FFCP PHASE1:Hg19::chr3:47620389..47620409,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:47620389..47620409,-
|short_description=p3@CSPG5
|description=CAGE_peak_3_at_CSPG5_5end
|association_with_transcript=-30bp_to_NM_001206943,NM_001206944,NM_...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10675 | |EntrezGene=10675 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=2467 | |HGNC=2467 | ||
|TSSclassifier=strong | |||
|UniProt=O95196 | |UniProt=O95196 | ||
|association_with_transcript=-30bp_to_NM_001206943,NM_001206944,NM_006574,uc003cro.3,uc003crp.3_5end | |||
|cluster_id=chr3:47620389..47620409,- | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_3_at_CSPG5_5end | |||
|id=chr3:47620389..47620409,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;1.25e-09;2 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.66e-09;82!UBERON:0003056;6.54e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002619;3.06e-57;22!UBERON:0001869;4.21e-55;32!UBERON:0001893;7.28e-54;34!UBERON:0002791;7.53e-52;32!UBERON:0003528;9.40e-52;34!UBERON:0002020;9.40e-52;34!UBERON:0000956;3.94e-50;25!UBERON:0000203;3.94e-50;25!UBERON:0001950;1.29e-49;20!UBERON:0002780;1.00e-45;41!UBERON:0001890;1.00e-45;41!UBERON:0000073;5.95e-41;53!UBERON:0002616;5.95e-41;53!UBERON:0001017;1.26e-31;75!UBERON:0000955;8.10e-31;68!UBERON:0001016;8.90e-26;83!UBERON:0000200;8.64e-25;6!UBERON:0001871;2.10e-15;6!UBERON:0000349;3.04e-14;5!UBERON:0002021;3.61e-14;5!UBERON:0001870;1.55e-13;3!UBERON:0007023;3.07e-12;114!UBERON:0002420;6.36e-12;9!UBERON:0007245;6.36e-12;9!UBERON:0010009;6.36e-12;9!UBERON:0010011;6.36e-12;9!UBERON:0000454;6.36e-12;9!UBERON:0000125;9.10e-12;9!UBERON:0002308;9.10e-12;9!UBERON:0004732;3.51e-11;13!UBERON:0000369;1.16e-10;4!UBERON:0002435;1.16e-10;4!UBERON:0000204;1.16e-10;4!UBERON:0011216;1.41e-10;132!UBERON:0009663;3.62e-10;7!UBERON:0005162;1.12e-09;2!UBERON:0000122;1.12e-09;2!UBERON:0001954;1.25e-09;2!UBERON:0003022;1.25e-09;2!UBERON:0002421;1.25e-09;2!UBERON:0002600;1.25e-09;2!UBERON:0002702;2.44e-09;2!UBERON:0002771;4.70e-09;2!UBERON:0001872;7.20e-09;5!UBERON:0004733;1.84e-08;12!UBERON:0002028;1.84e-08;12!UBERON:0002680;1.34e-07;9!UBERON:0001895;1.34e-07;9!UBERON:0010314;1.57e-07;132!UBERON:0005383;7.68e-07;3!UBERON:0005382;7.68e-07;3 | |||
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| ||
|short_description=p3@CSPG5 | |||
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Latest revision as of 12:44, 18 September 2015
Short description: | p3@CSPG5 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CSPG5_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | -30bp_to_NM_001206943, NM_001206944, NM_006574, uc003cro.3, uc003crp.3_5end |
EntrezGene: | CSPG5 |
HGNC: | 2467 |
UniProt: | O95196 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data