FFCP PHASE1:Hg19::chr4:1164956..1164968,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr4:1164956..1164968,-
|short_description=p16@SPON2
|description=CAGE_peak_16_at_SPON2_5end
|association_with_transcript=-98bp_to_ENST00000509697_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10417 | |EntrezGene=10417 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11253 | |HGNC=11253 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-98bp_to_ENST00000509697_5end | |||
|cluster_id=chr4:1164956..1164968,- | |||
|coexpression_cluster_id=C574 | |||
|description=CAGE_peak_16_at_SPON2_5end | |||
|id=chr4:1164956..1164968,- | |||
|ontology_enrichment_celltype=CL:0002334!1.16e-13!12;CL:0000048!7.01e-11!430;CL:0000057!1.31e-10!75;CL:0000723!2.15e-10!436;CL:0000034!9.05e-10!444;CL:0000055!2.26e-09!180;CL:0002570!4.75e-07!8;CL:0002371!7.47e-07!591;CL:0002320!9.74e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000134;4.32e-09;55!CL:0002504;7.20e-09;3!CL:1000279;7.20e-09;3!CL:1000280;7.20e-09;3!CL:0002622;7.62e-09;3!CL:0002615;9.23e-09;3!CL:0002569;1.01e-08;6!CL:0000048;7.74e-07;58!CL:0002568;9.23e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002622,6.67e-09,3;CL:0002504,6.94e-09,3;CL:1000279,6.94e-09,3;CL:1000280,6.94e-09,3;CL:0002569,8.48e-09,6;CL:0002615,1.06e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0004874;9.23e-07;1 | |||
|ontology_enrichment_disease=DOID:2394!1.06e-09!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002100!3.20e-10!216;UBERON:0003688!6.50e-10!6;UBERON:0002358!6.50e-10!6;UBERON:0003684!6.50e-10!6;UBERON:0001178!6.50e-10!6;UBERON:0000914!1.93e-09!83;UBERON:0002329!1.93e-09!83;UBERON:0003077!1.93e-09!83;UBERON:0003059!1.93e-09!83;UBERON:0007282!1.93e-09!83;UBERON:0009618!1.93e-09!83;UBERON:0007285!1.93e-09!83;UBERON:0004290!6.06e-09!70;UBERON:0005256!2.00e-08!143;UBERON:0004923!1.44e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0003422;1.01e-08;6!UBERON:0003104;1.53e-07;7!UBERON:0009142;1.53e-07;7!UBERON:0000989;9.23e-07;1!UBERON:0008811;9.23e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003422,8.48e-09,6;UBERON:0000989,8.02e-07,1;UBERON:0008811,8.02e-07,1;UBERON:0006258,8.02e-07,1;UBERON:0005876,8.02e-07,1;UBERON:0004874,8.02e-07,1 | |||
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| ||
|short_description=p16@SPON2 | |||
}} | }} |
Latest revision as of 20:23, 24 September 2015
Short description: | p16@SPON2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_SPON2_5end |
Coexpression cluster: | C574_Mesenchymal_Fibroblast_Smooth_Prostate_Adipocyte_Hair_mesenchymal |
Association with transcript: | -98bp_to_ENST00000509697_5end |
EntrezGene: | SPON2 |
HGNC: | 11253 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
prostate stromal cell | 6.67e-09 | 3 |
enteric smooth muscle cell | 6.94e-09 | 3 |
smooth muscle cell of large intestine | 6.94e-09 | 3 |
smooth muscle cell of colon | 6.94e-09 | 3 |
mesenchymal stem cell of umbilical cord | 8.48e-09 | 6 |
adipocyte of omentum tissue | 1.06e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
mesenchyme of umbilical cord | 8.48e-09 | 6 |
penis | 8.02e-07 | 1 |
intromittent organ | 8.02e-07 | 1 |
lateral plate mesenchyme | 8.02e-07 | 1 |
undifferentiated genital tubercle | 8.02e-07 | 1 |
somatopleure | 8.02e-07 | 1 |