FFCP PHASE1:Hg19::chr3:170150640..170150647,+: Difference between revisions
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|id=chr3:170150640..170150647,+
|short_description=p@chr3:170150640..170150647,+
|description=CAGE_peak_at_chr3:170150640..170150647,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr3:170150640..170150647,+ | |||
|description=CAGE_peak_at_chr3:170150640..170150647,+ | |||
|id=chr3:170150640..170150647,+ | |||
|ontology_enrichment_celltype=CL:0000188!5.25e-08!9;CL:0000222!6.36e-08!119;CL:0002582!5.21e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002582;3.56e-27;3!CL:0002599;5.16e-21;1!CL:1000487;1.92e-11;2!CL:0002622;6.78e-08;3!CL:0002334;1.57e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002582,5.31e-27,3;CL:0002599,2.82e-21,1;CL:1000487,2.02e-11,2;CL:0002622,7.26e-08,3;CL:0002334,1.73e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0005425;5.16e-21;1!UBERON:0006241;4.68e-08;3!UBERON:0003057;4.68e-08;3!UBERON:0003056;6.78e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003075!1.55e-11!86;UBERON:0007284!1.55e-11!86;UBERON:0001049!5.12e-11!57;UBERON:0005068!5.12e-11!57;UBERON:0006241!5.12e-11!57;UBERON:0007135!5.12e-11!57;UBERON:0002346!1.19e-10!90;UBERON:0002616!3.61e-10!59;UBERON:0003056!6.84e-09!61;UBERON:0000073!9.52e-09!94;UBERON:0001016!9.52e-09!94;UBERON:0000955!2.23e-08!69;UBERON:0006238!2.23e-08!69;UBERON:0005743!6.22e-08!86;UBERON:0003080!7.74e-08!42;UBERON:0001017!8.92e-08!82;UBERON:0000119!2.01e-07!312;UBERON:0000483!3.69e-07!309;UBERON:0002780!5.59e-07!41;UBERON:0001890!5.59e-07!41;UBERON:0006240!5.59e-07!41;UBERON:0002298!6.95e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;5.16e-21;1!UBERON:0001785;5.16e-21;1!UBERON:0002464;5.16e-21;1!UBERON:0004904;5.16e-21;1!UBERON:0001021;5.16e-21;1!UBERON:0003714;3.34e-11;2!UBERON:0005162;3.34e-11;2!UBERON:0000122;3.34e-11;2!UBERON:0002367;3.20e-08;11!UBERON:0010147;3.20e-08;11!UBERON:0002240;4.68e-08;3!UBERON:0005174;4.68e-08;3!UBERON:0001137;4.68e-08;3!UBERON:0001043;6.78e-08;3!UBERON:0003937;1.31e-07;12!UBERON:0005399;1.31e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,3.45e-21,1;UBERON:0001785,3.45e-21,1;UBERON:0002464,3.45e-21,1;UBERON:0004904,3.45e-21,1;UBERON:0001021,3.45e-21,1;UBERON:0003902,3.45e-21,1;UBERON:0005425,3.45e-21,1;UBERON:0003714,2.73e-11,2;UBERON:0005162,2.73e-11,2;UBERON:0000122,2.73e-11,2;UBERON:0002367,3.37e-08,11;UBERON:0010147,3.37e-08,11;UBERON:0009846,3.37e-08,11;UBERON:0003353,3.37e-08,11;UBERON:0004902,3.37e-08,11;UBERON:0003820,3.37e-08,11;UBERON:0009847,3.37e-08,11;UBERON:0002240,4.52e-08,3;UBERON:0005174,4.52e-08,3;UBERON:0001137,4.52e-08,3;UBERON:0001043,5.54e-08,3;UBERON:0009143,5.54e-08,3;UBERON:0003937,1.37e-07,12;UBERON:0005399,1.37e-07,12 | |||
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| ||
|short_description=p@chr3:170150640..170150647,+ | |||
}} | }} |
Latest revision as of 18:10, 29 July 2015
Short description: | p@chr3:170150640..170150647, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:170150640..170150647, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
visceral preadipocyte | 5.31e-27 | 3 |
smooth muscle cell of the esophagus | 2.82e-21 | 1 |
smooth muscle cell of prostate | 2.02e-11 | 2 |
prostate stromal cell | 7.26e-08 | 3 |
preadipocyte | 1.73e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 3.45e-21 | 1 |
cranial nerve | 3.45e-21 | 1 |
nerve trunk | 3.45e-21 | 1 |
nerve connecting eye with brain | 3.45e-21 | 1 |
nerve | 3.45e-21 | 1 |
retinal neural layer | 3.45e-21 | 1 |
presumptive neural retina | 3.45e-21 | 1 |
neural tissue | 2.73e-11 | 2 |
multi cell component structure | 2.73e-11 | 2 |
neuron projection bundle | 2.73e-11 | 2 |
prostate gland | 3.37e-08 | 11 |
male accessory sex gland | 3.37e-08 | 11 |
embryonic cloacal epithelium | 3.37e-08 | 11 |
epithelium of hindgut | 3.37e-08 | 11 |
urogenital sinus epithelium | 3.37e-08 | 11 |
prostate bud | 3.37e-08 | 11 |
prostate field | 3.37e-08 | 11 |
spinal cord | 4.52e-08 | 3 |
dorsal region element | 4.52e-08 | 3 |
dorsum | 4.52e-08 | 3 |
esophagus | 5.54e-08 | 3 |
esophageal region | 5.54e-08 | 3 |
sex gland | 1.37e-07 | 12 |
male reproductive gland | 1.37e-07 | 12 |