FFCP PHASE1:Hg19::chr4:37892237..37892244,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr4:37892237..37892244,+
|short_description=p10@TBC1D1
|description=CAGE_peak_10_at_TBC1D1_5end
|association_with_transcript=-460bp_to_NM_001253912,NM_015173_5...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23216 | |EntrezGene=23216 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11578 | |HGNC=11578 | ||
|TSSclassifier=strong | |||
|UniProt=B9A6J6,Q7Z6H2,Q86TI0,Q8NC59 | |UniProt=B9A6J6,Q7Z6H2,Q86TI0,Q8NC59 | ||
|association_with_transcript=-460bp_to_NM_001253912,NM_015173_5end | |||
|cluster_id=chr4:37892237..37892244,+ | |||
|description=CAGE_peak_10_at_TBC1D1_5end | |||
|id=chr4:37892237..37892244,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;8.85e-19;3!UBERON:0003104;4.66e-11;31!UBERON:0010227;6.59e-08;1!UBERON:0004140;8.53e-08;1!UBERON:0010226;1.47e-07;1!UBERON:0005062;2.79e-07;4!UBERON:0007284;2.79e-07;4!UBERON:0009143;3.20e-07;1!UBERON:0006242;3.20e-07;1!UBERON:0005754;3.20e-07;1!UBERON:0004874;3.20e-07;1!UBERON:0006603;3.93e-07;65 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.41e-56!115;UBERON:0001049!2.21e-25!57;UBERON:0005068!2.21e-25!57;UBERON:0006241!2.21e-25!57;UBERON:0007135!2.21e-25!57;UBERON:0002616!4.18e-24!59;UBERON:0000955!8.10e-22!69;UBERON:0006238!8.10e-22!69;UBERON:0002020!2.95e-21!34;UBERON:0003528!2.95e-21!34;UBERON:0001869!4.50e-21!32;UBERON:0001893!5.27e-21!34;UBERON:0002780!1.05e-20!41;UBERON:0001890!1.05e-20!41;UBERON:0006240!1.05e-20!41;UBERON:0002791!3.91e-20!33;UBERON:0003080!5.36e-20!42;UBERON:0001017!2.16e-18!82;UBERON:0005743!3.56e-18!86;UBERON:0003075!3.67e-17!86;UBERON:0007284!3.67e-17!86;UBERON:0002346!7.36e-17!90;UBERON:0000956!4.05e-16!25;UBERON:0000203!4.05e-16!25;UBERON:0002619!1.99e-15!22;UBERON:0000073!3.06e-15!94;UBERON:0001016!3.06e-15!94;UBERON:0001950!1.40e-13!20;UBERON:0000153!4.07e-13!129;UBERON:0007811!4.07e-13!129;UBERON:0003056!3.07e-12!61;UBERON:0000033!5.38e-12!123;UBERON:0004733!7.69e-09!12;UBERON:0002028!7.69e-09!12;UBERON:0007277!7.69e-09!12;UBERON:0004732!5.52e-08!13;UBERON:0000062!5.42e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0005090;1.00e-13;2!UBERON:0001630;1.00e-13;2!UBERON:0007100;1.37e-11;25!UBERON:0002037;1.18e-09;6!UBERON:0004151;1.78e-09;3!UBERON:0001723;1.93e-09;3!UBERON:0003978;1.93e-09;3!UBERON:0000946;1.93e-09;3!UBERON:0001033;1.93e-09;3!UBERON:0004733;3.33e-08;12!UBERON:0002028;3.33e-08;12!UBERON:0002079;6.59e-08;1!UBERON:0002135;7.50e-08;1!UBERON:0001389;7.50e-08;1!UBERON:0000026;7.50e-08;1!UBERON:0008784;7.50e-08;1!UBERON:0006058;7.50e-08;1!UBERON:0003663;7.50e-08;1!UBERON:0004256;7.50e-08;1!UBERON:0004708;7.50e-08;1!UBERON:0002101;7.50e-08;1!UBERON:0004709;7.50e-08;1!UBERON:0002529;7.50e-08;1!UBERON:0010538;7.50e-08;1!UBERON:0003661;7.50e-08;1!UBERON:0010890;7.50e-08;1!UBERON:0002471;7.50e-08;1!UBERON:0001383;7.50e-08;1!UBERON:0010758;7.50e-08;1!UBERON:0010707;7.50e-08;1!UBERON:0000978;7.50e-08;1!UBERON:0002103;7.50e-08;1!UBERON:0001665;7.50e-08;1!UBERON:0003823;7.50e-08;1!UBERON:0000154;7.50e-08;1!UBERON:0010709;7.50e-08;1!UBERON:0004732;1.40e-07;13!UBERON:0002084;1.47e-07;1!UBERON:0002146;1.47e-07;1!UBERON:0002426;1.47e-07;1!UBERON:0003831;1.47e-07;1!UBERON:0003898;1.47e-07;1!UBERON:0004830;1.47e-07;1!UBERON:0002082;1.47e-07;1!UBERON:0005623;1.47e-07;1!UBERON:0003830;1.47e-07;1!UBERON:0005175;1.47e-07;1!UBERON:0001774;1.47e-07;1!UBERON:0001103;1.47e-07;1!UBERON:0000989;3.20e-07;1!UBERON:0000998;3.20e-07;1!UBERON:0000996;3.20e-07;1!UBERON:0008811;3.20e-07;1!UBERON:0006868;3.20e-07;1!UBERON:0007023;4.00e-07;114!UBERON:0000948;4.84e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,8.94e-24,114;UBERON:0005090,9.14e-14,2;UBERON:0001630,9.14e-14,2;UBERON:0003103,8.36e-13,68;UBERON:0007100,1.09e-10,27;UBERON:0002037,9.83e-10,6;UBERON:0006215,9.83e-10,6;UBERON:0004151,1.54e-09,3;UBERON:0003978,1.82e-09,3;UBERON:0009751,1.82e-09,3;UBERON:0000946,1.82e-09,3;UBERON:0002523,1.82e-09,3;UBERON:0005983,1.82e-09,3;UBERON:0002165,1.82e-09,3;UBERON:0002062,1.82e-09,3;UBERON:0007280,1.82e-09,3;UBERON:0001723,2.24e-09,3;UBERON:0001033,2.24e-09,3;UBERON:0010056,2.24e-09,3;UBERON:0004733,2.65e-08,12;UBERON:0002028,2.65e-08,12;UBERON:0007277,2.65e-08,12;UBERON:0002079,6.59e-08,1;UBERON:0002135,7.03e-08,1;UBERON:0005418,7.50e-08,1;UBERON:0001389,7.50e-08,1;UBERON:0000026,7.50e-08,1;UBERON:0008784,7.50e-08,1;UBERON:0006058,7.50e-08,1;UBERON:0003663,7.50e-08,1;UBERON:0004256,7.50e-08,1;UBERON:0004708,7.50e-08,1;UBERON:0002101,7.50e-08,1;UBERON:0004709,7.50e-08,1;UBERON:0002529,7.50e-08,1;UBERON:0010538,7.50e-08,1;UBERON:0003661,7.50e-08,1;UBERON:0010890,7.50e-08,1;UBERON:0002471,7.50e-08,1;UBERON:0001383,7.50e-08,1;UBERON:0004357,7.50e-08,1;UBERON:0004347,7.50e-08,1;UBERON:0005420,7.50e-08,1;UBERON:0005732,7.50e-08,1;UBERON:0010758,7.50e-08,1;UBERON:0010707,7.50e-08,1;UBERON:0000978,7.50e-08,1;UBERON:0002103,7.50e-08,1;UBERON:0001665,7.50e-08,1;UBERON:0003823,7.50e-08,1;UBERON:0000154,7.50e-08,1;UBERON:0010709,7.50e-08,1;UBERON:0005733,7.50e-08,1;UBERON:0005730,7.50e-08,1;UBERON:0004732,1.13e-07,13;UBERON:0002084,1.18e-07,1;UBERON:0002082,1.18e-07,1;UBERON:0010226,1.18e-07,1;UBERON:0002426,1.33e-07,1;UBERON:0003831,1.33e-07,1;UBERON:0003898,1.33e-07,1;UBERON:0004830,1.33e-07,1;UBERON:0003830,1.33e-07,1;UBERON:0005175,1.33e-07,1;UBERON:0001774,1.33e-07,1;UBERON:0001103,1.33e-07,1;UBERON:0010084,1.33e-07,1;UBERON:0002146,1.42e-07,1;UBERON:0005623,1.42e-07,1;UBERON:0000989,2.07e-07,1;UBERON:0008811,2.07e-07,1;UBERON:0006258,2.07e-07,1;UBERON:0005876,2.07e-07,1;UBERON:0004874,2.07e-07,1;UBERON:0000996,3.20e-07,1;UBERON:0000998,3.62e-07,1;UBERON:0006868,3.62e-07,1 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0.125542639594803,0.0764134057479513,0,0,0,0,0.154816123316076,0,0,0,0,0,0,1.66198622559563,0,0.434021741431704,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0.376484679085209,0,0,0,0,0,0,0,0.426224750532694,0,0,0,0.251248665256743,0,0,0,0,0.316462387440884,0,0,0,0.112328631146495,0,0.16072558669708,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0.569212969109448,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0.651083453856419,0,0.150575119077773,0,0,0.236777252044017,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0.432359860250884,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,2.99161459204025,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.9273691048295,0.366277859273374,0.165018999841176,0,0,0,0,0,0,0,0,0,0,0.445160178233687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0.476463550915578,0,0.648473311192717,0.540031437238115,0,0,0,0,0.185803175125719,0,0.284567373393656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0.111308705022906,0,0,0.796991953004279,0,0,0.20453736500431,0,0,0,0.358042349351218,0,2.46608514092334,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0.361789315876224,1.52581736317083,3.87027409759286,1.47773809476774,0,0,0,0.769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0.995261931078505,2.0345239835768,0,0,0,0,0.202203398942031,2.40773294189637,0,0,0.19566461893209,0,0.789168805698781,1.20990716048664,0.30607276163049,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,1.16386819786103,0,0.90392296312213,0,0,0.253243183823515,0.195551382734803,0,1.06726497369676,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.273810757783986,0,0,0,5.86493042671734,2.29160424011684,0,0.798716001995964,3.43380838509257,2.23171457441873,4.56847612909739,0.360299883542404,0,0,0,0,0,0,0.795229689809303,0.136203406111576,0,0,0,0,0,0.425246896606173,0,0.551639951094387,1.04909176269996,0,0,0,7.14695326373367,2.64836788146173,0,0.542999601753713,0,0,0,0,0,0,0,0,0.387848869084652,0.39669780522807,0,0,0.427149650270779,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0.886068179966986,0.122026264901963,0.250381861413,1.72022758707021,0.665574309221114,0.683060432355218,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425149840203366,0,0,0,0.70975570501128,0,0,0,0.449604575675217,0,0.638535436228605,0.205116364240755,0.252071696221718,0.345786262321089,0.161475645631851,0,0,0,0,0,0,0,0,0.300841313397029,0,0,0,0,0,0.270150338473579,0,0.413373593002368,0.253663240775627,0.546974809018219,0,1.98484471355718,0,0,0,0,0.606965604236632,0.682986574053893,0,0.115233987555779,0,0.339848664884159,0.263091094251396,0,0,1.41287567130925,0.471346769748006,0,0.913158720509496,0,0,1.71543706023975,0,0,0,0,0,0,0,0,0,0,1.27016115057279,0,0,0,0,0,0.121917924982269,5.82685953469105,2.05325613712494,1.1598144313382,0,2.10545517115895,0.596852325484105,0,0.45178432815584,0.109940516745429,0.150962843566674,0.231522474323834,0.218559560503957,0,0.490296643507811,0,0,0,0,0,0.657887425858975,0.322289439867886,0,0,0,0,0,0.458729283404541,0,0,0.407948941145488,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.303114792872958,0,0,0.103432995861895,3.62497769231668,0,0.193766729508018,0.496597714366863,0,0.445530107947154,0.202117188958219,5.44291869742403,2.05339980651169,0.202056159043763,0.0717222053926763,1.33064142618405,0,0,0,0,0,0.488965776731466,0,1.33151354837103,0.603821380773079,0 | |phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0.125542639594803,0.0764134057479513,0,0,0,0,0.154816123316076,0,0,0,0,0,0,1.66198622559563,0,0.434021741431704,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0.376484679085209,0,0,0,0,0,0,0,0.426224750532694,0,0,0,0.251248665256743,0,0,0,0,0.316462387440884,0,0,0,0.112328631146495,0,0.16072558669708,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0.569212969109448,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0.651083453856419,0,0.150575119077773,0,0,0.236777252044017,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0.432359860250884,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,2.99161459204025,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.9273691048295,0.366277859273374,0.165018999841176,0,0,0,0,0,0,0,0,0,0,0.445160178233687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0.476463550915578,0,0.648473311192717,0.540031437238115,0,0,0,0,0.185803175125719,0,0.284567373393656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0.111308705022906,0,0,0.796991953004279,0,0,0.20453736500431,0,0,0,0.358042349351218,0,2.46608514092334,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0.361789315876224,1.52581736317083,3.87027409759286,1.47773809476774,0,0,0,0.769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0.995261931078505,2.0345239835768,0,0,0,0,0.202203398942031,2.40773294189637,0,0,0.19566461893209,0,0.789168805698781,1.20990716048664,0.30607276163049,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,1.16386819786103,0,0.90392296312213,0,0,0.253243183823515,0.195551382734803,0,1.06726497369676,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.273810757783986,0,0,0,5.86493042671734,2.29160424011684,0,0.798716001995964,3.43380838509257,2.23171457441873,4.56847612909739,0.360299883542404,0,0,0,0,0,0,0.795229689809303,0.136203406111576,0,0,0,0,0,0.425246896606173,0,0.551639951094387,1.04909176269996,0,0,0,7.14695326373367,2.64836788146173,0,0.542999601753713,0,0,0,0,0,0,0,0,0.387848869084652,0.39669780522807,0,0,0.427149650270779,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0.886068179966986,0.122026264901963,0.250381861413,1.72022758707021,0.665574309221114,0.683060432355218,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425149840203366,0,0,0,0.70975570501128,0,0,0,0.449604575675217,0,0.638535436228605,0.205116364240755,0.252071696221718,0.345786262321089,0.161475645631851,0,0,0,0,0,0,0,0,0.300841313397029,0,0,0,0,0,0.270150338473579,0,0.413373593002368,0.253663240775627,0.546974809018219,0,1.98484471355718,0,0,0,0,0.606965604236632,0.682986574053893,0,0.115233987555779,0,0.339848664884159,0.263091094251396,0,0,1.41287567130925,0.471346769748006,0,0.913158720509496,0,0,1.71543706023975,0,0,0,0,0,0,0,0,0,0,1.27016115057279,0,0,0,0,0,0.121917924982269,5.82685953469105,2.05325613712494,1.1598144313382,0,2.10545517115895,0.596852325484105,0,0.45178432815584,0.109940516745429,0.150962843566674,0.231522474323834,0.218559560503957,0,0.490296643507811,0,0,0,0,0,0.657887425858975,0.322289439867886,0,0,0,0,0,0.458729283404541,0,0,0.407948941145488,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.303114792872958,0,0,0.103432995861895,3.62497769231668,0,0.193766729508018,0.496597714366863,0,0.445530107947154,0.202117188958219,5.44291869742403,2.05339980651169,0.202056159043763,0.0717222053926763,1.33064142618405,0,0,0,0,0,0.488965776731466,0,1.33151354837103,0.603821380773079,0 | ||
|short_description=p10@TBC1D1 | |||
}} | }} |
Latest revision as of 15:23, 17 September 2015
Short description: | p10@TBC1D1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_TBC1D1_5end |
Coexpression cluster: | NA |
Association with transcript: | -460bp_to_NM_001253912, NM_015173_5end |
EntrezGene: | TBC1D1 |
HGNC: | 11578 |
UniProt: | B9A6J6Q7Z6H2Q86TI0Q8NC59 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data