FFCP PHASE1:Hg19::chr4:66536310..66536351,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr4:66536310..66536351,-
|short_description=p6@EPHA5
|description=CAGE_peak_6_at_EPHA5_5end
|association_with_transcript=-97bp_to_ENST00000511294_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2044 | |EntrezGene=2044 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3389 | |HGNC=3389 | ||
|TSSclassifier=strong | |||
|UniProt=F8VP57 | |UniProt=F8VP57 | ||
|association_with_transcript=-97bp_to_ENST00000511294_5end | |||
|cluster_id=chr4:66536310..66536351,- | |||
|coexpression_cluster_id=C38 | |||
|description=CAGE_peak_6_at_EPHA5_5end | |||
|id=chr4:66536310..66536351,- | |||
|ontology_enrichment_celltype=CL:1000306!1.94e-07!4;CL:0002547!1.94e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:1000306;1.59e-11;4!CL:0002547;1.59e-11;4!CL:0002569;7.32e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:1000306,2.02e-11,4;CL:0002547,2.02e-11,4;CL:0002569,9.01e-08,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1115!9.47e-07!20 | |||
|ontology_enrichment_disease_v019=DOID:3371;2.62e-12;1!DOID:4549;2.62e-12;1!DOID:5861;2.62e-12;1!DOID:6496;2.62e-12;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,2.63e-12,1;DOID:4549,2.63e-12,1;DOID:5861,2.63e-12,1;DOID:6496,2.63e-12,1 | |||
|ontology_enrichment_uberon=UBERON:0001017!7.52e-40!82;UBERON:0005743!6.48e-39!86;UBERON:0001049!5.65e-38!57;UBERON:0005068!5.65e-38!57;UBERON:0006241!5.65e-38!57;UBERON:0007135!5.65e-38!57;UBERON:0003075!1.33e-36!86;UBERON:0007284!1.33e-36!86;UBERON:0002346!6.26e-36!90;UBERON:0000073!4.43e-35!94;UBERON:0001016!4.43e-35!94;UBERON:0002616!3.33e-32!59;UBERON:0000955!5.09e-32!69;UBERON:0006238!5.09e-32!69;UBERON:0002780!3.10e-29!41;UBERON:0001890!3.10e-29!41;UBERON:0006240!3.10e-29!41;UBERON:0003080!2.56e-28!42;UBERON:0002020!6.96e-27!34;UBERON:0003528!6.96e-27!34;UBERON:0001893!1.13e-26!34;UBERON:0002791!1.47e-25!33;UBERON:0003056!7.83e-25!61;UBERON:0001869!1.83e-24!32;UBERON:0000956!7.71e-23!25;UBERON:0000203!7.71e-23!25;UBERON:0000924!7.11e-22!173;UBERON:0006601!7.11e-22!173;UBERON:0002619!7.26e-22!22;UBERON:0004121!8.09e-22!169;UBERON:0000033!1.04e-21!123;UBERON:0000153!5.39e-20!129;UBERON:0007811!5.39e-20!129;UBERON:0001950!6.31e-19!20;UBERON:0007023!2.36e-16!115;UBERON:0000025!1.32e-13!194;UBERON:0000483!9.59e-12!309;UBERON:0000119!1.93e-11!312;UBERON:0003076!1.33e-10!15;UBERON:0003057!1.33e-10!15;UBERON:0004111!1.64e-09!241;UBERON:0001871!2.47e-09!7;UBERON:0000477!2.92e-09!286;UBERON:0002298!3.54e-09!8;UBERON:0004733!4.23e-09!12;UBERON:0002028!4.23e-09!12;UBERON:0007277!4.23e-09!12;UBERON:0000349!1.30e-08!5;UBERON:0001872!2.76e-08!5;UBERON:0004732!2.99e-08!13;UBERON:0000064!4.70e-08!219;UBERON:0000415!1.94e-07!4;UBERON:0007240!1.94e-07!4;UBERON:0005742!1.94e-07!4;UBERON:0005734!1.94e-07!4;UBERON:0004664!1.94e-07!4;UBERON:0004663!1.94e-07!4;UBERON:0000923!8.20e-07!604;UBERON:0005291!8.20e-07!604;UBERON:0006598!8.20e-07!604;UBERON:0002532!8.20e-07!604;UBERON:0000922!8.75e-07!612;UBERON:0002050!9.31e-07!605;UBERON:0005423!9.31e-07!605 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;4.60e-22;2!UBERON:0002757;4.60e-22;2!UBERON:0010134;4.60e-22;2!UBERON:0005408;4.60e-22;2!UBERON:0001899;4.60e-22;2!UBERON:0007195;3.09e-12;1!UBERON:0003296;1.59e-11;4!UBERON:0010133;1.59e-11;4!UBERON:0002784;1.59e-11;4!UBERON:0004797;1.59e-11;4!UBERON:0000415;1.59e-11;4!UBERON:0007240;1.59e-11;4!UBERON:0005742;1.59e-11;4!UBERON:0005734;1.59e-11;4!UBERON:0004664;1.59e-11;4!UBERON:0004663;1.59e-11;4!UBERON:0001474;1.07e-09;18!UBERON:0003422;7.32e-08;6!UBERON:0002780;1.30e-07;41!UBERON:0001890;1.30e-07;41!UBERON:0002619;1.88e-07;22!UBERON:0001894;5.93e-07;7!UBERON:0003104;7.41e-07;7!UBERON:0009142;7.41e-07;7!UBERON:0004765;9.28e-07;26 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,2.85e-22,2;UBERON:0002757,2.85e-22,2;UBERON:0010134,2.85e-22,2;UBERON:0005408,2.85e-22,2;UBERON:0001899,2.85e-22,2;UBERON:0007195,2.93e-12,1;UBERON:0003296,1.26e-11,4;UBERON:0010133,1.26e-11,4;UBERON:0002784,1.26e-11,4;UBERON:0000415,2.02e-11,4;UBERON:0007240,2.02e-11,4;UBERON:0005742,2.02e-11,4;UBERON:0005734,2.02e-11,4;UBERON:0004664,2.02e-11,4;UBERON:0004663,2.02e-11,4;UBERON:0002780,1.15e-08,41;UBERON:0001890,1.15e-08,41;UBERON:0003080,1.15e-08,41;UBERON:0006240,1.15e-08,41;UBERON:0001049,2.26e-08,56;UBERON:0005068,2.26e-08,56;UBERON:0006241,2.26e-08,56;UBERON:0007135,2.26e-08,56;UBERON:0003422,9.01e-08,6;UBERON:0002619,1.53e-07,22;UBERON:0001017,3.65e-07,81;UBERON:0001894,5.19e-07,7;UBERON:0006222,5.19e-07,7;UBERON:0004797,6.78e-07,7 | |||
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| ||
|short_description=p6@EPHA5 | |||
}} | }} |
Latest revision as of 06:13, 18 September 2015
Short description: | p6@EPHA5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_EPHA5_5end |
Coexpression cluster: | C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms |
Association with transcript: | -97bp_to_ENST00000511294_5end |
EntrezGene: | EPHA5 |
HGNC: | 3389 |
UniProt: | F8VP57 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of tunica adventitia of artery | 2.02e-11 | 4 |
fibroblast of the aortic adventitia | 2.02e-11 | 4 |
mesenchymal stem cell of umbilical cord | 9.01e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
pineal body | 2.85e-22 | 2 |
regional part of epithalamus | 2.85e-22 | 2 |
secretory circumventricular organ | 2.85e-22 | 2 |
circumventricular organ | 2.85e-22 | 2 |
epithalamus | 2.85e-22 | 2 |
stroma of bone marrow | 2.93e-12 | 1 |
gland of diencephalon | 1.26e-11 | 4 |
neuroendocrine gland | 1.26e-11 | 4 |
regional part of diencephalon | 1.26e-11 | 4 |
artery wall | 2.02e-11 | 4 |
tunica adventitia of artery | 2.02e-11 | 4 |
adventitia | 2.02e-11 | 4 |
tunica adventitia of blood vessel | 2.02e-11 | 4 |
aorta tunica adventitia | 2.02e-11 | 4 |
aorta wall | 2.02e-11 | 4 |
regional part of forebrain | 1.15e-08 | 41 |
forebrain | 1.15e-08 | 41 |
anterior neural tube | 1.15e-08 | 41 |
future forebrain | 1.15e-08 | 41 |
neural tube | 2.26e-08 | 56 |
neural rod | 2.26e-08 | 56 |
future spinal cord | 2.26e-08 | 56 |
neural keel | 2.26e-08 | 56 |
mesenchyme of umbilical cord | 9.01e-08 | 6 |
regional part of cerebral cortex | 1.53e-07 | 22 |
central nervous system | 3.65e-07 | 81 |
diencephalon | 5.19e-07 | 7 |
future diencephalon | 5.19e-07 | 7 |
blood vessel layer | 6.78e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 2.63e-12 | 1 |
extraosseous chondrosarcoma | 2.63e-12 | 1 |
myxoid chondrosarcoma | 2.63e-12 | 1 |
extraskeletal myxoid chondrosarcoma | 2.63e-12 | 1 |