FFCP PHASE1:Hg19::chr3:93781728..93781739,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:93781728..93781739,+
|short_description=p5@NSUN3
|description=CAGE_peak_5_at_NSUN3_5end
|association_with_transcript=-20bp_to_ENST00000314622_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=63899 | |EntrezGene=63899 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26208 | |HGNC=26208 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H649 | |UniProt=Q9H649 | ||
|association_with_transcript=-20bp_to_ENST00000314622_5end | |||
|cluster_id=chr3:93781728..93781739,+ | |||
|coexpression_cluster_id=C33 | |||
|description=CAGE_peak_5_at_NSUN3_5end | |||
|id=chr3:93781728..93781739,+ | |||
|ontology_enrichment_celltype=CL:0002057!3.94e-07!42;CL:0000839!5.70e-07!70;CL:0000860!7.50e-07!45 | |||
|ontology_enrichment_celltype_v019=CL:0000764;1.54e-12;2!CL:0000558;1.54e-12;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,1.55e-12,2;CL:0000765,1.55e-12,2;CL:0000050,1.55e-12,2;CL:0000038,1.55e-12,2;CL:0000558,1.55e-12,2;CL:0000547,1.55e-12,2;CL:0000549,1.55e-12,2;CL:0000550,1.55e-12,2;CL:0000552,1.55e-12,2 | |||
|ontology_enrichment_development_v019=UBERON:0010122;7.19e-12;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.54e-24!115;UBERON:0001049!1.43e-15!57;UBERON:0005068!1.43e-15!57;UBERON:0006241!1.43e-15!57;UBERON:0007135!1.43e-15!57;UBERON:0002616!8.31e-14!59;UBERON:0001017!4.84e-12!82;UBERON:0002780!1.72e-11!41;UBERON:0001890!1.72e-11!41;UBERON:0006240!1.72e-11!41;UBERON:0005743!1.89e-11!86;UBERON:0003075!2.22e-11!86;UBERON:0007284!2.22e-11!86;UBERON:0000955!5.06e-11!69;UBERON:0006238!5.06e-11!69;UBERON:0003080!6.27e-11!42;UBERON:0002346!4.72e-10!90;UBERON:0002020!6.27e-10!34;UBERON:0003528!6.27e-10!34;UBERON:0000073!1.04e-09!94;UBERON:0001016!1.04e-09!94;UBERON:0001893!1.37e-09!34;UBERON:0002791!4.08e-09!33;UBERON:0001869!6.79e-09!32;UBERON:0002390!1.93e-08!102;UBERON:0003061!1.93e-08!102;UBERON:0002193!3.37e-08!112;UBERON:0002308!6.86e-08!9;UBERON:0000125!6.86e-08!9;UBERON:0003056!2.91e-07!61;UBERON:0009663!9.59e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.52e-17;15!UBERON:0000179;3.52e-17;15!UBERON:0000463;3.52e-17;15!UBERON:0005383;1.01e-16;3!UBERON:0005382;1.01e-16;3!UBERON:0000369;1.13e-12;4!UBERON:0002435;1.13e-12;4!UBERON:0000204;1.13e-12;4!UBERON:0009663;2.16e-12;7!UBERON:0001894;3.67e-12;7!UBERON:0001873;7.19e-12;2!UBERON:0002133;1.89e-11;2!UBERON:0002420;1.16e-09;9!UBERON:0000125;1.16e-09;9!UBERON:0007245;1.16e-09;9!UBERON:0002308;1.16e-09;9!UBERON:0010009;1.16e-09;9!UBERON:0010011;1.16e-09;9!UBERON:0000454;1.16e-09;9!UBERON:0003978;6.46e-08;3!UBERON:0004151;6.46e-08;3!UBERON:0000946;6.46e-08;3!UBERON:0007023;1.88e-07;114!UBERON:0002390;3.97e-07;32!UBERON:0002780;5.55e-07;41!UBERON:0001890;5.55e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.09e-24,114;UBERON:0000178,2.00e-17,15;UBERON:0000179,2.00e-17,15;UBERON:0000463,2.00e-17,15;UBERON:0005383,1.45e-16,3;UBERON:0005382,1.45e-16,3;UBERON:0000369,1.47e-12,4;UBERON:0002435,1.47e-12,4;UBERON:0000204,1.47e-12,4;UBERON:0010082,1.47e-12,4;UBERON:0009663,2.75e-12,7;UBERON:0001894,5.74e-12,7;UBERON:0006222,5.74e-12,7;UBERON:0001873,6.15e-12,2;UBERON:0010122,6.15e-12,2;UBERON:0002133,1.11e-11,2;UBERON:0003075,4.56e-11,82;UBERON:0007284,4.56e-11,82;UBERON:0001049,6.31e-11,56;UBERON:0005068,6.31e-11,56;UBERON:0006241,6.31e-11,56;UBERON:0007135,6.31e-11,56;UBERON:0002346,2.04e-10,86;UBERON:0000073,1.07e-09,53;UBERON:0002616,1.07e-09,53;UBERON:0002420,1.39e-09,9;UBERON:0000125,1.39e-09,9;UBERON:0007245,1.39e-09,9;UBERON:0002308,1.39e-09,9;UBERON:0010009,1.39e-09,9;UBERON:0010011,1.39e-09,9;UBERON:0000454,1.39e-09,9;UBERON:0002780,1.37e-08,41;UBERON:0001890,1.37e-08,41;UBERON:0003080,1.37e-08,41;UBERON:0006240,1.37e-08,41;UBERON:0010371,4.17e-08,104;UBERON:0001017,4.22e-08,81;UBERON:0003978,4.56e-08,3;UBERON:0009751,4.56e-08,3;UBERON:0000946,4.56e-08,3;UBERON:0002523,4.56e-08,3;UBERON:0005983,4.56e-08,3;UBERON:0002165,4.56e-08,3;UBERON:0002062,4.56e-08,3;UBERON:0007280,4.56e-08,3;UBERON:0004151,4.89e-08,3;UBERON:0010314,9.54e-08,132;UBERON:0001016,4.59e-07,89;UBERON:0000955,5.06e-07,68;UBERON:0006238,5.06e-07,68 | |||
|phase1_expression=0.181678379270557,0,0.422863212287913,1.0007329835313,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0.487932798790507,0,0.204000691244253,0,0.286235987131057,0.136874425072884,0,0.229240217243854,0.0821005894499457,0.314843125254717,1.18009283054671,0.767658796194425,0,0,0,0.369754010166788,0,0,0,0,0.200544447470142,0.434021741431704,0.223915474239924,0,0,0.436194716338694,1.13362783106643,0.242584061187816,0.697287110717054,0.822335776043652,0.309706370895104,0.575384784644301,0,0.47296445977717,0.689491361473237,0,0,0.752969358170419,0.272906150057846,1.12361742222542,0.306083892370903,0.962787081228281,0,0.989553900560148,0.598390972864896,0,0.290209238628584,0.56738522469114,0,0,1.0429658368404,0.65156653411535,0.605399502633369,1.47311054395026,1.26584954976354,0,0.637812899895131,0.209658645508376,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0.263384084775077,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0.255973222308837,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0,0.567208902984407,0,0,0.261958150995425,0,0,0.649094787309367,0.870648686496336,0.531831842075461,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0.71153252537342,0.33472061276467,0,0,0,0.367663080345869,0,0.17859945656816,0,0.112611480483322,0,0,0,0,3.87780264148325,0,0,0.25326102332916,0.132409180813219,0.286836620748814,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0.149448680551801,0,0,0,0.204154171254893,0,0,0,0,0,0,0.336672227908132,0,0,0,0,0.150238058906597,0.113432183160021,0,0,0,0,0,0,0.18611685633159,0,0.0974370051611986,0,0,0,0,0.302256294682921,0.169560592310488,0,0,0,0.243947412259191,0.265059536642971,0,0.10366105501537,0.504641701751257,0.72995471815166,0,0,0,0,0,0.118306800039844,0.337169380156203,1.20505514941741,0.110293972732394,0.217879444092406,0.237270619111097,0.269662616320329,0.196221465125346,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0.100528972411631,0,0,0,0,0,0.234817388471643,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0.335964256397719,0,0,0,0,0.985326475791887,0.616339038092582,0.621984346622316,0,0.25248486685276,0.126995788584338,0.381988425558278,0,0,0.205654985406647,0,0,0,0,0,0,0,0,0.531876233169741,0,0,0,0,0,0,0,0.325736184293735,0.355391948742546,0,0.301439377059586,0,0.299918973546171,0,0,0,0.239624855491583,0,0,0.144781306667579,0,0.179060963239896,0.112085143993527,0.197030760201927,0.215627574859517,0.128343036279748,0.76228387266739,0,1.54657762555539,0,0,0,0,1.24324654030811,0.24538298343828,0,0.271265023699736,0,0.178428988797162,0,0,0,0,0,0,0.184369168541703,0,0.195801157462741,0,0,0.215714200818617,0.106727557803444,0,0,0,0.744323423456331,0.306923946576125,0.280660094433074,0.256278298511402,0.511707249066704,0,0,0,0.177561725313127,0.246381468041427,0,0,0,0,0.0920809889358963,0.229628896329213,0,0,0,0.15403067420883,0,0,0.105551628892876,0,0,0.431831832204279,0,0.270946437543853,0,0,0,0,8.77039506583738,8.88880533484662,0,0,0,0.515205058238611,0,0.082509499920588,0,0.650060246036521,0,0.096670718292122,0,0,0.137836572484531,0.107420244868274,0,0,0,0.165284915360978,0,0,0,0.464845549297286,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0.243713489631284,0,0.272999822815972,0,0,0,0,0.438450885253763,0.578775534266688,0.655894752046633,0,0,0,0.143411352204052,0,0,0,0,0,0.379473173765715,0,0.0962221127255121,0,0,0.564862804660675,0,0,0,0,3.04468565539302,5.35246044999663,0,0.476463550915578,1.64544909234478,3.8908398671563,5.40031437238115,1.58625035258854,0,0,0,0,0.144269212976445,0.142283686696828,0,0,0,0,0,0,0,0.156679895773023,0,0.338583555603207,0,0,0,0,0,0.447352215784832,0.333698283423817,0,0,0,0,0.33307196799782,0,0,0,0,0.111443384277478,0,0,0,0,0,0.844016498463076,0,0,0,0.597743964753209,0,0,0.102268682502155,0.738508832766417,0.311039587661807,0,0.179021174675609,0.511572370226872,0.295930216910801,2.3948309234694,0,0,0.185536196323703,0,0,0.0874599999961957,0,0.1137934482855,0,0,0,0,0,3.54296554325536,1.32656082487949,1.52581736317083,0.663475559587348,0.295547618953547,0,0.10893846351899,0,0.153900517007594,0.227884111694002,0,0,0,0,0.0915975934018623,0,0,0,0.166211681900156,0,0,0,0.569261198172555,0,0.210998064528027,0.163232808159148,0,0,0,0.0884575645033392,0,0,0,0.104421949505455,0.202203398942031,0,1.87411556580271,0,0,0.242780379534093,0,0,0,0.442306057399416,0.60129367765797,0,0,0,0.313932918407225,0,0,0,0.173559738335131,0,0,0.17472666824203,0,0.0967563312890851,0,0.0821154570532092,0.387956065953678,0,0.225980740780532,0,0,0.759729551470544,0.195551382734803,0.0801588202515337,0.213452994739353,0,0,0,0.171594997861965,0.14405479798815,0.124252535565433,0,0,0.104602846312333,0.101998217636322,0,1.20084057741958,0.821432273351958,0,0,0.262887354279314,1.39641200636127,0.458320848023367,1.43574604915363,0,0,0.446342914883745,0.134366944973453,0,0,0.315132729228895,0.247247575143499,0.0674035438541849,0.393709926058995,0.0846733320657845,1.59045937961861,0.681017030557878,0.482259445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| ||
|short_description=p5@NSUN3 | |||
}} | }} |
Latest revision as of 19:55, 19 September 2015
Short description: | p5@NSUN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_NSUN3_5end |
Coexpression cluster: | C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen |
Association with transcript: | -20bp_to_ENST00000314622_5end |
EntrezGene: | NSUN3 |
HGNC: | 26208 |
UniProt: | Q9H649 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 1.55e-12 | 2 |
erythroblast | 1.55e-12 | 2 |
megakaryocyte-erythroid progenitor cell | 1.55e-12 | 2 |
erythroid progenitor cell | 1.55e-12 | 2 |
reticulocyte | 1.55e-12 | 2 |
proerythroblast | 1.55e-12 | 2 |
basophilic erythroblast | 1.55e-12 | 2 |
polychromatophilic erythroblast | 1.55e-12 | 2 |
orthochromatic erythroblast | 1.55e-12 | 2 |