11;4!DOID:1612;2.58e-11;4!DOID:4556;1.96e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,2.50e-11,4;DOID:1612,2.50e-11,4;DOID:4556,2.06e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0003102!1.38e-15!95;UBERON:0002199!1.55e-13!45;UBERON:0002416!1.55e-13!45;UBERON:0002097!2.30e-12!40;UBERON:0003076!2.40e-09!15;UBERON:0003057!2.40e-09!15;UBERON:0003124!1.00e-08!7;UBERON:0004923!1.14e-08!57;UBERON:0001044!2.26e-08!6;UBERON:0003293!2.26e-08!6;UBERON:0003294!2.26e-08!6;UBERON:0010047!2.26e-08!6;UBERON:0000167!2.26e-08!6;UBERON:0004732!4.64e-08!13;UBERON:0005631!8.02e-08!14;UBERON:0000158!8.02e-08!14;UBERON:0004733!4.60e-07!12;UBERON:0002028!4.60e-07!12;UBERON:0007277!4.60e-07!12;UBERON:0002680!7.70e-07!9;UBERON:0001895!7.70e-07!9;UBERON:0010092!7.70e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001044;2.41e-12;6!UBERON:0003293;2.41e-12;6!UBERON:0003294;2.41e-12;6!UBERON:0010047;2.41e-12;6!UBERON:0003408;2.41e-12;6!UBERON:0000167;2.41e-12;6!UBERON:0003343;1.46e-11;4!UBERON:0004785;1.46e-11;4!UBERON:0000161;3.76e-11;19!UBERON:0000166;3.76e-11;19!UBERON:0005631;4.53e-11;10!UBERON:0000158;4.53e-11;10!UBERON:0000478;7.99e-11;24!UBERON:0000974;7.70e-08;6!UBERON:0000165;2.99e-07;28!UBERON:0003124;5.98e-07;3!UBERON:0000920;5.98e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,3.87e-15,14;UBERON:0000158,3.87e-15,14;UBERON:0001044,1.85e-12,6;UBERON:0003293,1.85e-12,6;UBERON:0003294,1.85e-12,6;UBERON:0010047,1.85e-12,6;UBERON:0000167,1.85e-12,6;UBERON:0003343,1.38e-11,4;UBERON:0004785,1.38e-11,4;UBERON:0003124,7.41e-11,7;UBERON:0000478,7.58e-11,24;UBERON:0000166,1.48e-09,22;UBERON:0004923,6.22e-09,66;UBERON:0003408,1.69e-07,10;UBERON:0000920,4.71e-07,3;UBERON:0000165,5.18e-07,29;UBERON:0000930,5.18e-07,29 | |||
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| ||
|short_description=p5@C5orf38 | |||
}} | }} |
Latest revision as of 14:09, 17 September 2015
Short description: | p5@C5orf38 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_C5orf38_5end |
Coexpression cluster: | C2821_oral_large_pancreatic_Mesenchymal_keratoacanthoma_choriocarcinoma_breast |
Association with transcript: | 160bp_to_uc011cmh.1, uc011cmi.1, uc011cmj.1_5end |
EntrezGene: | C5orf38 |
HGNC: | 24226 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 1.89e-14 | 3 |
extraembryonic cell | 4.88e-14 | 19 |
epithelial cell of alimentary canal | 1.04e-10 | 20 |
acinar cell | 7.47e-09 | 5 |
amnion mesenchymal stem cell | 1.27e-08 | 5 |
protein secreting cell | 1.91e-07 | 6 |
placental epithelial cell | 2.98e-07 | 3 |
chorionic membrane mesenchymal stem cell | 4.71e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 3.87e-15 | 14 |
membranous layer | 3.87e-15 | 14 |
saliva-secreting gland | 1.85e-12 | 6 |
gland of oral region | 1.85e-12 | 6 |
gland of foregut | 1.85e-12 | 6 |
oral gland | 1.85e-12 | 6 |
oral cavity | 1.85e-12 | 6 |
mucosa of oral region | 1.38e-11 | 4 |
respiratory system mucosa | 1.38e-11 | 4 |
chorion | 7.41e-11 | 7 |
extraembryonic structure | 7.58e-11 | 24 |
oral opening | 1.48e-09 | 22 |
organ component layer | 6.22e-09 | 66 |
gland of gut | 1.69e-07 | 10 |
egg chorion | 4.71e-07 | 3 |
mouth | 5.18e-07 | 29 |
stomodeum | 5.18e-07 | 29 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 2.50e-11 | 4 |
breast cancer | 2.50e-11 | 4 |
lung large cell carcinoma | 2.06e-07 | 3 |