FFCP PHASE1:Hg19::chr4:38784592..38784619,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr4:38784592..38784619,-
|short_description=p1@TLR10
|description=CAGE_peak_1_at_TLR10_5end
|association_with_transcript=0bp_to_ENST00000502321,ENST00000507953...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=81793 | |EntrezGene=81793 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15634 | |HGNC=15634 | ||
|TSSclassifier=strong | |||
|UniProt=D6RHW6,D1CS21,Q9BXR5 | |UniProt=D6RHW6,D1CS21,Q9BXR5 | ||
|association_with_transcript=0bp_to_ENST00000502321,ENST00000507953,NM_001017388,NM_001195106,NM_001195107,NM_001195108,NM_030956_5end | |||
|cluster_id=chr4:38784592..38784619,- | |||
|coexpression_cluster_id=C651 | |||
|description=CAGE_peak_1_at_TLR10_5end | |||
|id=chr4:38784592..38784619,- | |||
|ontology_enrichment_celltype=CL:0000945!8.58e-27!24;CL:0000826!8.58e-27!24;CL:0000236!8.09e-18!14;CL:0002087!1.61e-15!119;CL:0000738!2.31e-15!140;CL:0000037!4.79e-12!172;CL:0000566!4.79e-12!172;CL:0002031!8.74e-12!124;CL:0000542!1.77e-11!53;CL:0000051!1.77e-11!53;CL:0000838!9.99e-11!52;CL:0000988!2.45e-10!182;CL:0002032!1.00e-09!165;CL:0000837!1.00e-09!165 | |||
|ontology_enrichment_celltype_v019=CL:0000945;2.33e-42;24!CL:0000236;1.16e-25;13!CL:0000542;1.86e-11;53!CL:0000784;8.41e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,2.20e-42,24;CL:0000826,2.20e-42,24;CL:0000236,1.38e-27,14;CL:0000542,5.51e-18,53;CL:0000051,5.51e-18,53;CL:0000838,9.10e-17,52;CL:0002087,2.56e-10,115;CL:0000738,3.17e-10,136;CL:0002031,2.14e-07,120;CL:0000037,5.11e-07,168;CL:0000784,8.34e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000051;1.86e-11;53!UBERON:0006601;6.04e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060058;4.26e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,4.25e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.32e-56!115;UBERON:0001049!7.38e-30!57;UBERON:0005068!7.38e-30!57;UBERON:0006241!7.38e-30!57;UBERON:0007135!7.38e-30!57;UBERON:0002616!1.58e-23!59;UBERON:0003080!3.31e-22!42;UBERON:0002780!1.47e-21!41;UBERON:0001890!1.47e-21!41;UBERON:0006240!1.47e-21!41;UBERON:0000955!7.16e-20!69;UBERON:0006238!7.16e-20!69;UBERON:0001017!2.04e-19!82;UBERON:0001893!3.03e-19!34;UBERON:0002020!3.10e-19!34;UBERON:0003528!3.10e-19!34;UBERON:0005743!1.51e-18!86;UBERON:0002791!1.83e-18!33;UBERON:0003075!9.83e-18!86;UBERON:0007284!9.83e-18!86;UBERON:0001869!2.19e-17!32;UBERON:0002346!5.13e-17!90;UBERON:0002619!5.17e-16!22;UBERON:0000073!2.63e-15!94;UBERON:0001016!2.63e-15!94;UBERON:0001950!2.61e-14!20;UBERON:0000956!2.31e-13!25;UBERON:0000203!2.31e-13!25;UBERON:0003056!1.40e-12!61;UBERON:0000153!3.16e-12!129;UBERON:0007811!3.16e-12!129;UBERON:0000033!9.74e-11!123;UBERON:0000178!2.35e-09!15;UBERON:0000179!2.35e-09!15;UBERON:0000463!2.35e-09!15;UBERON:0002390!4.11e-09!102;UBERON:0003061!4.11e-09!102;UBERON:0002298!8.93e-09!8;UBERON:0003076!9.42e-09!15;UBERON:0003057!9.42e-09!15;UBERON:0002193!1.43e-08!112;UBERON:0002420!1.52e-07!9;UBERON:0007245!1.52e-07!9;UBERON:0010009!1.52e-07!9;UBERON:0010011!1.52e-07!9;UBERON:0000454!1.52e-07!9;UBERON:0002308!1.82e-07!9;UBERON:0000125!1.82e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;3.50e-16;41!UBERON:0001890;3.50e-16;41!UBERON:0001893;5.30e-16;34!UBERON:0003528;8.31e-16;34!UBERON:0002020;8.31e-16;34!UBERON:0000073;8.61e-16;53!UBERON:0002616;8.61e-16;53!UBERON:0002791;1.16e-15;32!UBERON:0001869;1.91e-15;32!UBERON:0002619;4.69e-15;22!UBERON:0000956;7.68e-13;25!UBERON:0000203;7.68e-13;25!UBERON:0000178;1.10e-12;15!UBERON:0000179;1.10e-12;15!UBERON:0000463;1.10e-12;15!UBERON:0001950;1.27e-12;20!UBERON:0007023;1.41e-10;114!UBERON:0002298;1.58e-10;6!UBERON:0002390;5.09e-10;32!UBERON:0004177;5.24e-10;5!UBERON:0005057;5.24e-10;5!UBERON:0001017;1.50e-09;75!UBERON:0000955;4.50e-09;68!UBERON:0000125;5.55e-09;9!UBERON:0002308;5.55e-09;9!UBERON:0002420;5.81e-09;9!UBERON:0007245;5.81e-09;9!UBERON:0010009;5.81e-09;9!UBERON:0010011;5.81e-09;9!UBERON:0000454;5.81e-09;9!UBERON:0000349;1.88e-08;5!UBERON:0001016;6.20e-08;83!UBERON:0002106;4.20e-07;3!UBERON:0002193;5.28e-07;42!UBERON:0000200;5.97e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.99e-38,114;UBERON:0001049,1.11e-29,56;UBERON:0005068,1.11e-29,56;UBERON:0006241,1.11e-29,56;UBERON:0007135,1.11e-29,56;UBERON:0000073,8.02e-26,53;UBERON:0002616,8.02e-26,53;UBERON:0002780,8.58e-21,41;UBERON:0001890,8.58e-21,41;UBERON:0003080,8.58e-21,41;UBERON:0006240,8.58e-21,41;UBERON:0000955,2.00e-20,68;UBERON:0006238,2.00e-20,68;UBERON:0001893,6.45e-20,34;UBERON:0003528,6.66e-20,34;UBERON:0002020,6.66e-20,34;UBERON:0001017,1.51e-19,81;UBERON:0002791,1.58e-17,32;UBERON:0001869,2.72e-17,32;UBERON:0003075,4.06e-17,82;UBERON:0007284,4.06e-17,82;UBERON:0001016,1.34e-16,89;UBERON:0002346,7.11e-16,86;UBERON:0002619,4.89e-15,22;UBERON:0000956,7.96e-13,25;UBERON:0000203,7.96e-13,25;UBERON:0000178,9.64e-13,15;UBERON:0000179,9.64e-13,15;UBERON:0000463,9.64e-13,15;UBERON:0001950,1.28e-12,20;UBERON:0003056,8.94e-12,61;UBERON:0010371,1.62e-11,104;UBERON:0002298,1.86e-10,6;UBERON:0011216,2.16e-10,223;UBERON:0003076,4.74e-10,15;UBERON:0003057,4.74e-10,15;UBERON:0002420,4.62e-09,9;UBERON:0007245,4.62e-09,9;UBERON:0010009,4.62e-09,9;UBERON:0010011,4.62e-09,9;UBERON:0000454,4.62e-09,9;UBERON:0000125,5.94e-09,9;UBERON:0002308,5.94e-09,9;UBERON:0000349,1.32e-08,5;UBERON:0010314,7.71e-08,132;UBERON:0002106,4.29e-07,3;UBERON:0004854,4.29e-07,3;UBERON:0009034,4.29e-07,3;UBERON:0002095,4.29e-07,3;UBERON:0004782,4.29e-07,3;UBERON:0003281,4.29e-07,3;UBERON:0009664,4.29e-07,3;UBERON:0002296,4.29e-07,3;UBERON:0005602,4.29e-07,3;UBERON:0001179,4.29e-07,3;UBERON:0006293,4.29e-07,3;UBERON:0000200,5.06e-07,6;UBERON:0004177,5.58e-07,7;UBERON:0005057,5.58e-07,7 | |||
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|short_description=p1@TLR10 | |||
}} | }} |
Latest revision as of 16:11, 17 September 2015
Short description: | p1@TLR10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TLR10_5end |
Coexpression cluster: | C651_splenic_CD19_B_xeroderma_plasma_Burkitt_lymphoma |
Association with transcript: | 0bp_to_ENST00000502321, ENST00000507953, NM_001017388, NM_001195106, NM_001195107, NM_001195108, NM_030956_5end |
EntrezGene: | TLR10 |
HGNC: | 15634 |
UniProt: | D6RHW6D1CS21Q9BXR5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 2.20e-42 | 24 |
pro-B cell | 2.20e-42 | 24 |
B cell | 1.38e-27 | 14 |
lymphocyte | 5.51e-18 | 53 |
common lymphoid progenitor | 5.51e-18 | 53 |
lymphoid lineage restricted progenitor cell | 9.10e-17 | 52 |
nongranular leukocyte | 2.56e-10 | 115 |
leukocyte | 3.17e-10 | 136 |
hematopoietic lineage restricted progenitor cell | 2.14e-07 | 120 |
hematopoietic stem cell | 5.11e-07 | 168 |
plasmacytoid dendritic cell | 8.34e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 4.25e-07 | 10 |