FFCP PHASE1:Hg19::chr3:35683620..35683628,+: Difference between revisions
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|id=chr3:35683620..35683628,+
|short_description=p49@ARPP21
|description=CAGE_peak_49_at_ARPP21_5end
|association_with_transcript=-28bp_to_ENST00000187397_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10777 | |EntrezGene=10777 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16968 | |HGNC=16968 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UBL0 | |UniProt=Q9UBL0 | ||
|association_with_transcript=-28bp_to_ENST00000187397_5end | |||
|cluster_id=chr3:35683620..35683628,+ | |||
|coexpression_cluster_id=C1213 | |||
|description=CAGE_peak_49_at_ARPP21_5end | |||
|id=chr3:35683620..35683628,+ | |||
|ontology_enrichment_celltype=CL:0000784!2.17e-31!3;CL:0000451!5.48e-09!10 | |||
|ontology_enrichment_celltype_v019=CL:0000784;2.51e-53;3!CL:0000817;2.21e-40;1!CL:0000451;1.95e-15;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,2.87e-53,3;CL:0000451,2.02e-15,10;CL:0000817,2.09e-14,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000200!3.17e-15!6;UBERON:0002771!5.05e-14!3;UBERON:0004177!1.29e-13!7;UBERON:0001871!1.07e-11!7;UBERON:0001950!1.21e-11!20;UBERON:0005418!1.78e-11!1;UBERON:0001389!1.78e-11!1;UBERON:0000026!1.78e-11!1;UBERON:0008784!1.78e-11!1;UBERON:0006058!1.78e-11!1;UBERON:0003663!1.78e-11!1;UBERON:0001383!1.78e-11!1;UBERON:0004256!1.78e-11!1;UBERON:0002529!1.78e-11!1;UBERON:0004708!1.78e-11!1;UBERON:0002101!1.78e-11!1;UBERON:0004709!1.78e-11!1;UBERON:0003661!1.78e-11!1;UBERON:0002471!1.78e-11!1;UBERON:0004357!1.78e-11!1;UBERON:0009872!1.78e-11!1;UBERON:0004347!1.78e-11!1;UBERON:0005420!1.78e-11!1;UBERON:0005732!1.78e-11!1;UBERON:0006057!1.78e-11!1;UBERON:0000978!1.78e-11!1;UBERON:0002103!1.78e-11!1;UBERON:0001665!1.78e-11!1;UBERON:0003823!1.78e-11!1;UBERON:0000154!1.78e-11!1;UBERON:0005733!1.78e-11!1;UBERON:0005730!1.78e-11!1;UBERON:0002902!2.42e-11!1;UBERON:0009899!2.42e-11!1;UBERON:0002370!2.42e-11!4;UBERON:0005058!2.42e-11!4;UBERON:0009113!2.42e-11!4;UBERON:0003295!2.42e-11!4;UBERON:0005562!2.42e-11!4;UBERON:0002581!4.91e-11!1;UBERON:0002619!1.27e-10!22;UBERON:0000956!2.21e-09!25;UBERON:0000203!2.21e-09!25;UBERON:0001017!2.69e-08!82;UBERON:0000955!6.62e-08!69;UBERON:0006238!6.62e-08!69;UBERON:0005743!7.26e-08!86;UBERON:0003351!7.57e-08!6;UBERON:0001049!1.31e-07!57;UBERON:0005068!1.31e-07!57;UBERON:0006241!1.31e-07!57;UBERON:0007135!1.31e-07!57;UBERON:0001869!2.31e-07!32;UBERON:0002616!2.48e-07!59;UBERON:0002791!3.84e-07!33;UBERON:0000073!5.04e-07!94;UBERON:0001016!5.04e-07!94;UBERON:0002020!6.21e-07!34;UBERON:0003528!6.21e-07!34;UBERON:0001893!6.21e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;2.86e-79;2!UBERON:0005058;2.86e-79;2!UBERON:0009113;2.86e-79;2!UBERON:0004177;1.57e-32;5!UBERON:0005057;1.57e-32;5!UBERON:0000077;6.92e-07;27!UBERON:0002405;6.92e-07;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.81e-40,4;UBERON:0005058,1.81e-40,4;UBERON:0009113,1.81e-40,4;UBERON:0003295,1.81e-40,4;UBERON:0005562,1.81e-40,4;UBERON:0003351,2.08e-27,6;UBERON:0004177,1.14e-23,7;UBERON:0005057,1.14e-23,7;UBERON:0000974,6.39e-17,10;UBERON:0003408,6.39e-17,10;UBERON:0001042,6.39e-17,10;UBERON:0009145,6.39e-17,10;UBERON:0006562,1.74e-15,11;UBERON:0009722,1.74e-15,11;UBERON:0007690,1.74e-15,11;UBERON:0008814,7.10e-10,18;UBERON:0001557,2.08e-09,19 | |||
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|short_description=p49@ARPP21 | |||
}} | }} |
Latest revision as of 01:14, 18 September 2015
Short description: | p49@ARPP21 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_49_at_ARPP21_5end |
Coexpression cluster: | C1213_thymus_Dendritic_CD4_non_chronic_vein_CD133 |
Association with transcript: | -28bp_to_ENST00000187397_5end |
EntrezGene: | ARPP21 |
HGNC: | 16968 |
UniProt: | Q9UBL0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 2.87e-53 | 3 |
dendritic cell | 2.02e-15 | 10 |
precursor B cell | 2.09e-14 | 3 |
Ontology term | p-value | n |
---|---|---|
thymus | 1.81e-40 | 4 |
hemolymphoid system gland | 1.81e-40 | 4 |
thymic region | 1.81e-40 | 4 |
pharyngeal gland | 1.81e-40 | 4 |
thymus primordium | 1.81e-40 | 4 |
pharyngeal epithelium | 2.08e-27 | 6 |
hemopoietic organ | 1.14e-23 | 7 |
immune organ | 1.14e-23 | 7 |
neck | 6.39e-17 | 10 |
gland of gut | 6.39e-17 | 10 |
chordate pharynx | 6.39e-17 | 10 |
pharyngeal region of foregut | 6.39e-17 | 10 |
pharynx | 1.74e-15 | 11 |
entire pharyngeal arch endoderm | 1.74e-15 | 11 |
early pharyngeal endoderm | 1.74e-15 | 11 |
pharyngeal arch system | 7.10e-10 | 18 |
upper respiratory tract | 2.08e-09 | 19 |