FFCP PHASE1:Hg19::chr4:71457970..71457974,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr4:71457970..71457974,+
|short_description=p1@AMBN
|description=CAGE_peak_1_at_AMBN_5end
|association_with_transcript=0bp_to_ENST00000322937,NM_016519_5end
|...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=258 | |EntrezGene=258 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=452 | |HGNC=452 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NP70,Q546D7 | |UniProt=Q9NP70,Q546D7 | ||
|association_with_transcript=0bp_to_ENST00000322937,NM_016519_5end | |||
|cluster_id=chr4:71457970..71457974,+ | |||
|coexpression_cluster_id=C100 | |||
|description=CAGE_peak_1_at_AMBN_5end | |||
|id=chr4:71457970..71457974,+ | |||
|ontology_enrichment_celltype=CL:0002322!1.61e-15!5;CL:0000047!4.25e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0002563;3.21e-13;4!CL:0000047;1.93e-07;2!CL:0002253;1.93e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.84e-13,4;CL:0002253,2.12e-07,2;CL:0000047,5.14e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0006222;1.33e-13;1 | |||
|ontology_enrichment_disease=DOID:171!7.11e-12!10 | |||
|ontology_enrichment_disease_v019=DOID:171;6.26e-12;10!DOID:3193;1.36e-07;2!DOID:962;1.36e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:171,6.26e-12,10;DOID:3193,1.28e-07,2;DOID:962,1.28e-07,2 | |||
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|ontology_enrichment_uberon_v019=UBERON:0001905;1.67e-26;2!UBERON:0002757;1.67e-26;2!UBERON:0010134;1.67e-26;2!UBERON:0005408;1.67e-26;2!UBERON:0001899;1.67e-26;2!UBERON:0001894;8.16e-17;7!UBERON:0003296;9.15e-14;4!UBERON:0010133;9.15e-14;4!UBERON:0002784;9.15e-14;4!UBERON:0002346;1.42e-13;4!UBERON:0000923;1.42e-13;4!UBERON:0010316;1.42e-13;4!UBERON:0005291;1.42e-13;4!UBERON:0001242;3.21e-13;4!UBERON:0001262;3.21e-13;4!UBERON:0004786;3.21e-13;4!UBERON:0004808;3.21e-13;4!UBERON:0001277;3.21e-13;4!UBERON:0002050;4.79e-11;5!UBERON:0005423;4.79e-11;5!UBERON:0000485;6.08e-08;7!UBERON:0003929;6.08e-08;7!UBERON:0003714;1.36e-07;2!UBERON:0003350;4.69e-07;8!UBERON:0000922;5.94e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.67e-26,2;UBERON:0002757,1.67e-26,2;UBERON:0010134,1.67e-26,2;UBERON:0005408,1.67e-26,2;UBERON:0001899,1.67e-26,2;UBERON:0001894,7.13e-17,7;UBERON:0006222,7.13e-17,7;UBERON:0003296,9.15e-14,4;UBERON:0010133,9.15e-14,4;UBERON:0002784,9.15e-14,4;UBERON:0001242,2.84e-13,4;UBERON:0001262,2.84e-13,4;UBERON:0004786,2.84e-13,4;UBERON:0004808,2.84e-13,4;UBERON:0001277,2.84e-13,4;UBERON:0003714,1.28e-07,2;UBERON:0003350,4.41e-07,8;UBERON:0000160,9.97e-07,17 | |||
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| ||
|short_description=p1@AMBN | |||
}} | }} |
Latest revision as of 10:53, 18 September 2015
Short description: | p1@AMBN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AMBN_5end |
Coexpression cluster: | C100_rhabdomyosarcoma_gastric_pineal_Wilms_cervical_mesodermal_endometrial |
Association with transcript: | 0bp_to_ENST00000322937, NM_016519_5end |
EntrezGene: | AMBN |
HGNC: | 452 |
UniProt: | Q9NP70Q546D7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.84e-13 | 4 |
epithelial cell of large intestine | 2.12e-07 | 2 |
neuronal stem cell | 5.14e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
pineal body | 1.67e-26 | 2 |
regional part of epithalamus | 1.67e-26 | 2 |
secretory circumventricular organ | 1.67e-26 | 2 |
circumventricular organ | 1.67e-26 | 2 |
epithalamus | 1.67e-26 | 2 |
diencephalon | 7.13e-17 | 7 |
future diencephalon | 7.13e-17 | 7 |
gland of diencephalon | 9.15e-14 | 4 |
neuroendocrine gland | 9.15e-14 | 4 |
regional part of diencephalon | 9.15e-14 | 4 |
intestinal mucosa | 2.84e-13 | 4 |
wall of intestine | 2.84e-13 | 4 |
gastrointestinal system mucosa | 2.84e-13 | 4 |
gastrointestinal system epithelium | 2.84e-13 | 4 |
intestinal epithelium | 2.84e-13 | 4 |
neural tissue | 1.28e-07 | 2 |
epithelium of mucosa | 4.41e-07 | 8 |
intestine | 9.97e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 6.26e-12 | 10 |
peripheral nerve sheath neoplasm | 1.28e-07 | 2 |
neurofibroma | 1.28e-07 | 2 |