FFCP PHASE1:Hg19::chr4:74274309..74274314,+: Difference between revisions
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|id=chr4:74274309..74274314,+
|short_description=p41@ALB
|description=CAGE_peak_41_at_ALB_5end
|association_with_transcript=0bp_to_uc010iij.2_5end
|EntrezGene=213
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=213 | |EntrezGene=213 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=399 | |HGNC=399 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc010iij.2_5end | |||
|cluster_id=chr4:74274309..74274314,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_41_at_ALB_5end | |||
|id=chr4:74274309..74274314,+ | |||
|ontology_enrichment_celltype=CL:0000181!2.59e-42!12;CL:0000417!2.59e-42!12;CL:0000668!2.59e-42!12;CL:0000414!2.59e-42!12;CL:0000412!2.59e-42!12;CL:0000182!2.59e-42!12;CL:0000223!2.62e-11!59 | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.41e-19;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.41e-19,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;4.42e-10;11!UBERON:0009497;1.13e-08;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!2.72e-47!19;UBERON:0006925!2.72e-47!19;UBERON:0008836!2.72e-47!19;UBERON:0008835!8.83e-41!22;UBERON:0003894!8.83e-41!22;UBERON:0009854!5.49e-39!23;UBERON:0007499!7.91e-36!25;UBERON:0009497!7.91e-36!25;UBERON:0000015!7.91e-36!25;UBERON:0002423!7.91e-36!25;UBERON:0006235!7.91e-36!25;UBERON:0004161!7.91e-36!25;UBERON:0005057!1.97e-34!26;UBERON:0009856!1.97e-34!26;UBERON:0002365!8.58e-29!31;UBERON:0002330!8.58e-29!31;UBERON:0002368!1.94e-25!35;UBERON:0000949!8.90e-25!45;UBERON:0003929!1.65e-20!54;UBERON:0005172!4.12e-20!55;UBERON:0005173!4.12e-20!55;UBERON:0002417!4.70e-18!61;UBERON:0000916!4.70e-18!61;UBERON:0002530!7.77e-15!59;UBERON:0005911!3.21e-13!82;UBERON:0005177!2.86e-12!107;UBERON:0001041!6.40e-11!98;UBERON:0004921!6.50e-10!129;UBERON:0004185!6.50e-10!129;UBERON:0009569!2.45e-09!113;UBERON:0000466!2.77e-08!126;UBERON:0001007!4.49e-08!155;UBERON:0001555!4.49e-08!155;UBERON:0007026!4.49e-08!155;UBERON:0000077!5.34e-08!130;UBERON:0000490!1.79e-07!138;UBERON:0004119!2.58e-07!169;UBERON:0000925!2.58e-07!169;UBERON:0006595!2.58e-07!169;UBERON:0002405!3.52e-07!115;UBERON:0003914!4.81e-07!118 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;6.62e-33;19!UBERON:0006925;6.62e-33;19!UBERON:0002423;4.07e-25;25!UBERON:0002365;2.85e-20;31!UBERON:0002330;2.85e-20;31!UBERON:0002368;1.53e-17;33!UBERON:0000949;9.88e-13;43!UBERON:0005172;3.29e-09;52!UBERON:0005173;3.29e-09;52!UBERON:0002417;3.69e-07;58!UBERON:0000916;3.69e-07;58!UBERON:0002530;9.37e-07;57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,6.62e-33,19;UBERON:0006925,6.62e-33,19;UBERON:0008836,6.62e-33,19;UBERON:0008835,1.76e-28,22;UBERON:0003894,1.76e-28,22;UBERON:0009854,2.91e-27,23;UBERON:0007499,4.07e-25,25;UBERON:0009497,4.07e-25,25;UBERON:0000015,4.07e-25,25;UBERON:0002423,4.07e-25,25;UBERON:0006235,4.07e-25,25;UBERON:0004161,4.07e-25,25;UBERON:0009856,3.63e-24,26;UBERON:0002365,2.48e-20,31;UBERON:0002330,2.48e-20,31;UBERON:0002368,4.75e-18,35;UBERON:0000949,4.14e-14,45;UBERON:0003929,8.40e-12,54;UBERON:0005172,8.40e-12,54;UBERON:0005173,8.40e-12,54;UBERON:0002530,8.02e-11,59;UBERON:0002417,1.20e-10,60;UBERON:0000916,1.20e-10,60;UBERON:0005911,7.71e-08,82;UBERON:0001041,2.13e-07,87 | |||
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|short_description=p41@ALB | |||
}} | }} |
Latest revision as of 12:37, 18 September 2015
Short description: | p41@ALB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_41_at_ALB_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_uc010iij.2_5end |
EntrezGene: | ALB |
HGNC: | 399 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.41e-19 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 6.62e-33 | 19 |
digestive gland | 6.62e-33 | 19 |
liver bud | 6.62e-33 | 19 |
hepatic diverticulum | 1.76e-28 | 22 |
liver primordium | 1.76e-28 | 22 |
digestive tract diverticulum | 2.91e-27 | 23 |
epithelial sac | 4.07e-25 | 25 |
epithelium of foregut-midgut junction | 4.07e-25 | 25 |
anatomical boundary | 4.07e-25 | 25 |
hepatobiliary system | 4.07e-25 | 25 |
foregut-midgut junction | 4.07e-25 | 25 |
septum transversum | 4.07e-25 | 25 |
sac | 3.63e-24 | 26 |
exocrine gland | 2.48e-20 | 31 |
exocrine system | 2.48e-20 | 31 |
endocrine gland | 4.75e-18 | 35 |
endocrine system | 4.14e-14 | 45 |
gut epithelium | 8.40e-12 | 54 |
abdomen element | 8.40e-12 | 54 |
abdominal segment element | 8.40e-12 | 54 |
gland | 8.02e-11 | 59 |
abdominal segment of trunk | 1.20e-10 | 60 |
abdomen | 1.20e-10 | 60 |
endo-epithelium | 7.71e-08 | 82 |
foregut | 2.13e-07 | 87 |