FFCP PHASE1:Hg19::chr3:55515007..55515012,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:55515007..55515012,-
|short_description=p30@WNT5A
|description=CAGE_peak_30_at_WNT5A_5end
|association_with_transcript=-46bp_to_uc003dhm.2_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7474 | |EntrezGene=7474 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12784 | |HGNC=12784 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-46bp_to_uc003dhm.2_5end | |||
|cluster_id=chr3:55515007..55515012,- | |||
|coexpression_cluster_id=C4338 | |||
|description=CAGE_peak_30_at_WNT5A_5end | |||
|id=chr3:55515007..55515012,- | |||
|ontology_enrichment_celltype=CL:0002537!5.88e-08!5;CL:0002552!1.10e-07!5;CL:0000197!7.55e-07!6;CL:0000098!7.55e-07!6;CL:0002167!7.55e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002552;1.28e-11;5!CL:0002537;1.85e-11;5!CL:0000134;8.23e-08;55!CL:0000048;2.89e-07;58!CL:0000349;8.63e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002552,1.21e-11,5;CL:0002537,1.95e-11,5;CL:0000349,9.17e-07,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!1.12e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:17;1.85e-11;5!DOID:450;1.85e-11;5!DOID:66;1.85e-11;5!DOID:423;1.85e-11;5!DOID:0080000;1.85e-11;5!DOID:11722;1.85e-11;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,2.29e-11,5;DOID:450,2.29e-11,5;DOID:66,2.29e-11,5;DOID:423,2.29e-11,5;DOID:0080000,2.29e-11,5;DOID:11722,2.29e-11,5 | |||
|ontology_enrichment_uberon=UBERON:0000305!2.62e-08!7;UBERON:0005631!2.27e-07!14;UBERON:0000158!2.27e-07!14;UBERON:0004871!3.29e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0001282;1.84e-14;1!UBERON:0009842;1.84e-14;1!UBERON:0003704;1.84e-14;1!UBERON:0001171;1.84e-14;1!UBERON:0001172;1.84e-14;1!UBERON:0005631;2.04e-12;10!UBERON:0000158;2.04e-12;10!UBERON:0000305;1.92e-08;7!UBERON:0001828;1.35e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001282,1.61e-14,1;UBERON:0009842,1.61e-14,1;UBERON:0003704,1.61e-14,1;UBERON:0001171,1.61e-14,1;UBERON:0001172,1.61e-14,1;UBERON:0005631,5.37e-09,14;UBERON:0000158,5.37e-09,14;UBERON:0000305,1.99e-08,7;UBERON:0001828,1.31e-07,8;UBERON:0004871,1.76e-07,8;UBERON:0004923,6.69e-07,66 | |||
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| ||
|short_description=p30@WNT5A | |||
}} | }} |
Latest revision as of 02:53, 19 September 2015
Short description: | p30@WNT5A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_30_at_WNT5A_5end |
Coexpression cluster: | C4338_mesenchymal_Chondrocyte_Olfactory_Fibroblast_Hair_cholangiocellular_Mesenchymal |
Association with transcript: | -46bp_to_uc003dhm.2_5end |
EntrezGene: | WNT5A |
HGNC: | 12784 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of gingiva | 1.21e-11 | 5 |
amnion mesenchymal stem cell | 1.95e-11 | 5 |
extraembryonic cell | 9.17e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
intralobular bile duct | 1.61e-14 | 1 |
acinus | 1.61e-14 | 1 |
intrahepatic bile duct | 1.61e-14 | 1 |
portal lobule | 1.61e-14 | 1 |
hepatic acinus | 1.61e-14 | 1 |
extraembryonic membrane | 5.37e-09 | 14 |
membranous layer | 5.37e-09 | 14 |
amnion | 1.99e-08 | 7 |
gingiva | 1.31e-07 | 8 |
somatic layer of lateral plate mesoderm | 1.76e-07 | 8 |
organ component layer | 6.69e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 2.29e-11 | 5 |
myotonic disease | 2.29e-11 | 5 |
muscle tissue disease | 2.29e-11 | 5 |
myopathy | 2.29e-11 | 5 |
muscular disease | 2.29e-11 | 5 |
myotonic dystrophy | 2.29e-11 | 5 |