FFCP PHASE1:Hg19::chr4:188508175..188508193,-: Difference between revisions
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|id=chr4:188508175..188508193,-
|short_description=p@chr4:188508175..188508193,-
|description=CAGE_peak_at_chr4:188508175..188508193,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr4:188508175..188508193,- | |||
|coexpression_cluster_id=C356 | |||
|description=CAGE_peak_at_chr4:188508175..188508193,- | |||
|id=chr4:188508175..188508193,- | |||
|ontology_enrichment_celltype=CL:1000415!1.29e-24!2;CL:1001319!2.95e-13!1;CL:1000600!2.95e-13!1;CL:0000054!4.17e-07!2;CL:0000137!4.17e-07!2;CL:0000092!4.17e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:1000415;6.96e-21;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1000415,6.96e-21,2 | |||
|ontology_enrichment_development_v019=UBERON:0009847;1.60e-14;3!UBERON:0003353;1.60e-14;3!UBERON:0007123;2.74e-09;5 | |||
|ontology_enrichment_disease=DOID:3112!1.82e-13!1;DOID:2513!2.32e-13!1;DOID:0060085!6.06e-13!1;DOID:3165!6.06e-13!1;DOID:0060121!6.06e-13!1;DOID:2438!6.06e-13!1;DOID:4418!6.06e-13!1;DOID:4960!7.68e-13!1;DOID:0070004!7.68e-13!1;DOID:7!1.31e-10!39;DOID:305!6.21e-10!106;DOID:3451!2.58e-07!2;DOID:4159!2.58e-07!2;DOID:0060122!2.58e-07!2;DOID:200!4.17e-07!2;DOID:4305!4.17e-07!2;DOID:0050687!5.12e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:3112;9.91e-41;1!DOID:2513;2.21e-40;1!DOID:3451;5.70e-21;2!DOID:4159;5.70e-21;2!DOID:0060122;5.70e-21;2!DOID:7;9.45e-09;39 | |||
|ontology_enrichment_disease_v019_2=DOID:3112,9.91e-41,1;DOID:2513,2.21e-40,1;DOID:3451,5.70e-21,2;DOID:4159,5.70e-21,2;DOID:0060122,5.70e-21,2;DOID:7,5.37e-10,39;DOID:305,5.66e-10,106;DOID:0050687,1.55e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0002110!9.26e-17!3;UBERON:0006242!9.26e-17!3;UBERON:0002294!7.90e-16!7;UBERON:0001173!7.90e-16!7;UBERON:0004912!7.90e-16!7;UBERON:0004645!2.95e-13!1;UBERON:0001256!2.95e-13!1;UBERON:0001259!2.95e-13!1;UBERON:0000014!9.20e-13!4;UBERON:0002046!2.47e-10!5;UBERON:0004117!2.47e-10!5;UBERON:0007689!2.47e-10!5;UBERON:0007123!2.47e-10!5;UBERON:0003091!2.47e-10!5;UBERON:0003929!4.61e-10!54;UBERON:0006554!2.82e-09!44;UBERON:0001008!4.62e-09!45;UBERON:0005911!2.49e-08!82;UBERON:0000162!3.77e-08!14;UBERON:0001353!3.77e-08!14;UBERON:0000163!3.77e-08!14;UBERON:0006866!3.77e-08!14;UBERON:0000164!3.77e-08!14;UBERON:0000931!3.77e-08!14;UBERON:0004122!1.22e-07!15;UBERON:0001255!2.91e-07!2;UBERON:0001556!2.91e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002110;2.09e-14;3!UBERON:0000014;3.42e-11;4!UBERON:0002046;2.74e-09;5!UBERON:0002294;6.39e-07;7!UBERON:0001173;6.39e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002110,2.09e-14,3;UBERON:0006242,2.09e-14,3;UBERON:0000014,3.42e-11,4;UBERON:0002046,2.74e-09,5;UBERON:0004117,2.74e-09,5;UBERON:0007689,2.74e-09,5;UBERON:0007123,2.74e-09,5;UBERON:0003091,2.74e-09,5;UBERON:0003929,2.17e-07,54 | |||
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|short_description=p@chr4:188508175..188508193,- | |||
}} | }} |
Latest revision as of 04:11, 30 July 2015
Short description: | p@chr4:188508175..188508193, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:188508175..188508193, - |
Coexpression cluster: | C356_renal_Smooth_Chondrocyte_thyroid_serous_Small_mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of gall bladder | 6.96e-21 | 2 |
Ontology term | p-value | n |
---|---|---|
gallbladder | 2.09e-14 | 3 |
gall bladder primordium | 2.09e-14 | 3 |
zone of skin | 3.42e-11 | 4 |
thyroid gland | 2.74e-09 | 5 |
pharyngeal pouch | 2.74e-09 | 5 |
thyroid diverticulum | 2.74e-09 | 5 |
pharyngeal pouch 2 | 2.74e-09 | 5 |
thyroid primordium | 2.74e-09 | 5 |
gut epithelium | 2.17e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 9.91e-41 | 1 |
basal cell carcinoma | 2.21e-40 | 1 |
skin carcinoma | 5.70e-21 | 2 |
skin cancer | 5.70e-21 | 2 |
integumentary system cancer | 5.70e-21 | 2 |
disease of anatomical entity | 5.37e-10 | 39 |
carcinoma | 5.66e-10 | 106 |
cell type cancer | 1.55e-07 | 143 |