FFCP PHASE1:Hg19::chr5:113697740..113697793,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:113697740..113697793,+
|short_description=p1@KCNN2
|description=CAGE_peak_1_at_KCNN2_5end
|association_with_transcript=-222bp_to_ENST00000264773,NM_021614,...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3781 | |EntrezGene=3781 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6291 | |HGNC=6291 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H2S1,Q6PJI0 | |UniProt=Q9H2S1,Q6PJI0 | ||
|association_with_transcript=-222bp_to_ENST00000264773,NM_021614,uc003kqo.2_5end | |||
|cluster_id=chr5:113697740..113697793,+ | |||
|coexpression_cluster_id=C2799 | |||
|description=CAGE_peak_1_at_KCNN2_5end | |||
|id=chr5:113697740..113697793,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000540;1.98e-07;6!CL:0000404;1.98e-07;6!CL:0002322;5.21e-07;5!CL:0002138;8.62e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.08e-07,6;CL:0000031,2.08e-07,6;CL:0000404,2.08e-07,6;CL:0000047,3.75e-07,8;CL:0002322,5.02e-07,5;CL:0005020,9.41e-07,6;CL:0002138,9.41e-07,6;CL:0005022,9.41e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.64e-12;82!CL:0000031;1.98e-07;6!CL:0005022;8.62e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p1@KCNN2 | |||
}} | }} |
Latest revision as of 19:04, 19 September 2015
Short description: | p1@KCNN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KCNN2_5end |
Coexpression cluster: | C2799_hippocampus_cerebellum_pituitary_amygdala_olfactory_middle_medial |
Association with transcript: | -222bp_to_ENST00000264773, NM_021614, uc003kqo.2_5end |
EntrezGene: | KCNN2 |
HGNC: | 6291 |
UniProt: | Q9H2S1Q6PJI0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.08e-07 | 6 |
neuroblast | 2.08e-07 | 6 |
electrically signaling cell | 2.08e-07 | 6 |
neuronal stem cell | 3.75e-07 | 8 |
embryonic stem cell | 5.02e-07 | 5 |
lymphangioblast | 9.41e-07 | 6 |
endothelial cell of lymphatic vessel | 9.41e-07 | 6 |
vascular lymphangioblast | 9.41e-07 | 6 |