FFCP PHASE1:Hg19::chr5:147648290..147648301,+: Difference between revisions
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|id=chr5:147648290..147648301,+
|short_description=p4@SPINK13
|description=CAGE_peak_4_at_SPINK13_5end
|association_with_transcript=8bp_to_uc003lpc.2,uc010jgt.2_5en...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=153218 | |EntrezGene=153218 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27200 | |HGNC=27200 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=8bp_to_uc003lpc.2,uc010jgt.2_5end | |||
|cluster_id=chr5:147648290..147648301,+ | |||
|coexpression_cluster_id=C106 | |||
|description=CAGE_peak_4_at_SPINK13_5end | |||
|id=chr5:147648290..147648301,+ | |||
|ontology_enrichment_celltype=CL:0002573!5.51e-09!2;CL:0002601!2.21e-07!1 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;3.68e-36;29!UBERON:0007297;1.22e-27;2!UBERON:0005754;2.11e-14;1 | |||
|ontology_enrichment_disease=DOID:305!1.14e-08!106;DOID:14566!6.45e-07!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.05e-11,106;DOID:0050687,3.73e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0001737!6.52e-56!9;UBERON:0001557!1.02e-25!19;UBERON:0006947!6.54e-20!3;UBERON:0004054!6.54e-20!3;UBERON:0005904!4.52e-15!4;UBERON:0003135!4.26e-14!11;UBERON:0008947!4.22e-12!38;UBERON:0003258!4.22e-12!38;UBERON:0000072!9.84e-10!46;UBERON:0004175!1.61e-08!25;UBERON:0000065!3.00e-08!53;UBERON:0001301!6.59e-08!1;UBERON:0001000!8.00e-08!1;UBERON:0005352!8.00e-08!1;UBERON:0002113!1.32e-07!27;UBERON:0003918!1.32e-07!27;UBERON:0005095!1.32e-07!27;UBERON:0007687!1.32e-07!27;UBERON:0000998!1.33e-07!1;UBERON:0006868!1.33e-07!1;UBERON:0000473!2.02e-07!8;UBERON:0003133!4.06e-07!48;UBERON:0001004!5.35e-07!72;UBERON:0003101!6.37e-07!22;UBERON:0000079!6.37e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;5.70e-118;9!UBERON:0001557;5.70e-118;9!UBERON:0006947;1.07e-40;3!UBERON:0004054;1.07e-40;3!UBERON:0005904;9.96e-31;4!UBERON:0000072;3.00e-26;37!UBERON:0000065;3.79e-22;44!UBERON:0004175;9.97e-16;21!UBERON:0001301;4.73e-15;1!UBERON:0001000;6.66e-15;1!UBERON:0005352;6.66e-15;1!UBERON:0000998;2.11e-14;1!UBERON:0006868;2.11e-14;1!UBERON:0000058;1.07e-12;10!UBERON:0001004;1.24e-11;65!UBERON:0003135;1.34e-11;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,5.33e-118,9;UBERON:0001557,1.40e-55,19;UBERON:0006947,1.14e-40,3;UBERON:0004054,1.14e-40,3;UBERON:0005904,1.05e-30,4;UBERON:0008947,2.04e-27,38;UBERON:0003258,2.04e-27,38;UBERON:0000072,5.23e-22,47;UBERON:0000065,4.83e-19,54;UBERON:0001301,4.73e-15,1;UBERON:0001000,7.13e-15,1;UBERON:0005352,7.13e-15,1;UBERON:0000998,2.11e-14,1;UBERON:0006868,2.11e-14,1;UBERON:0001004,1.20e-13,74;UBERON:0004175,3.22e-13,25;UBERON:0003135,1.37e-11,11;UBERON:0001041,1.82e-11,87;UBERON:0004921,4.11e-08,118;UBERON:0001048,3.61e-07,160;UBERON:0000058,6.24e-07,19;UBERON:0000080,7.21e-07,9;UBERON:0002120,7.21e-07,9;UBERON:0004875,7.21e-07,9;UBERON:0005721,7.21e-07,9;UBERON:0005754,7.21e-07,9;UBERON:0007297,7.21e-07,9;UBERON:0003133,7.42e-07,48 | |||
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|short_description=p4@SPINK13 | |||
}} | }} |
Latest revision as of 23:56, 15 September 2015
Short description: | p4@SPINK13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SPINK13_5end |
Coexpression cluster: | C106_Hep2_epitheloid_placenta_cervical_rectal_anaplastic_glassy |
Association with transcript: | 8bp_to_uc003lpc.2, uc010jgt.2_5end |
EntrezGene: | SPINK13 |
HGNC: | 27200 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
larynx | 5.33e-118 | 9 |
upper respiratory tract | 1.40e-55 | 19 |
male genital duct | 1.14e-40 | 3 |
internal male genitalia | 1.14e-40 | 3 |
duct of male reproductive system | 1.05e-30 | 4 |
respiratory primordium | 2.04e-27 | 38 |
endoderm of foregut | 2.04e-27 | 38 |
segment of respiratory tract | 5.23e-22 | 47 |
respiratory tract | 4.83e-19 | 54 |
epididymis | 4.73e-15 | 1 |
vas deferens | 7.13e-15 | 1 |
spermatic cord | 7.13e-15 | 1 |
seminal vesicle | 2.11e-14 | 1 |
seminal fluid secreting gland | 2.11e-14 | 1 |
respiratory system | 1.20e-13 | 74 |
internal genitalia | 3.22e-13 | 25 |
male reproductive organ | 1.37e-11 | 11 |
foregut | 1.82e-11 | 87 |
subdivision of digestive tract | 4.11e-08 | 118 |
primordium | 3.61e-07 | 160 |
duct | 6.24e-07 | 19 |
mesonephros | 7.21e-07 | 9 |
pronephros | 7.21e-07 | 9 |
nephrogenic cord | 7.21e-07 | 9 |
pronephric mesoderm | 7.21e-07 | 9 |
rostral part of nephrogenic cord | 7.21e-07 | 9 |
presumptive pronephric mesoderm | 7.21e-07 | 9 |
reproductive organ | 7.42e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.05e-11 | 106 |
cell type cancer | 3.73e-08 | 143 |