FFCP PHASE1:Hg19::chr3:168991226..168991244,-: Difference between revisions
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|id=chr3:168991226..168991244,-
|short_description=p@chr3:168991226..168991244,-
|description=CAGE_peak_at_chr3:168991226..168991244,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr3:168991226..168991244,- | |||
|coexpression_cluster_id=C1339 | |||
|description=CAGE_peak_at_chr3:168991226..168991244,- | |||
|id=chr3:168991226..168991244,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002563;2.69e-10;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.62e-10,4;CL:0000223,5.27e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0009497;2.95e-11;13!UBERON:0001045;1.89e-10;1!UBERON:0006242;3.96e-10;1!UBERON:0003104;9.33e-10;31!UBERON:0004161;6.09e-08;11 | |||
|ontology_enrichment_disease=DOID:299!2.69e-07!25 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.14e-19!35;UBERON:0000160!4.52e-18!27;UBERON:0000059!8.38e-18!11;UBERON:0001155!1.60e-15!9;UBERON:0004907!1.68e-10!5;UBERON:0004921!1.19e-09!129;UBERON:0004185!1.19e-09!129;UBERON:0001007!1.95e-08!155;UBERON:0001555!1.95e-08!155;UBERON:0007026!1.95e-08!155;UBERON:0004119!2.06e-07!169;UBERON:0000925!2.06e-07!169;UBERON:0006595!2.06e-07!169;UBERON:0001154!7.60e-07!1;UBERON:0001153!7.60e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;1.96e-49;17!UBERON:0005409;2.38e-46;22!UBERON:0000059;1.12e-29;11!UBERON:0004921;1.14e-26;33!UBERON:0001155;1.01e-25;9!UBERON:0002108;4.15e-17;4!UBERON:0004907;6.78e-17;5!UBERON:0001154;1.89e-10;1!UBERON:0001153;1.89e-10;1!UBERON:0009854;1.89e-10;1!UBERON:0001242;2.69e-10;4!UBERON:0001262;2.69e-10;4!UBERON:0004786;2.69e-10;4!UBERON:0004808;2.69e-10;4!UBERON:0001277;2.69e-10;4!UBERON:0001052;5.33e-10;4!UBERON:0001007;9.20e-10;81!UBERON:0001555;1.10e-09;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.77e-49,17;UBERON:0005409,7.47e-41,25;UBERON:0000059,9.86e-30,11;UBERON:0001155,9.85e-26,9;UBERON:0002108,4.26e-17,4;UBERON:0004921,5.28e-17,118;UBERON:0004907,5.92e-17,5;UBERON:0001007,2.92e-15,145;UBERON:0001555,2.92e-15,145;UBERON:0007026,2.92e-15,145;UBERON:0004119,1.41e-13,160;UBERON:0000925,1.41e-13,160;UBERON:0006595,1.41e-13,160;UBERON:0001154,1.89e-10,1;UBERON:0001153,1.89e-10,1;UBERON:0001045,1.89e-10,1;UBERON:0001242,2.62e-10,4;UBERON:0001262,2.62e-10,4;UBERON:0004786,2.62e-10,4;UBERON:0004808,2.62e-10,4;UBERON:0001277,2.62e-10,4;UBERON:0001052,4.76e-10,4;UBERON:0011216,8.00e-09,223;UBERON:0001046,6.92e-08,19;UBERON:0003929,1.60e-07,54 | |||
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|short_description=p@chr3:168991226..168991244,- | |||
}} | }} |
Latest revision as of 18:02, 29 July 2015
Short description: | p@chr3:168991226..168991244, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:168991226..168991244, - |
Coexpression cluster: | C1339_small_colon_signet_trachea_gall_adenocarcinoma_Renal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.62e-10 | 4 |
endodermal cell | 5.27e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.77e-49 | 17 |
gastrointestinal system | 7.47e-41 | 25 |
large intestine | 9.86e-30 | 11 |
colon | 9.85e-26 | 9 |
small intestine | 4.26e-17 | 4 |
subdivision of digestive tract | 5.28e-17 | 118 |
lower digestive tract | 5.92e-17 | 5 |
digestive system | 2.92e-15 | 145 |
digestive tract | 2.92e-15 | 145 |
primitive gut | 2.92e-15 | 145 |
endoderm-derived structure | 1.41e-13 | 160 |
endoderm | 1.41e-13 | 160 |
presumptive endoderm | 1.41e-13 | 160 |
vermiform appendix | 1.89e-10 | 1 |
caecum | 1.89e-10 | 1 |
midgut | 1.89e-10 | 1 |
intestinal mucosa | 2.62e-10 | 4 |
wall of intestine | 2.62e-10 | 4 |
gastrointestinal system mucosa | 2.62e-10 | 4 |
gastrointestinal system epithelium | 2.62e-10 | 4 |
intestinal epithelium | 2.62e-10 | 4 |
rectum | 4.76e-10 | 4 |
organ system subdivision | 8.00e-09 | 223 |
hindgut | 6.92e-08 | 19 |
gut epithelium | 1.60e-07 | 54 |