FFCP PHASE1:Hg19::chr4:36245578..36245601,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr4:36245578..36245601,-
|short_description=p4@ARAP2
|description=CAGE_peak_4_at_ARAP2_5end
|association_with_transcript=-17bp_to_ENST00000506189_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=116984 | |EntrezGene=116984 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16924 | |HGNC=16924 | ||
|TSSclassifier=strong | |||
|UniProt=D6RAD6 | |UniProt=D6RAD6 | ||
|association_with_transcript=-17bp_to_ENST00000506189_5end | |||
|cluster_id=chr4:36245578..36245601,- | |||
|description=CAGE_peak_4_at_ARAP2_5end | |||
|id=chr4:36245578..36245601,- | |||
|ontology_enrichment_celltype=CL:0002009!6.10e-27!65;CL:0002194!2.84e-25!63;CL:0000576!2.84e-25!63;CL:0000040!2.84e-25!63;CL:0000559!2.84e-25!63;CL:0000557!1.47e-24!71;CL:0000766!7.81e-23!76;CL:0000839!2.41e-22!70;CL:0000860!1.51e-20!45;CL:0002057!3.71e-20!42;CL:0000738!2.89e-18!140;CL:0002087!2.93e-16!119;CL:0002031!1.19e-15!124;CL:0000763!1.94e-15!112;CL:0000049!1.94e-15!112;CL:0000037!4.35e-12!172;CL:0000566!4.35e-12!172;CL:0000988!6.56e-12!182;CL:0002032!1.30e-11!165;CL:0000837!1.30e-11!165;CL:0000990!3.78e-08!8;CL:0000451!1.20e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000473;2.01e-19;39!CL:0000234;2.01e-19;39!CL:0000860;1.06e-18;33!CL:0002057;1.06e-18;33!CL:0000990;3.76e-13;8!CL:0000451;6.50e-13;10!CL:0000576;2.80e-12;48!CL:0000453;2.93e-09;5!CL:0000840;3.33e-09;5!CL:0000766;1.16e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,4.60e-27,61;CL:0002194,2.58e-24,59;CL:0000576,2.58e-24,59;CL:0000040,2.58e-24,59;CL:0000559,2.58e-24,59;CL:0000557,9.62e-24,67;CL:0000473,4.13e-22,48;CL:0000234,4.13e-22,48;CL:0000839,9.46e-21,66;CL:0000766,1.31e-19,72;CL:0000860,2.37e-18,42;CL:0002057,2.37e-18,42;CL:0000763,1.05e-14,108;CL:0000049,1.05e-14,108;CL:0000990,4.24e-13,8;CL:0000451,6.78e-13,10;CL:0000738,7.05e-12,136;CL:0002031,1.15e-10,120;CL:0002087,1.01e-09,115;CL:0000453,3.25e-09,5;CL:0000840,3.45e-09,5;CL:0001029,3.45e-09,5;CL:0000988,1.15e-08,177;CL:0002032,7.31e-08,161;CL:0000837,7.31e-08,161;CL:0000037,1.09e-07,168 | |||
|ontology_enrichment_development_v019=CL:0002057;1.95e-13;42!UBERON:0006601;7.89e-12;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.14e-31!57;UBERON:0005068!1.14e-31!57;UBERON:0006241!1.14e-31!57;UBERON:0007135!1.14e-31!57;UBERON:0007023!2.20e-30!115;UBERON:0002780!1.40e-28!41;UBERON:0001890!1.40e-28!41;UBERON:0006240!1.40e-28!41;UBERON:0003080!1.73e-27!42;UBERON:0002020!1.30e-25!34;UBERON:0003528!1.30e-25!34;UBERON:0001893!1.35e-25!34;UBERON:0002616!3.08e-25!59;UBERON:0002791!8.40e-25!33;UBERON:0001869!6.58e-24!32;UBERON:0003075!7.34e-23!86;UBERON:0007284!7.34e-23!86;UBERON:0001017!6.30e-22!82;UBERON:0000955!8.69e-22!69;UBERON:0006238!8.69e-22!69;UBERON:0005743!2.10e-21!86;UBERON:0002346!8.48e-21!90;UBERON:0002371!2.27e-19!80;UBERON:0000073!6.17e-19!94;UBERON:0001016!6.17e-19!94;UBERON:0002390!1.90e-18!102;UBERON:0003061!1.90e-18!102;UBERON:0000956!5.57e-18!25;UBERON:0000203!5.57e-18!25;UBERON:0001474!7.58e-18!86;UBERON:0003056!8.01e-18!61;UBERON:0002619!1.99e-17!22;UBERON:0002193!4.15e-16!112;UBERON:0001950!4.88e-16!20;UBERON:0004765!1.39e-13!101;UBERON:0001434!1.39e-13!101;UBERON:0002405!2.06e-13!115;UBERON:0000153!3.71e-12!129;UBERON:0007811!3.71e-12!129;UBERON:0000062!6.99e-12!511;UBERON:0000033!1.57e-11!123;UBERON:0004121!1.70e-09!169;UBERON:0002420!3.35e-09!9;UBERON:0007245!3.35e-09!9;UBERON:0010009!3.35e-09!9;UBERON:0010011!3.35e-09!9;UBERON:0000454!3.35e-09!9;UBERON:0002308!3.64e-09!9;UBERON:0000125!3.64e-09!9;UBERON:0000924!8.91e-09!173;UBERON:0006601!8.91e-09!173;UBERON:0009663!1.23e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;9.85e-35;34!UBERON:0003528;1.02e-33;34!UBERON:0002020;1.02e-33;34!UBERON:0002791;3.32e-33;32!UBERON:0001869;4.97e-33;32!UBERON:0002780;1.15e-32;41!UBERON:0001890;1.15e-32;41!UBERON:0000073;1.59e-29;53!UBERON:0002616;1.59e-29;53!UBERON:0002619;1.89e-29;22!UBERON:0001950;3.00e-29;20!UBERON:0000956;2.51e-25;25!UBERON:0000203;2.51e-25;25!UBERON:0001017;7.14e-20;75!UBERON:0000955;1.04e-18;68!UBERON:0002420;2.92e-17;9!UBERON:0007245;2.92e-17;9!UBERON:0010009;2.92e-17;9!UBERON:0010011;2.92e-17;9!UBERON:0000454;2.92e-17;9!UBERON:0000125;3.54e-17;9!UBERON:0002308;3.54e-17;9!UBERON:0001016;7.35e-16;83!UBERON:0009663;4.49e-14;7!UBERON:0000200;9.03e-12;6!UBERON:0007023;1.40e-10;114!UBERON:0002298;1.43e-10;6!UBERON:0004732;9.37e-10;13!UBERON:0001871;1.31e-09;6!UBERON:0001872;2.15e-09;5!UBERON:0000369;2.11e-08;4!UBERON:0002435;2.11e-08;4!UBERON:0000204;2.11e-08;4!UBERON:0004733;2.48e-08;12!UBERON:0002028;2.48e-08;12!UBERON:0002021;4.77e-07;5!UBERON:0005383;8.91e-07;3!UBERON:0005382;8.91e-07;3!UBERON:0001870;9.54e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,7.68e-57,56;UBERON:0005068,7.68e-57,56;UBERON:0006241,7.68e-57,56;UBERON:0007135,7.68e-57,56;UBERON:0000073,2.29e-52,53;UBERON:0002616,2.29e-52,53;UBERON:0002780,1.95e-45,41;UBERON:0001890,1.95e-45,41;UBERON:0003080,1.95e-45,41;UBERON:0006240,1.95e-45,41;UBERON:0001017,4.46e-42,81;UBERON:0000955,1.12e-41,68;UBERON:0006238,1.12e-41,68;UBERON:0003528,1.80e-40,34;UBERON:0002020,1.80e-40,34;UBERON:0001893,1.94e-40,34;UBERON:0001016,2.14e-38,89;UBERON:0003075,2.77e-38,82;UBERON:0007284,2.77e-38,82;UBERON:0002791,2.68e-37,32;UBERON:0001869,4.59e-37,32;UBERON:0002346,7.45e-36,86;UBERON:0002619,1.63e-29,22;UBERON:0001950,2.53e-29,20;UBERON:0007023,2.57e-29,114;UBERON:0003056,3.25e-29,61;UBERON:0010371,1.28e-28,104;UBERON:0000956,2.20e-25,25;UBERON:0000203,2.20e-25,25;UBERON:0010314,6.17e-22,132;UBERON:0002371,9.27e-20,76;UBERON:0001474,1.34e-17,82;UBERON:0002420,2.65e-17,9;UBERON:0007245,2.65e-17,9;UBERON:0010009,2.65e-17,9;UBERON:0010011,2.65e-17,9;UBERON:0000454,2.65e-17,9;UBERON:0000125,3.15e-17,9;UBERON:0002308,3.15e-17,9;UBERON:0002390,1.36e-16,98;UBERON:0003061,1.36e-16,98;UBERON:0004121,7.65e-16,171;UBERON:0000924,7.65e-16,171;UBERON:0006601,7.65e-16,171;UBERON:0004765,3.48e-15,90;UBERON:0002405,2.17e-14,93;UBERON:0002193,4.21e-14,108;UBERON:0009663,4.38e-14,7;UBERON:0001434,9.29e-14,100;UBERON:0003076,2.41e-12,15;UBERON:0003057,2.41e-12,15;UBERON:0011216,4.52e-12,223;UBERON:0000200,9.97e-12,6;UBERON:0002298,7.53e-11,6;UBERON:0000923,2.49e-10,560;UBERON:0010316,2.49e-10,560;UBERON:0005291,2.49e-10,560;UBERON:0006598,2.49e-10,560;UBERON:0010317,2.49e-10,560;UBERON:0002532,2.49e-10,560;UBERON:0000025,3.55e-10,192;UBERON:0002050,4.38e-10,564;UBERON:0004732,6.74e-10,13;UBERON:0001871,9.13e-10,6;UBERON:0001872,2.66e-09,5;UBERON:0005423,4.38e-09,581;UBERON:0000922,1.80e-08,592;UBERON:0004733,1.83e-08,12;UBERON:0002028,1.83e-08,12;UBERON:0007277,1.83e-08,12;UBERON:0000369,2.06e-08,4;UBERON:0002435,2.06e-08,4;UBERON:0000204,2.06e-08,4;UBERON:0010082,2.06e-08,4;UBERON:0002021,4.93e-07,5;UBERON:0005383,8.59e-07,3;UBERON:0005382,8.59e-07,3;UBERON:0001870,9.29e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.273748850145768,0.251085279189606,0.0764134057479513,0.0821005894499457,0.0787107813136792,0.393364276848904,0.383829398097213,0.309632246632152,0,0,0,0,0,0,3.87796785972314,0.802177789880567,1.08505435357926,1.34349284543955,1.6194683300949,0.515151135268373,0.436194716338694,0,0,0,0,1.54853185447552,25.3169305243492,12.808035326455,16.3172738623124,3.7922024881028,3.22742341791913,1.35426486594342,0.188242339542605,0.272906150057846,0.674170453335254,1.83650335422542,5.45579346029359,7.67204550958849,2.63881040149373,6.38283704389222,4.68847225585964,3.19230162491442,0.56738522469114,3.11411124497787,12.5624332628372,5.21482918420201,11.5110087693712,12.1079900526674,5.89244217580104,8.54448446090388,0.211255286311942,0.850417199860174,0.838634582033504,0,0.150176892841506,0.48217676009124,0.570025487482497,0.79566670879636,0.91332076882317,0,0,0,0.426730222566507,0,0,0,0,0.569212969109448,0,0,0,0,0,0,0.393010762749165,0.205601498999509,0,0.32592226663359,0,0,0,0,0,0,0.128091319725675,0,0.164437904603676,0,0.289803085735052,0.14828656316206,0,0,0,0,0.68725489096526,0,0,0,0,0.150575119077773,0,0,0.473554504088034,0,0.403213486449465,0,0.579297615531196,0,0,0,0,0,0,0,0,0.189069634328136,0.443458794925128,0.175669571386252,0.72038491523742,0,0,16.2273696827342,13.5821195093428,11.5673425651413,0.238490624305342,0,1.48583000531826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482022059766964,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0.492434012174795,8.89216207529103,2.37809859661965,0,0,0.141775097242386,0,0,0,0,0.176096868026452,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,1.09970290300263,2.43247561282381,0.502257091432126,6.32501818449095,0,0,0,0,0,0,0,0.591092280605782,1.07813787429759,0.641715181398742,1.52456774533478,0,0,0.167516265334349,0,2.24702107184155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.431428401637234,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.515205058238611,0.183138929636687,0.082509499920588,0,0,0,0,0,0,0,0,0,0.511359764496605,0,0,0.384380134730212,1.78657797492418,0.910420027699949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0.376575203107117,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0.211673582723883,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0.561421621224659,0.439524537815682,0.121360521749513,0,0,0.71623345421307,0,0.614321404198464,2.98244294329889,7.03347082052564,0,0,0,0.398495976502139,0,0,0.818149460017238,0.246169610922139,0,0.269605053441981,0.179021174675609,0,0.295930216910801,0,0,4.84666373047609,4.08179631912146,0,0,0.0874599999961957,0,0,0.508507300585533,0,0,0,0,8.85741385813839,5.66803261539417,0,2.32216445855572,1.18219047581419,1.09692698576986,0,0,0.230850775511391,0.113942055847001,0,0,0,1.27600463892768,0.366390373607449,1.5991043280559,0,0.31396051279005,0.166211681900156,0,0,0,0,0,0.210998064528027,1.14262965711403,0,0,0.995261931078505,0.707660516026713,0,15.715619820073,4.07760998523459,4.49014382873458,3.70706231393724,0.802577647298789,7.73072670893619,0,0.391329237864179,0,0,4.83962864194656,0,0.252746318513952,0.300646838828985,0,0,0,0,0,0,0,0,0.391969589657511,0.0870592065804026,0.698906672968121,0,0.19351266257817,0.146178634172371,0.0821154570532092,0.290967049465258,0,0,0,0,7.53398471874956,0,0,0.426905989478705,0,0,0,0,0,0.248505071130865,0.235694034616795,0,0,0,0,9.60672461935663,15.0595916781192,0,0,0,0.558564802544508,0,1.43574604915363,0,0,0,0.0671834724867263,0,0,0,0,0.0674035438541849,0.0984274815147488,0,0.795229689809303,9.12562820947556,0,0,0,6.29926896344201,15.476039091159,3.58422384282346,0,0.315222829196793,0.104909176269996,0.105600336519406,0,0.383830394638891,0,0.662091970365432,0,0,0,0,0,0.082092520749339,0.170388021785422,0,0.293104467356165,0,2.97350799631566,5.68600187493567,0,0,1.49502377594773,0.943225830597996,2.89967338743037,0.496166021811951,0.197611631897944,0,0,1.08803560673895,0,0.612691153526923,0.327872630709804,0,2.65820453990096,5.97928698019619,12.51909307065,1.72022758707021,7.09945929835855,1.80079568530012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.477890301491107,0,0,0,0,0,0.901545653983311,0.380805212168795,0.813741466409323,0,0.537052785212442,0,0.398095888698616,0,0,0,0,0,0.643324774124777,0.260994291965212,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,15.0701695405387,2.72804432375144,1.32864840313363,1.14495775979091,0,0.245772908753719,0.211312123358627,6.59958406321269,0,0,0,0,0,0,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| ||
|short_description=p4@ARAP2 | |||
}} | }} |
Latest revision as of 14:42, 17 September 2015
Short description: | p4@ARAP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ARAP2_5end |
Coexpression cluster: | NA |
Association with transcript: | -17bp_to_ENST00000506189_5end |
EntrezGene: | ARAP2 |
HGNC: | 16924 |
UniProt: | D6RAD6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage dendritic cell progenitor | 4.60e-27 | 61 |
monopoietic cell | 2.58e-24 | 59 |
monocyte | 2.58e-24 | 59 |
monoblast | 2.58e-24 | 59 |
promonocyte | 2.58e-24 | 59 |
granulocyte monocyte progenitor cell | 9.62e-24 | 67 |
defensive cell | 4.13e-22 | 48 |
phagocyte | 4.13e-22 | 48 |
myeloid lineage restricted progenitor cell | 9.46e-21 | 66 |
myeloid leukocyte | 1.31e-19 | 72 |
classical monocyte | 2.37e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.37e-18 | 42 |
myeloid cell | 1.05e-14 | 108 |
common myeloid progenitor | 1.05e-14 | 108 |
conventional dendritic cell | 4.24e-13 | 8 |
dendritic cell | 6.78e-13 | 10 |
leukocyte | 7.05e-12 | 136 |
hematopoietic lineage restricted progenitor cell | 1.15e-10 | 120 |
nongranular leukocyte | 1.01e-09 | 115 |
Langerhans cell | 3.25e-09 | 5 |
immature conventional dendritic cell | 3.45e-09 | 5 |
common dendritic progenitor | 3.45e-09 | 5 |
hematopoietic cell | 1.15e-08 | 177 |
hematopoietic oligopotent progenitor cell | 7.31e-08 | 161 |
hematopoietic multipotent progenitor cell | 7.31e-08 | 161 |
hematopoietic stem cell | 1.09e-07 | 168 |