FFCP PHASE1:Hg19::chr2:53161632..53161661,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:53161632..53161661,-
|short_description=p@chr2:53161632..53161661,-
|description=CAGE_peak_at_chr2:53161632..53161661,-
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:53161632..53161661,- | |||
|description=CAGE_peak_at_chr2:53161632..53161661,- | |||
|id=chr2:53161632..53161661,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002602;4.54e-29;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002602,2.22e-29,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;1.92e-15;1!DOID:4549;1.92e-15;1!DOID:5861;1.92e-15;1!DOID:6496;1.92e-15;1!DOID:4929;2.23e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,2.38e-15,1;DOID:4549,2.38e-15,1;DOID:5861,2.38e-15,1;DOID:6496,2.38e-15,1;DOID:4929,3.08e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0002394!3.28e-08!4;UBERON:0003928!3.28e-08!4;UBERON:0002418!5.58e-08!3;UBERON:0004755!5.58e-08!3;UBERON:0002294!3.61e-07!7;UBERON:0001173!3.61e-07!7;UBERON:0004912!3.61e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002418;1.15e-42;3!UBERON:0004755;1.15e-42;3!UBERON:0006444;4.54e-29;2!UBERON:0001995;4.54e-29;2!UBERON:0004715;4.54e-29;2!UBERON:0011135;3.04e-26;5!UBERON:0002216;3.04e-26;5!UBERON:0011134;3.04e-26;5!UBERON:0002209;3.04e-26;5!UBERON:0002213;3.04e-26;5!UBERON:0007844;3.04e-26;5!UBERON:0011138;3.04e-26;5!UBERON:0001130;3.04e-26;5!UBERON:0001066;3.04e-26;5!UBERON:0001468;3.04e-26;5!UBERON:0004905;1.14e-16;8!UBERON:0000982;1.14e-16;8!UBERON:0004770;1.14e-16;8!UBERON:0002135;8.02e-16;1!UBERON:0004913;1.92e-15;1!UBERON:0003703;1.92e-15;1!UBERON:0001174;1.92e-15;1!UBERON:0004914;1.92e-15;1!UBERON:0004765;4.81e-09;26!UBERON:0000075;1.24e-08;16!UBERON:0003127;1.44e-08;2!UBERON:0002133;1.44e-08;2!UBERON:0000341;2.23e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002418,7.00e-43,3;UBERON:0004755,7.00e-43,3;UBERON:0006444,2.22e-29,2;UBERON:0001995,2.22e-29,2;UBERON:0004715,2.22e-29,2;UBERON:0011135,1.98e-26,5;UBERON:0002216,1.98e-26,5;UBERON:0011134,1.98e-26,5;UBERON:0002209,1.98e-26,5;UBERON:0002213,1.98e-26,5;UBERON:0005856,1.98e-26,5;UBERON:0005866,1.98e-26,5;UBERON:0005863,1.98e-26,5;UBERON:0007844,1.98e-26,5;UBERON:0011138,1.98e-26,5;UBERON:0001130,1.98e-26,5;UBERON:0001066,1.98e-26,5;UBERON:0001468,1.98e-26,5;UBERON:0004905,8.71e-17,8;UBERON:0000982,8.71e-17,8;UBERON:0004770,8.71e-17,8;UBERON:0002135,8.63e-16,1;UBERON:0004913,3.66e-15,1;UBERON:0003703,3.66e-15,1;UBERON:0001174,3.66e-15,1;UBERON:0004914,3.66e-15,1;UBERON:0000075,1.09e-08,16;UBERON:0003127,1.39e-08,2;UBERON:0002133,1.50e-08,2;UBERON:0000341,1.86e-08,2 | |||
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| ||
|short_description=p@chr2:53161632..53161661,- | |||
}} | }} |
Latest revision as of 10:45, 29 July 2015
Short description: | p@chr2:53161632..53161661, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:53161632..53161661, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
annulus pulposus cell | 2.22e-29 | 2 |
Ontology term | p-value | n |
---|---|---|
cartilage tissue | 7.00e-43 | 3 |
skeletal tissue | 7.00e-43 | 3 |
annulus fibrosus | 2.22e-29 | 2 |
fibrocartilage | 2.22e-29 | 2 |
annulus fibrosus disci intervertebralis | 2.22e-29 | 2 |
intervertebral cartilage | 1.98e-26 | 5 |
symphysis | 1.98e-26 | 5 |
nonsynovial joint | 1.98e-26 | 5 |
fibrous joint | 1.98e-26 | 5 |
cartilaginous joint | 1.98e-26 | 5 |
developing mesenchymal condensation | 1.98e-26 | 5 |
pre-cartilage condensation | 1.98e-26 | 5 |
cartilaginous condensation | 1.98e-26 | 5 |
cartilage element | 1.98e-26 | 5 |
post-cranial axial skeletal system | 1.98e-26 | 5 |
vertebral column | 1.98e-26 | 5 |
intervertebral disk | 1.98e-26 | 5 |
intervertebral joint | 1.98e-26 | 5 |
articulation | 8.71e-17 | 8 |
skeletal joint | 8.71e-17 | 8 |
articular system | 8.71e-17 | 8 |
mitral valve | 8.63e-16 | 1 |
hepatopancreatic ampulla | 3.66e-15 | 1 |
extrahepatic bile duct | 3.66e-15 | 1 |
common bile duct | 3.66e-15 | 1 |
duodenal papilla | 3.66e-15 | 1 |
subdivision of skeletal system | 1.09e-08 | 16 |
open tracheal system trachea | 1.39e-08 | 2 |
atrioventricular valve | 1.50e-08 | 2 |
throat | 1.86e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 2.38e-15 | 1 |
extraosseous chondrosarcoma | 2.38e-15 | 1 |
myxoid chondrosarcoma | 2.38e-15 | 1 |
extraskeletal myxoid chondrosarcoma | 2.38e-15 | 1 |
tubular adenocarcinoma | 3.08e-08 | 2 |