FFCP PHASE1:Hg19::chr3:193096536..193096547,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr3:193096536..193096547,-
|short_description=p1@ATP13A5
|description=CAGE_peak_1_at_ATP13A5_5end
|association_with_transcript=-22bp_to_NM_198505,uc011bsq.1_5e...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=344905 | |EntrezGene=344905 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=31789 | |HGNC=31789 | ||
|TSSclassifier=strong | |||
|UniProt=Q4VNC0 | |UniProt=Q4VNC0 | ||
|association_with_transcript=-22bp_to_NM_198505,uc011bsq.1_5end | |||
|cluster_id=chr3:193096536..193096547,- | |||
|coexpression_cluster_id=C160 | |||
|description=CAGE_peak_1_at_ATP13A5_5end | |||
|id=chr3:193096536..193096547,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0001014;1.17e-17;2!CL:0001016;1.17e-17;2!CL:0002327;1.44e-09;4!CL:0000453;7.25e-08;5!CL:0000840;9.23e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,1.07e-17,2;CL:0001016,1.07e-17,2;CL:0002327,1.44e-09,4;CL:0000453,7.01e-08,5;CL:0000840,8.97e-07,5;CL:0001029,8.97e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0008425;5.05e-34;1!UBERON:0006298;8.34e-34;1!UBERON:0006601;2.35e-08;82 | |||
|ontology_enrichment_disease=DOID:178!1.84e-08!1;DOID:326!1.84e-08!1;DOID:3978!1.84e-08!1;DOID:3394!1.84e-08!1;DOID:5844!1.84e-08!1;DOID:0050619!2.13e-08!1;DOID:1357!2.13e-08!1 | |||
|ontology_enrichment_disease_v019=DOID:5093;1.44e-09;4!DOID:1612;1.44e-09;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,1.44e-09,4;DOID:1612,1.44e-09,4 | |||
|ontology_enrichment_uberon=UBERON:0001896!3.36e-23!3;UBERON:0005290!3.36e-23!3;UBERON:0010096!3.36e-23!3;UBERON:0007023!9.61e-15!115;UBERON:0000955!2.37e-10!69;UBERON:0006238!2.37e-10!69;UBERON:0001017!3.68e-10!82;UBERON:0000033!4.05e-10!123;UBERON:0005743!1.34e-09!86;UBERON:0000153!1.59e-09!129;UBERON:0007811!1.59e-09!129;UBERON:0002298!5.01e-09!8;UBERON:0004121!6.82e-09!169;UBERON:0001736!8.15e-09!1;UBERON:0006298!8.15e-09!1;UBERON:0002336!1.02e-08!1;UBERON:0001018!1.02e-08!1;UBERON:0002473!1.02e-08!1;UBERON:0005340!1.02e-08!1;UBERON:0002316!1.02e-08!1;UBERON:0003544!1.02e-08!1;UBERON:0001020!1.02e-08!1;UBERON:0005970!1.02e-08!1;UBERON:0002437!1.02e-08!1;UBERON:0007029!1.18e-08!1;UBERON:0000924!1.29e-08!173;UBERON:0006601!1.29e-08!173;UBERON:0000073!1.64e-08!94;UBERON:0001016!1.64e-08!94;UBERON:0001764!2.13e-08!1;UBERON:0001825!2.13e-08!1;UBERON:0002616!2.19e-08!59;UBERON:0001049!6.39e-07!57;UBERON:0005068!6.39e-07!57;UBERON:0006241!6.39e-07!57;UBERON:0007135!6.39e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0001896;5.00e-45;3!UBERON:0005290;5.00e-45;3!UBERON:0001736;8.34e-34;1!UBERON:0002298;3.88e-23;6!UBERON:0001044;7.17e-23;6!UBERON:0003293;7.17e-23;6!UBERON:0003294;7.17e-23;6!UBERON:0010047;7.17e-23;6!UBERON:0003408;7.17e-23;6!UBERON:0000167;7.17e-23;6!UBERON:0001829;1.17e-17;2!UBERON:0004733;4.07e-12;12!UBERON:0002028;4.07e-12;12!UBERON:0004732;2.90e-11;13!UBERON:0001041;2.04e-10;14!UBERON:0002365;4.16e-10;31!UBERON:0002330;4.16e-10;31!UBERON:0001911;1.44e-09;4!UBERON:0000161;6.25e-08;19!UBERON:0000166;6.25e-08;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001896,5.00e-45,3;UBERON:0005290,5.00e-45,3;UBERON:0010096,5.00e-45,3;UBERON:0001736,9.85e-34,1;UBERON:0006298,9.85e-34,1;UBERON:0002298,3.88e-23,6;UBERON:0001044,7.58e-23,6;UBERON:0003293,7.58e-23,6;UBERON:0003294,7.58e-23,6;UBERON:0010047,7.58e-23,6;UBERON:0000167,7.58e-23,6;UBERON:0001829,1.27e-17,2;UBERON:0003408,3.71e-14,10;UBERON:0004733,4.07e-12,12;UBERON:0002028,4.07e-12,12;UBERON:0007277,4.07e-12,12;UBERON:0004732,2.90e-11,13;UBERON:0002365,2.60e-10,31;UBERON:0002330,2.60e-10,31;UBERON:0003076,6.78e-10,15;UBERON:0003057,6.78e-10,15;UBERON:0001911,1.44e-09,4;UBERON:0005333,1.44e-09,4;UBERON:0008425,1.44e-09,4;UBERON:0005311,1.44e-09,4;UBERON:0000166,5.74e-07,22 | |||
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|short_description=p1@ATP13A5 | |||
}} | }} |
Latest revision as of 11:29, 17 September 2015
Short description: | p1@ATP13A5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ATP13A5_5end |
Coexpression cluster: | C160_medulla_Hepatocyte_retina_corpus_liver_pineal_cerebral |
Association with transcript: | -22bp_to_NM_198505, uc011bsq.1_5end |
EntrezGene: | ATP13A5 |
HGNC: | 31789 |
UniProt: | Q4VNC0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 1.07e-17 | 2 |
immature CD1a-positive Langerhans cell | 1.07e-17 | 2 |
mammary gland epithelial cell | 1.44e-09 | 4 |
Langerhans cell | 7.01e-08 | 5 |
immature conventional dendritic cell | 8.97e-07 | 5 |
common dendritic progenitor | 8.97e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
medulla oblongata | 5.00e-45 | 3 |
myelencephalon | 5.00e-45 | 3 |
future myelencephalon | 5.00e-45 | 3 |
submandibular gland | 9.85e-34 | 1 |
submandibular gland primordium | 9.85e-34 | 1 |
brainstem | 3.88e-23 | 6 |
saliva-secreting gland | 7.58e-23 | 6 |
gland of oral region | 7.58e-23 | 6 |
gland of foregut | 7.58e-23 | 6 |
oral gland | 7.58e-23 | 6 |
oral cavity | 7.58e-23 | 6 |
major salivary gland | 1.27e-17 | 2 |
gland of gut | 3.71e-14 | 10 |
segmental subdivision of hindbrain | 4.07e-12 | 12 |
hindbrain | 4.07e-12 | 12 |
presumptive hindbrain | 4.07e-12 | 12 |
segmental subdivision of nervous system | 2.90e-11 | 13 |
exocrine gland | 2.60e-10 | 31 |
exocrine system | 2.60e-10 | 31 |
posterior neural tube | 6.78e-10 | 15 |
chordal neural plate | 6.78e-10 | 15 |
mammary gland | 1.44e-09 | 4 |
mammary bud | 1.44e-09 | 4 |
mammary ridge | 1.44e-09 | 4 |
mammary placode | 1.44e-09 | 4 |
oral opening | 5.74e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.44e-09 | 4 |
breast cancer | 1.44e-09 | 4 |