FFCP PHASE1:Hg19::chr5:134369177..134369188,+: Difference between revisions
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|id=chr5:134369177..134369188,+
|short_description=p2@ENST00000505828
|description=CAGE_peak_2_at_ENST00000505828_5end
|association_with_transcript=45bp_to_ENST0000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=45bp_to_ENST00000505828_5end | |||
|cluster_id=chr5:134369177..134369188,+ | |||
|description=CAGE_peak_2_at_ENST00000505828_5end | |||
|id=chr5:134369177..134369188,+ | |||
|ontology_enrichment_celltype=CL:0002504!1.95e-07!3;CL:1000279!1.95e-07!3;CL:1000280!1.95e-07!3;CL:0000223!3.27e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:1000487;9.87e-18;2!CL:0002622;2.19e-12;3!CL:0002504;2.74e-12;3!CL:1000279;2.74e-12;3!CL:1000280;2.74e-12;3 | |||
|ontology_enrichment_celltype_v019_2=CL:1000487,9.07e-18,2;CL:0002622,2.31e-12,3;CL:0002504,2.89e-12,3;CL:1000279,2.89e-12,3;CL:1000280,2.89e-12,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!4.03e-09!106;DOID:0050687!3.44e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:3307;8.77e-67;2!DOID:3095;4.86e-07;22!DOID:2994;4.86e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,7.41e-67,2;DOID:3095,4.79e-07,22;DOID:2994,4.79e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0001007!6.55e-21!155;UBERON:0001555!6.55e-21!155;UBERON:0007026!6.55e-21!155;UBERON:0004921!1.12e-20!129;UBERON:0004185!1.12e-20!129;UBERON:0004119!8.95e-20!169;UBERON:0000925!8.95e-20!169;UBERON:0006595!8.95e-20!169;UBERON:0000077!6.63e-15!130;UBERON:0003104!6.61e-12!238;UBERON:0009142!6.61e-12!238;UBERON:0000161!1.01e-11!35;UBERON:0003929!3.59e-10!54;UBERON:0000162!3.72e-10!14;UBERON:0001353!3.72e-10!14;UBERON:0000163!3.72e-10!14;UBERON:0006866!3.72e-10!14;UBERON:0000164!3.72e-10!14;UBERON:0000931!3.72e-10!14;UBERON:0001041!9.45e-10!98;UBERON:0004122!2.41e-09!15;UBERON:0000481!3.21e-09!347;UBERON:0005911!1.03e-08!82;UBERON:0001046!1.43e-08!19;UBERON:0001004!1.92e-08!72;UBERON:0002367!3.40e-08!11;UBERON:0010147!3.40e-08!11;UBERON:0009846!3.40e-08!11;UBERON:0003353!3.40e-08!11;UBERON:0004902!3.40e-08!11;UBERON:0003820!3.40e-08!11;UBERON:0009847!3.40e-08!11;UBERON:0000065!1.33e-07!53;UBERON:0000072!2.06e-07!46;UBERON:0003937!2.09e-07!12;UBERON:0005399!2.09e-07!12;UBERON:0001737!3.02e-07!9;UBERON:0000490!5.55e-07!138 | |||
|ontology_enrichment_uberon_v019=UBERON:0002367;5.10e-13;11!UBERON:0010147;5.10e-13;11!UBERON:0003937;5.08e-12;12!UBERON:0005399;5.08e-12;12!UBERON:0003101;5.40e-07;22!UBERON:0000079;5.40e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002367,5.10e-13,11;UBERON:0010147,5.10e-13,11;UBERON:0009846,5.10e-13,11;UBERON:0003353,5.10e-13,11;UBERON:0004902,5.10e-13,11;UBERON:0003820,5.10e-13,11;UBERON:0009847,5.10e-13,11;UBERON:0003937,5.08e-12,12;UBERON:0005399,5.08e-12,12;UBERON:0000162,1.90e-10,14;UBERON:0001353,1.90e-10,14;UBERON:0000163,1.90e-10,14;UBERON:0006866,1.90e-10,14;UBERON:0000164,1.90e-10,14;UBERON:0000931,1.90e-10,14;UBERON:0004122,8.10e-10,15;UBERON:0001046,5.94e-08,19;UBERON:0003101,5.40e-07,22;UBERON:0000079,5.40e-07,22 | |||
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| ||
|short_description=p2@ENST00000505828 | |||
}} | }} |
Latest revision as of 09:55, 30 July 2015
Short description: | p2@ENST00000505828 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000505828_5end |
Coexpression cluster: | NA |
Association with transcript: | 45bp_to_ENST00000505828_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of prostate | 9.07e-18 | 2 |
prostate stromal cell | 2.31e-12 | 3 |
enteric smooth muscle cell | 2.89e-12 | 3 |
smooth muscle cell of large intestine | 2.89e-12 | 3 |
smooth muscle cell of colon | 2.89e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
prostate gland | 5.10e-13 | 11 |
male accessory sex gland | 5.10e-13 | 11 |
embryonic cloacal epithelium | 5.10e-13 | 11 |
epithelium of hindgut | 5.10e-13 | 11 |
urogenital sinus epithelium | 5.10e-13 | 11 |
prostate bud | 5.10e-13 | 11 |
prostate field | 5.10e-13 | 11 |
sex gland | 5.08e-12 | 12 |
male reproductive gland | 5.08e-12 | 12 |
cloaca | 1.90e-10 | 14 |
anal region | 1.90e-10 | 14 |
embryonic cloaca | 1.90e-10 | 14 |
terminal part of digestive tract | 1.90e-10 | 14 |
primitive urogenital sinus | 1.90e-10 | 14 |
proctodeum | 1.90e-10 | 14 |
genitourinary system | 8.10e-10 | 15 |
hindgut | 5.94e-08 | 19 |
male organism | 5.40e-07 | 22 |
male reproductive system | 5.40e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
teratoma | 7.41e-67 | 2 |
germ cell and embryonal cancer | 4.79e-07 | 22 |
germ cell cancer | 4.79e-07 | 22 |