FFCP PHASE1:Hg19::chr3:183967409..183967497,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr3:183967409..183967497,+
|short_description=p1@ECE2
|description=CAGE_peak_1_at_ECE2_5end
|association_with_transcript=0bp_to_ENST00000324557,ENST00000402825...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9718 | |EntrezGene=9718 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13275 | |HGNC=13275 | ||
|TSSclassifier=strong | |||
|UniProt=O60344 | |UniProt=O60344 | ||
|association_with_transcript=0bp_to_ENST00000324557,ENST00000402825,NM_014693,NM_032331,uc003fnh.3,uc003fni.3_5end | |||
|cluster_id=chr3:183967409..183967497,+ | |||
|description=CAGE_peak_1_at_ECE2_5end | |||
|id=chr3:183967409..183967497,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.21e-30!254;CL:0000012!7.19e-28!682;CL:0000548!7.42e-28!679;CL:0000004!7.42e-28!679;CL:0000255!7.42e-28!679;CL:0000003!5.62e-17!722;CL:0000063!4.51e-16!578;CL:0002321!1.00e-14!248;CL:0000220!2.28e-14!246;CL:0000144!2.49e-12!625;CL:0000223!1.45e-10!59;CL:0002076!7.31e-09!43;CL:0002371!1.93e-07!591;CL:0000076!7.48e-07!62 | |||
|ontology_enrichment_celltype_v019=CL:0002076;4.68e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.69e-31,253;CL:0002321,1.68e-14,250;CL:0000223,7.49e-11,58;CL:0002076,3.55e-09,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!2.75e-28!235;DOID:14566!4.97e-27!239;DOID:305!6.69e-20!106;DOID:0050687!3.47e-17!143;DOID:0050686!2.04e-15!137;DOID:2531!6.11e-11!51;DOID:0060083!6.11e-11!51;DOID:1240!1.26e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:2531;6.77e-07;51!DOID:0060083;6.77e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:162,2.32e-28,235;DOID:14566,4.21e-27,239;DOID:305,6.40e-20,106;DOID:0050687,3.02e-17,143;DOID:0050686,1.98e-15,137;DOID:2531,5.97e-11,51;DOID:0060083,5.97e-11,51;DOID:1240,1.24e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0003104!1.41e-10!238;UBERON:0009142!1.41e-10!238;UBERON:0004119!1.67e-08!169;UBERON:0000925!1.67e-08!169;UBERON:0006595!1.67e-08!169;UBERON:0001048!1.73e-08!168;UBERON:0001041!2.06e-08!98;UBERON:0002100!2.77e-08!216;UBERON:0000072!8.83e-08!46;UBERON:0008947!8.93e-08!38;UBERON:0003258!8.93e-08!38;UBERON:0000077!2.46e-07!130;UBERON:0001004!3.71e-07!72;UBERON:0001737!4.25e-07!9;UBERON:0000065!4.73e-07!53;UBERON:0009569!5.06e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0000072;2.36e-08;37!UBERON:0001737;4.20e-07;9!UBERON:0001557;4.20e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,1.64e-10,199;UBERON:0001041,7.23e-08,87;UBERON:0008947,1.01e-07,38;UBERON:0003258,1.01e-07,38;UBERON:0004119,1.62e-07,160;UBERON:0000925,1.62e-07,160;UBERON:0006595,1.62e-07,160;UBERON:0000072,2.25e-07,47;UBERON:0001048,2.44e-07,160;UBERON:0001737,4.19e-07,9;UBERON:0009569,4.48e-07,112;UBERON:0000490,8.62e-07,148 | |||
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| ||
|short_description=p1@ECE2 | |||
}} | }} |
Latest revision as of 01:33, 17 September 2015
Short description: | p1@ECE2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ECE2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000324557, ENST00000402825, NM_014693, NM_032331, uc003fnh.3, uc003fni.3_5end |
EntrezGene: | ECE2 |
HGNC: | 13275 |
UniProt: | O60344 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.69e-31 | 253 |
embryonic cell | 1.68e-14 | 250 |
endodermal cell | 7.49e-11 | 58 |
endo-epithelial cell | 3.55e-09 | 42 |
Ontology term | p-value | n |
---|---|---|
trunk | 1.64e-10 | 199 |
foregut | 7.23e-08 | 87 |
respiratory primordium | 1.01e-07 | 38 |
endoderm of foregut | 1.01e-07 | 38 |
endoderm-derived structure | 1.62e-07 | 160 |
endoderm | 1.62e-07 | 160 |
presumptive endoderm | 1.62e-07 | 160 |
segment of respiratory tract | 2.25e-07 | 47 |
primordium | 2.44e-07 | 160 |
larynx | 4.19e-07 | 9 |
subdivision of trunk | 4.48e-07 | 112 |
unilaminar epithelium | 8.62e-07 | 148 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.32e-28 | 235 |
disease of cellular proliferation | 4.21e-27 | 239 |
carcinoma | 6.40e-20 | 106 |
cell type cancer | 3.02e-17 | 143 |
organ system cancer | 1.98e-15 | 137 |
hematologic cancer | 5.97e-11 | 51 |
immune system cancer | 5.97e-11 | 51 |
leukemia | 1.24e-07 | 39 |