FFCP PHASE1:Mm9::chr13:21826924..21826939,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=100041230,319155,319156,319157,319158,319159,319160,319161,320332,326619,326620,69386,97122 | |EntrezGene=100041230,319155,319156,319157,319158,319159,319160,319161,320332,326619,326620,69386,97122 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=649 | |MCL_coexpression_id=649 | ||
|TSSclassifier=NA | |||
|UniProt=P62806 | |UniProt=P62806 | ||
|association_with_transcript=21bp_to_ENSMUST00000087714_5end | |association_with_transcript=21bp_to_ENSMUST00000087714_5end | ||
|cluster_id=chr13:21826924..21826939,+ | |||
|description=CAGE_peak_8_at_Hist1h4c_5end,CAGE_peak_8_at_Hist1h4d_5end,CAGE_peak_8_at_Hist1h4f_5end,CAGE_peak_8_at_Hist1h4h_5end,CAGE_peak_8_at_Hist1h4i_5end,CAGE_peak_8_at_Hist1h4j_5end,CAGE_peak_8_at_Hist1h4k_5end,CAGE_peak_8_at_Hist1h4m_5end,CAGE_peak_8_at_Hist1h4n_5end,CAGE_peak_9_at_Hist1h4a_5end,CAGE_peak_9_at_Hist1h4b_5end,CAGE_peak_9_at_Hist2h4_5end,CAGE_peak_9_at_Hist4h4_5end | |description=CAGE_peak_8_at_Hist1h4c_5end,CAGE_peak_8_at_Hist1h4d_5end,CAGE_peak_8_at_Hist1h4f_5end,CAGE_peak_8_at_Hist1h4h_5end,CAGE_peak_8_at_Hist1h4i_5end,CAGE_peak_8_at_Hist1h4j_5end,CAGE_peak_8_at_Hist1h4k_5end,CAGE_peak_8_at_Hist1h4m_5end,CAGE_peak_8_at_Hist1h4n_5end,CAGE_peak_9_at_Hist1h4a_5end,CAGE_peak_9_at_Hist1h4b_5end,CAGE_peak_9_at_Hist2h4_5end,CAGE_peak_9_at_Hist4h4_5end | ||
|id=chr13:21826924..21826939,+ | |id=chr13:21826924..21826939,+ | ||
Latest revision as of 06:41, 27 September 2015
| Short description: | p8@Hist1h4c, p8@Hist1h4d, p8@Hist1h4f, p8@Hist1h4h, p8@Hist1h4i, p8@Hist1h4j, p8@Hist1h4k, p8@Hist1h4m, p8@Hist1h4n, p9@Hist1h4a, p9@Hist1h4b, p9@Hist2h4, p9@Hist4h4 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_8_at_Hist1h4c_5end, CAGE_peak_8_at_Hist1h4d_5end, CAGE_peak_8_at_Hist1h4f_5end, CAGE_peak_8_at_Hist1h4h_5end, CAGE_peak_8_at_Hist1h4i_5end, CAGE_peak_8_at_Hist1h4j_5end, CAGE_peak_8_at_Hist1h4k_5end, CAGE_peak_8_at_Hist1h4m_5end, CAGE_peak_8_at_Hist1h4n_5end, CAGE_peak_9_at_Hist1h4a_5end, CAGE_peak_9_at_Hist1h4b_5end, CAGE_peak_9_at_Hist2h4_5end, CAGE_peak_9_at_Hist4h4_5end |
| Coexpression cluster: | MCL_coexpression_mm9:649 |
| Association with transcript: | 21bp_to_ENSMUST00000087714_5end |
| EntrezGene: | 100041230,319155,319156,319157,319158,319159,319160,319161,320332,326619,326620,69386,97122 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| connective tissue | 8.24e-17 | 46 |
| mucosa | 4.04e-12 | 15 |
| simple columnar epithelium | 2.85e-10 | 11 |
| intestinal mucosa | 3.17e-10 | 13 |
| wall of intestine | 3.17e-10 | 13 |
| gastrointestinal system mucosa | 3.17e-10 | 13 |
| organ component layer | 7.30e-09 | 24 |
| hemolymphoid system | 7.50e-09 | 48 |
| immune system | 7.50e-09 | 48 |
| epithelium of mucosa | 9.24e-09 | 9 |
| gastrointestinal system epithelium | 9.24e-09 | 9 |
| intestinal epithelium | 9.24e-09 | 9 |
| hematopoietic system | 6.98e-08 | 45 |
| blood island | 6.98e-08 | 45 |
| unilaminar epithelium | 2.42e-07 | 66 |
| Ontology term | p-value | n |
|---|---|---|
| organ system cancer | 5.96e-08 | 6 |
