FFCP PHASE1:Hg19::chr3:149388664..149388677,-: Difference between revisions
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|id=chr3:149388664..149388677,-
|short_description=p35@WWTR1
|description=CAGE_peak_35_at_WWTR1_5end
|association_with_transcript=18bp_to_ENST00000475579_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=25937 | |EntrezGene=25937 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24042 | |HGNC=24042 | ||
|TSSclassifier=strong | |||
|UniProt=C9JQS8 | |UniProt=C9JQS8 | ||
|association_with_transcript=18bp_to_ENST00000475579_5end | |||
|cluster_id=chr3:149388664..149388677,- | |||
|coexpression_cluster_id=C235 | |||
|description=CAGE_peak_35_at_WWTR1_5end | |||
|id=chr3:149388664..149388677,- | |||
|ontology_enrichment_celltype=CL:0002541!7.48e-09!3;CL:0002563!7.97e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000182;5.89e-22;12!CL:0002231;8.99e-11;3!CL:0002563;1.70e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,5.89e-22,12;CL:0000223,1.35e-12,58;CL:0002231,8.99e-11,3;CL:0002563,1.70e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0004161;7.14e-24;11!UBERON:0009497;2.47e-20;13!CL:0000223;9.96e-10;58!UBERON:0001041;3.09e-09;30!UBERON:0003104;8.76e-09;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:7;1.32e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:7,2.98e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0000476!7.48e-09!3;UBERON:0000920!7.48e-09!3;UBERON:0002780!1.48e-07!41;UBERON:0001890!1.48e-07!41;UBERON:0006240!1.48e-07!41;UBERON:0003080!2.36e-07!42;UBERON:0005631!7.94e-07!14;UBERON:0000158!7.94e-07!14;UBERON:0001242!7.97e-07!4;UBERON:0001262!7.97e-07!4;UBERON:0004786!7.97e-07!4;UBERON:0004808!7.97e-07!4;UBERON:0001277!7.97e-07!4;UBERON:0002022!8.18e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;2.55e-15;2!UBERON:0002757;2.55e-15;2!UBERON:0010134;2.55e-15;2!UBERON:0005408;2.55e-15;2!UBERON:0001899;2.55e-15;2!UBERON:0002107;3.62e-14;19!UBERON:0006925;3.62e-14;19!UBERON:0002368;2.15e-12;33!UBERON:0000949;2.67e-11;43!UBERON:0002423;6.05e-11;25!UBERON:0002530;2.59e-09;57!UBERON:0001242;1.70e-08;4!UBERON:0001262;1.70e-08;4!UBERON:0004786;1.70e-08;4!UBERON:0004808;1.70e-08;4!UBERON:0001277;1.70e-08;4!UBERON:0002365;2.48e-08;31!UBERON:0002330;2.48e-08;31!UBERON:0003296;2.52e-08;4!UBERON:0010133;2.52e-08;4!UBERON:0002784;2.52e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,2.74e-15,2;UBERON:0002757,2.74e-15,2;UBERON:0010134,2.74e-15,2;UBERON:0005408,2.74e-15,2;UBERON:0001899,2.74e-15,2;UBERON:0002107,3.62e-14,19;UBERON:0006925,3.62e-14,19;UBERON:0008836,3.62e-14,19;UBERON:0003929,1.67e-13,54;UBERON:0002368,1.99e-13,35;UBERON:0008835,2.44e-12,22;UBERON:0003894,2.44e-12,22;UBERON:0002530,2.51e-12,59;UBERON:0009854,7.80e-12,23;UBERON:0007499,6.05e-11,25;UBERON:0009497,6.05e-11,25;UBERON:0000015,6.05e-11,25;UBERON:0002423,6.05e-11,25;UBERON:0006235,6.05e-11,25;UBERON:0004161,6.05e-11,25;UBERON:0000949,1.48e-10,45;UBERON:0009856,1.50e-10,26;UBERON:0005911,5.32e-09,82;UBERON:0002365,5.85e-09,31;UBERON:0002330,5.85e-09,31;UBERON:0001242,1.70e-08,4;UBERON:0001262,1.70e-08,4;UBERON:0004786,1.70e-08,4;UBERON:0004808,1.70e-08,4;UBERON:0001277,1.70e-08,4;UBERON:0003296,2.61e-08,4;UBERON:0010133,2.61e-08,4;UBERON:0002784,2.61e-08,4 | |||
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|short_description=p35@WWTR1 | |||
}} | }} |
Latest revision as of 22:16, 15 September 2015
Short description: | p35@WWTR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_35_at_WWTR1_5end |
Coexpression cluster: | C235_Intestinal_Prostate_liver_colon_small_kidney_pancreas |
Association with transcript: | 18bp_to_ENST00000475579_5end |
EntrezGene: | WWTR1 |
HGNC: | 24042 |
UniProt: | C9JQS8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 5.89e-22 | 12 |
endodermal cell | 1.35e-12 | 58 |
epithelial cell of prostate | 8.99e-11 | 3 |
intestinal epithelial cell | 1.70e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
pineal body | 2.74e-15 | 2 |
regional part of epithalamus | 2.74e-15 | 2 |
secretory circumventricular organ | 2.74e-15 | 2 |
circumventricular organ | 2.74e-15 | 2 |
epithalamus | 2.74e-15 | 2 |
liver | 3.62e-14 | 19 |
digestive gland | 3.62e-14 | 19 |
liver bud | 3.62e-14 | 19 |
gut epithelium | 1.67e-13 | 54 |
endocrine gland | 1.99e-13 | 35 |
hepatic diverticulum | 2.44e-12 | 22 |
liver primordium | 2.44e-12 | 22 |
gland | 2.51e-12 | 59 |
digestive tract diverticulum | 7.80e-12 | 23 |
epithelial sac | 6.05e-11 | 25 |
epithelium of foregut-midgut junction | 6.05e-11 | 25 |
anatomical boundary | 6.05e-11 | 25 |
hepatobiliary system | 6.05e-11 | 25 |
foregut-midgut junction | 6.05e-11 | 25 |
septum transversum | 6.05e-11 | 25 |
endocrine system | 1.48e-10 | 45 |
sac | 1.50e-10 | 26 |
endo-epithelium | 5.32e-09 | 82 |
exocrine gland | 5.85e-09 | 31 |
exocrine system | 5.85e-09 | 31 |
intestinal mucosa | 1.70e-08 | 4 |
wall of intestine | 1.70e-08 | 4 |
gastrointestinal system mucosa | 1.70e-08 | 4 |
gastrointestinal system epithelium | 1.70e-08 | 4 |
intestinal epithelium | 1.70e-08 | 4 |
gland of diencephalon | 2.61e-08 | 4 |
neuroendocrine gland | 2.61e-08 | 4 |
regional part of diencephalon | 2.61e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
disease of anatomical entity | 2.98e-07 | 39 |