FFCP PHASE1:Hg19::chr3:170138985..170138998,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:170138985..170138998,+
|short_description=p7@CLDN11
|description=CAGE_peak_7_at_CLDN11_5end
|association_with_transcript=-7bp_to_ENST00000489485_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5010 | |EntrezGene=5010 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8514 | |HGNC=8514 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-7bp_to_ENST00000489485_5end | |||
|cluster_id=chr3:170138985..170138998,+ | |||
|coexpression_cluster_id=C2731 | |||
|description=CAGE_peak_7_at_CLDN11_5end | |||
|id=chr3:170138985..170138998,+ | |||
|ontology_enrichment_celltype=CL:0000222!4.74e-16!119;CL:0002139!1.74e-14!24;CL:0000115!6.23e-14!35;CL:0000183!4.54e-11!59;CL:0002078!1.79e-10!44;CL:0000055!2.63e-10!180;CL:0000071!1.10e-09!18;CL:0002546!1.10e-09!18;CL:0000213!1.61e-09!57;CL:0000215!1.61e-09!57;CL:0000057!2.19e-09!75;CL:0000680!5.21e-09!57;CL:0000056!5.21e-09!57;CL:0000355!5.21e-09!57;CL:0000187!7.29e-09!54;CL:0000192!1.75e-07!42;CL:0000514!1.75e-07!42;CL:0000393!2.41e-07!60;CL:0000211!2.41e-07!60 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.74e-26;24!CL:0000115;4.73e-21;36!CL:0000071;3.81e-17;18!CL:0002078;8.47e-14;45!CL:0000213;1.79e-12;58!CL:0000215;1.79e-12;58!CL:0002138;1.91e-11;6!CL:1000413;8.07e-08;9!CL:0002622;6.10e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.41e-26,24;CL:0000115,1.65e-25,36;CL:0002078,1.70e-20,45;CL:0000213,1.48e-18,58;CL:0000215,1.48e-18,58;CL:0000071,3.75e-17,18;CL:0002546,3.75e-17,18;CL:0000222,9.60e-14,121;CL:0005020,1.49e-11,6;CL:0002138,1.49e-11,6;CL:0005022,1.49e-11,6;CL:1000413,7.72e-08,9;CL:0002622,5.78e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002546;3.81e-17;18!CL:0005022;1.91e-11;6 | |||
|ontology_enrichment_disease=DOID:2394!3.74e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;2.22e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.48e-10,14 | |||
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|ontology_enrichment_uberon_v019=UBERON:0004638;3.81e-17;18!UBERON:0001986;3.81e-17;18!UBERON:0004852;3.81e-17;18!UBERON:0000487;1.53e-15;22!UBERON:0006914;5.86e-15;25!UBERON:0001473;3.78e-11;8!UBERON:0004536;3.78e-11;8!UBERON:0006558;3.78e-11;8!UBERON:0000490;1.05e-10;33!UBERON:0002049;1.12e-09;75!UBERON:0007798;1.12e-09;75!UBERON:0000055;6.38e-09;65!UBERON:0002465;1.23e-08;10!UBERON:0003915;8.07e-08;9!UBERON:0004700;8.07e-08;9!UBERON:0001917;8.07e-08;9!UBERON:0007500;1.99e-07;56!UBERON:0001981;1.99e-07;56!UBERON:0004537;1.99e-07;56!UBERON:0004535;7.76e-07;109 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,1.41e-20,78;UBERON:0007798,1.41e-20,78;UBERON:0004535,2.40e-19,109;UBERON:0001009,1.76e-18,112;UBERON:0004638,3.75e-17,18;UBERON:0001986,3.75e-17,18;UBERON:0004852,3.75e-17,18;UBERON:0000055,3.58e-16,68;UBERON:0000487,1.56e-15,22;UBERON:0006914,5.25e-15,25;UBERON:0004872,8.46e-13,83;UBERON:0000119,1.12e-12,309;UBERON:0004111,1.49e-12,240;UBERON:0001473,3.47e-11,8;UBERON:0004536,3.47e-11,8;UBERON:0006558,3.47e-11,8;UBERON:0000483,4.13e-11,306;UBERON:0007500,2.95e-10,59;UBERON:0001981,2.95e-10,59;UBERON:0004537,2.95e-10,59;UBERON:0006965,2.95e-10,59;UBERON:0003914,3.09e-09,117;UBERON:0000025,3.63e-09,192;UBERON:0002465,1.15e-08,10;UBERON:0003915,7.72e-08,9;UBERON:0004700,7.72e-08,9;UBERON:0001917,7.72e-08,9;UBERON:0003076,2.21e-07,15;UBERON:0003057,2.21e-07,15;UBERON:0000490,4.37e-07,148 | |||
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| ||
|short_description=p7@CLDN11 | |||
}} | }} |
Latest revision as of 16:17, 16 September 2015
Short description: | p7@CLDN11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_CLDN11_5end |
Coexpression cluster: | C2731_optic_Endothelial_small_corpus_Prostate_medulla_Pericytes |
Association with transcript: | -7bp_to_ENST00000489485_5end |
EntrezGene: | CLDN11 |
HGNC: | 8514 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.41e-26 | 24 |
endothelial cell | 1.65e-25 | 36 |
meso-epithelial cell | 1.70e-20 | 45 |
lining cell | 1.48e-18 | 58 |
barrier cell | 1.48e-18 | 58 |
blood vessel endothelial cell | 3.75e-17 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.75e-17 | 18 |
mesodermal cell | 9.60e-14 | 121 |
lymphangioblast | 1.49e-11 | 6 |
endothelial cell of lymphatic vessel | 1.49e-11 | 6 |
vascular lymphangioblast | 1.49e-11 | 6 |
endothelial cell of artery | 7.72e-08 | 9 |
prostate stromal cell | 5.78e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
vasculature | 1.41e-20 | 78 |
vascular system | 1.41e-20 | 78 |
cardiovascular system | 2.40e-19 | 109 |
circulatory system | 1.76e-18 | 112 |
blood vessel endothelium | 3.75e-17 | 18 |
endothelium | 3.75e-17 | 18 |
cardiovascular system endothelium | 3.75e-17 | 18 |
vessel | 3.58e-16 | 68 |
simple squamous epithelium | 1.56e-15 | 22 |
squamous epithelium | 5.25e-15 | 25 |
splanchnic layer of lateral plate mesoderm | 8.46e-13 | 83 |
cell layer | 1.12e-12 | 309 |
anatomical conduit | 1.49e-12 | 240 |
lymphatic vessel | 3.47e-11 | 8 |
lymph vasculature | 3.47e-11 | 8 |
lymphatic part of lymphoid system | 3.47e-11 | 8 |
epithelium | 4.13e-11 | 306 |
epithelial tube open at both ends | 2.95e-10 | 59 |
blood vessel | 2.95e-10 | 59 |
blood vasculature | 2.95e-10 | 59 |
vascular cord | 2.95e-10 | 59 |
epithelial tube | 3.09e-09 | 117 |
tube | 3.63e-09 | 192 |
lymphoid system | 1.15e-08 | 10 |
endothelial tube | 7.72e-08 | 9 |
arterial system endothelium | 7.72e-08 | 9 |
endothelium of artery | 7.72e-08 | 9 |
posterior neural tube | 2.21e-07 | 15 |
chordal neural plate | 2.21e-07 | 15 |
unilaminar epithelium | 4.37e-07 | 148 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.48e-10 | 14 |