FFCP PHASE1:Hg19::chr5:128301279..128301283,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:128301279..128301283,+
|short_description=p5@SLC27A6
|description=CAGE_peak_5_at_SLC27A6_5end
|association_with_transcript=58bp_to_ENST00000506176_5end
|E...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=28965 | |EntrezGene=28965 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11000 | |HGNC=11000 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=58bp_to_ENST00000506176_5end | |||
|cluster_id=chr5:128301279..128301283,+ | |||
|description=CAGE_peak_5_at_SLC27A6_5end | |||
|id=chr5:128301279..128301283,+ | |||
|ontology_enrichment_celltype=CL:0002541!7.07e-11!3;CL:0000349!7.30e-11!3;CL:0002577!7.30e-11!3;CL:0002536!9.58e-08!2 | |||
|ontology_enrichment_celltype_v019=CL:0000349;1.11e-53;19!CL:0002541;5.94e-32;3!CL:0002577;9.08e-32;3!CL:0002536;6.68e-22;2!CL:0002537;1.31e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,9.46e-54,19;CL:0002541,5.08e-32,3;CL:0002577,5.65e-32,3;CL:0002536,9.19e-22,2;CL:0002537,1.31e-09,5 | |||
|ontology_enrichment_development_v019=UBERON:0004140;5.32e-12;1!UBERON:0003124;1.13e-11;1!UBERON:0010226;1.13e-11;1!UBERON:0004872;6.58e-07;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1799;3.45e-12;1!DOID:10165;3.45e-12;1!DOID:1798;3.45e-12;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,4.06e-12,1;DOID:10165,4.06e-12,1;DOID:1798,4.06e-12,1 | |||
|ontology_enrichment_uberon=UBERON:0005631!2.26e-32!14;UBERON:0000158!2.26e-32!14;UBERON:0003124!5.40e-23!7;UBERON:0000478!1.28e-17!24;UBERON:0001987!7.49e-14!4;UBERON:0004340!7.49e-14!4;UBERON:0000305!5.30e-12!7;UBERON:0000476!7.07e-11!3;UBERON:0000920!7.07e-11!3;UBERON:0004871!1.91e-10!8;UBERON:0003975!4.82e-10!22;UBERON:0007023!1.21e-08!115;UBERON:0004175!1.25e-08!25;UBERON:0003100!2.26e-08!41;UBERON:0000995!2.30e-08!21;UBERON:0004923!4.35e-08!57;UBERON:0005795!6.38e-08!22;UBERON:0005156!4.05e-07!59;UBERON:0000990!4.05e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;4.49e-51;24!UBERON:0005631;7.43e-51;10!UBERON:0000158;7.43e-51;10!UBERON:0001987;1.24e-41;4!UBERON:0003124;5.94e-32;3!UBERON:0000920;5.94e-32;3!UBERON:0000305;1.52e-24;7!UBERON:0002084;1.13e-11;1!UBERON:0002082;1.13e-11;1!UBERON:0004923;3.01e-07;55 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.43e-88,14;UBERON:0000158,1.43e-88,14;UBERON:0003124,4.71e-72,7;UBERON:0000478,3.99e-51,24;UBERON:0001987,8.14e-42,4;UBERON:0004340,8.14e-42,4;UBERON:0000920,5.08e-32,3;UBERON:0000305,1.83e-24,7;UBERON:0004871,1.89e-21,8;UBERON:0004923,3.35e-21,66;UBERON:0002084,9.61e-12,1;UBERON:0002082,9.61e-12,1;UBERON:0010226,9.61e-12,1;UBERON:0000995,3.45e-08,21;UBERON:0005795,8.00e-08,22;UBERON:0003975,8.00e-08,22;UBERON:0004175,6.66e-07,25 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,2.18441372130172,1.05506791291381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.201057944823262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.839910640994298,0.141775097242386,0.358234090811393,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,1.21251028578504,1.66435439510497,2.72151263996712,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40101294060657,0,0.34444334449382,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0.382838137483752,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0.43050537267123,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.34242278632766,0.890894042497916,3.37876772309155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0.139423744278603,0.0769502585037971,0,0,1.70539524378567,0.217294743844016,1.91400695839152,1.00757352742049,3.73124343213044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.858452096273142,0,2.35142153703542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32418394073086,0,0,0,0,0,0,0,2.71949019648302,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,5.2061731150044,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,3.14288033377707,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,1.00885116665647,0,0,1.1531308121143,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316027223465453,0,0,0,0,0,0,0,0,0,0,0.68732060563215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0.757786982182394,0,0,0.103432995861895,0.213233981900981,0,0.0645889098360061,0.186224142887574,0,0.0636471582781649,0,0.217716747896961,0,0.0673520530145875,0.0717222053926763,0,0,0,0,0,0,0.244482888365733,0,0.665756774185513,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,2.18441372130172,1.05506791291381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.201057944823262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.839910640994298,0.141775097242386,0.358234090811393,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,1.21251028578504,1.66435439510497,2.72151263996712,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40101294060657,0,0.34444334449382,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0.382838137483752,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0.43050537267123,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.34242278632766,0.890894042497916,3.37876772309155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0.139423744278603,0.0769502585037971,0,0,1.70539524378567,0.217294743844016,1.91400695839152,1.00757352742049,3.73124343213044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.858452096273142,0,2.35142153703542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32418394073086,0,0,0,0,0,0,0,2.71949019648302,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,5.2061731150044,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,3.14288033377707,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,1.00885116665647,0,0,1.1531308121143,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316027223465453,0,0,0,0,0,0,0,0,0,0,0.68732060563215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0.757786982182394,0,0,0.103432995861895,0.213233981900981,0,0.0645889098360061,0.186224142887574,0,0.0636471582781649,0,0.217716747896961,0,0.0673520530145875,0.0717222053926763,0,0,0,0,0,0,0.244482888365733,0,0.665756774185513,0,0 | ||
|short_description=p5@SLC27A6 | |||
}} | }} |
Latest revision as of 03:10, 20 September 2015
Short description: | p5@SLC27A6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SLC27A6_5end |
Coexpression cluster: | NA |
Association with transcript: | 58bp_to_ENST00000506176_5end |
EntrezGene: | SLC27A6 |
HGNC: | 11000 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 9.46e-54 | 19 |
chorionic membrane mesenchymal stem cell | 5.08e-32 | 3 |
placental epithelial cell | 5.65e-32 | 3 |
amniotic epithelial cell | 9.19e-22 | 2 |
amnion mesenchymal stem cell | 1.31e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.43e-88 | 14 |
membranous layer | 1.43e-88 | 14 |
chorion | 4.71e-72 | 7 |
extraembryonic structure | 3.99e-51 | 24 |
placenta | 8.14e-42 | 4 |
allantois | 8.14e-42 | 4 |
egg chorion | 5.08e-32 | 3 |
amnion | 1.83e-24 | 7 |
somatic layer of lateral plate mesoderm | 1.89e-21 | 8 |
organ component layer | 3.35e-21 | 66 |
heart left ventricle | 9.61e-12 | 1 |
cardiac ventricle | 9.61e-12 | 1 |
future cardiac ventricle | 9.61e-12 | 1 |
uterus | 3.45e-08 | 21 |
embryonic uterus | 8.00e-08 | 22 |
internal female genitalia | 8.00e-08 | 22 |
internal genitalia | 6.66e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 4.06e-12 | 1 |
endocrine pancreas cancer | 4.06e-12 | 1 |
pancreatic endocrine carcinoma | 4.06e-12 | 1 |