FFCP PHASE1:Hg19::chr4:74281965..74282048,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr4:74281965..74282048,+
|short_description=p5@ALB
|description=CAGE_peak_5_at_ALB_5end
|association_with_transcript=0bp_to_BC014308_5end
|EntrezGene=213
|HG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=213 | |EntrezGene=213 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=399 | |HGNC=399 | ||
|TSSclassifier=strong | |||
|UniProt=P02768 | |UniProt=P02768 | ||
|association_with_transcript=0bp_to_BC014308_5end | |||
|cluster_id=chr4:74281965..74282048,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_5_at_ALB_5end | |||
|id=chr4:74281965..74282048,+ | |||
|ontology_enrichment_celltype=CL:0000181!3.85e-25!12;CL:0000417!3.85e-25!12;CL:0000668!3.85e-25!12;CL:0000414!3.85e-25!12;CL:0000412!3.85e-25!12;CL:0000182!3.85e-25!12;CL:0000223!3.72e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000182;3.45e-35;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.45e-35,12;CL:0000223,2.15e-09,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;7.74e-27;11!UBERON:0009497;1.02e-22;13!UBERON:0001041;7.99e-10;30!UBERON:0003104;1.69e-09;31!CL:0000223;2.84e-07;58!UBERON:0007297;5.44e-07;2 | |||
|ontology_enrichment_disease=DOID:8552!1.42e-07!1;DOID:0050619!2.21e-07!1;DOID:1357!2.21e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:8552;6.43e-13;1 | |||
|ontology_enrichment_disease_v019_2=DOID:8552,6.82e-13,1 | |||
|ontology_enrichment_uberon=UBERON:0002107!9.87e-26!19;UBERON:0006925!9.87e-26!19;UBERON:0008836!9.87e-26!19;UBERON:0005057!1.37e-22!26;UBERON:0008835!5.11e-22!22;UBERON:0003894!5.11e-22!22;UBERON:0009854!5.38e-21!23;UBERON:0007499!3.40e-19!25;UBERON:0009497!3.40e-19!25;UBERON:0000015!3.40e-19!25;UBERON:0002423!3.40e-19!25;UBERON:0006235!3.40e-19!25;UBERON:0004161!3.40e-19!25;UBERON:0009856!2.13e-18!26;UBERON:0002368!3.05e-16!35;UBERON:0002365!3.48e-15!31;UBERON:0002330!3.48e-15!31;UBERON:0000949!7.55e-15!45;UBERON:0003929!2.31e-14!54;UBERON:0005172!8.22e-12!55;UBERON:0005173!8.22e-12!55;UBERON:0002530!8.66e-11!59;UBERON:0002417!1.90e-10!61;UBERON:0000916!1.90e-10!61;UBERON:0005911!1.14e-08!82;UBERON:0001301!1.83e-07!1;UBERON:0001764!2.21e-07!1;UBERON:0001825!2.21e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;3.85e-39;19!UBERON:0006925;3.85e-39;19!UBERON:0002423;1.40e-29;25!UBERON:0002365;7.85e-23;31!UBERON:0002330;7.85e-23;31!UBERON:0002368;3.86e-20;33!UBERON:0000949;1.27e-17;43!UBERON:0001301;1.03e-12;1!UBERON:0001007;2.05e-09;81!UBERON:0005172;6.95e-09;52!UBERON:0005173;6.95e-09;52!UBERON:0002417;7.82e-08;58!UBERON:0000916;7.82e-08;58!UBERON:0002530;9.84e-08;57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.85e-39,19;UBERON:0006925,3.85e-39,19;UBERON:0008836,3.85e-39,19;UBERON:0008835,1.04e-33,22;UBERON:0003894,1.04e-33,22;UBERON:0009854,3.24e-32,23;UBERON:0007499,1.40e-29,25;UBERON:0009497,1.40e-29,25;UBERON:0000015,1.40e-29,25;UBERON:0002423,1.40e-29,25;UBERON:0006235,1.40e-29,25;UBERON:0004161,1.40e-29,25;UBERON:0009856,2.04e-28,26;UBERON:0002365,1.03e-23,31;UBERON:0002330,1.03e-23,31;UBERON:0002368,6.46e-21,35;UBERON:0000949,2.95e-20,45;UBERON:0003929,9.61e-17,54;UBERON:0005172,1.08e-16,54;UBERON:0005173,1.08e-16,54;UBERON:0002417,6.40e-15,60;UBERON:0000916,6.40e-15,60;UBERON:0001301,1.09e-12,1;UBERON:0002530,4.51e-12,59;UBERON:0005911,1.16e-10,82;UBERON:0005177,2.06e-10,101;UBERON:0004921,1.17e-08,118;UBERON:0001041,6.69e-08,87;UBERON:0009569,1.75e-07,112;UBERON:0003914,4.10e-07,117;UBERON:0001007,8.26e-07,145;UBERON:0001555,8.26e-07,145;UBERON:0007026,8.26e-07,145;UBERON:0005256,8.93e-07,122 | |||
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|short_description=p5@ALB | |||
}} | }} |
Latest revision as of 13:07, 18 September 2015
Short description: | p5@ALB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ALB_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_BC014308_5end |
EntrezGene: | ALB |
HGNC: | 399 |
UniProt: | P02768 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.45e-35 | 12 |
endodermal cell | 2.15e-09 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 3.85e-39 | 19 |
digestive gland | 3.85e-39 | 19 |
liver bud | 3.85e-39 | 19 |
hepatic diverticulum | 1.04e-33 | 22 |
liver primordium | 1.04e-33 | 22 |
digestive tract diverticulum | 3.24e-32 | 23 |
epithelial sac | 1.40e-29 | 25 |
epithelium of foregut-midgut junction | 1.40e-29 | 25 |
anatomical boundary | 1.40e-29 | 25 |
hepatobiliary system | 1.40e-29 | 25 |
foregut-midgut junction | 1.40e-29 | 25 |
septum transversum | 1.40e-29 | 25 |
sac | 2.04e-28 | 26 |
exocrine gland | 1.03e-23 | 31 |
exocrine system | 1.03e-23 | 31 |
endocrine gland | 6.46e-21 | 35 |
endocrine system | 2.95e-20 | 45 |
gut epithelium | 9.61e-17 | 54 |
abdomen element | 1.08e-16 | 54 |
abdominal segment element | 1.08e-16 | 54 |
abdominal segment of trunk | 6.40e-15 | 60 |
abdomen | 6.40e-15 | 60 |
epididymis | 1.09e-12 | 1 |
gland | 4.51e-12 | 59 |
endo-epithelium | 1.16e-10 | 82 |
trunk region element | 2.06e-10 | 101 |
subdivision of digestive tract | 1.17e-08 | 118 |
foregut | 6.69e-08 | 87 |
subdivision of trunk | 1.75e-07 | 112 |
epithelial tube | 4.10e-07 | 117 |
digestive system | 8.26e-07 | 145 |
digestive tract | 8.26e-07 | 145 |
primitive gut | 8.26e-07 | 145 |
trunk mesenchyme | 8.93e-07 | 122 |
Ontology term | p-value | n |
---|---|---|
chronic myeloid leukemia | 6.82e-13 | 1 |