FFCP PHASE1:Hg19::chr2:46607364..46607410,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:46607364..46607410,+
|short_description=p@chr2:46607364..46607410,+
|description=CAGE_peak_at_chr2:46607364..46607410,+
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:46607364..46607410,+ | |||
|coexpression_cluster_id=C2700 | |||
|description=CAGE_peak_at_chr2:46607364..46607410,+ | |||
|id=chr2:46607364..46607410,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000349;7.92e-11;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.13e-10,19;CL:0002541,7.45e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000477!2.21e-13!286;UBERON:0004111!1.90e-11!241;UBERON:0000468!1.70e-10!659;UBERON:0000062!3.77e-10!511;UBERON:0000483!4.86e-10!309;UBERON:0000467!5.37e-10!625;UBERON:0000480!7.97e-10!626;UBERON:0000119!8.03e-10!312;UBERON:0000064!2.33e-08!219;UBERON:0007023!4.84e-08!115;UBERON:0005631!1.99e-07!14;UBERON:0000158!1.99e-07!14;UBERON:0004923!2.01e-07!57;UBERON:0000025!2.35e-07!194;UBERON:0000481!7.75e-07!347;UBERON:0000475!8.39e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;4.79e-13;10!UBERON:0000158;4.79e-13;10!UBERON:0003688;9.43e-10;6!UBERON:0002358;9.43e-10;6!UBERON:0003684;9.43e-10;6!UBERON:0001178;9.43e-10;6!UBERON:0000478;1.16e-09;24!UBERON:0004457;2.49e-08;9!UBERON:0000042;2.49e-08;9!UBERON:0000305;3.05e-08;7!UBERON:0004151;6.44e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.00e-15,14;UBERON:0000158,1.00e-15,14;UBERON:0004923,5.70e-10,66;UBERON:0003688,1.31e-09,6;UBERON:0002358,1.31e-09,6;UBERON:0003684,1.31e-09,6;UBERON:0001178,1.31e-09,6;UBERON:0000478,1.52e-09,24;UBERON:0003124,1.68e-09,7;UBERON:0000305,6.77e-08,7;UBERON:0002417,1.53e-07,60;UBERON:0000916,1.53e-07,60;UBERON:0004151,7.18e-07,3;UBERON:0000920,7.45e-07,3;UBERON:0004871,8.14e-07,8;UBERON:0001280,9.36e-07,3;UBERON:0004647,9.36e-07,3;UBERON:0005171,9.36e-07,3 | |||
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| ||
|short_description=p@chr2:46607364..46607410,+ | |||
}} | }} |
Latest revision as of 10:28, 29 July 2015
Short description: | p@chr2:46607364..46607410, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:46607364..46607410, + |
Coexpression cluster: | C2700_chorionic_lung_Fibroblast_Olfactory_Renal_Endothelial_Hepatic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.13e-10 | 19 |
chorionic membrane mesenchymal stem cell | 7.45e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.00e-15 | 14 |
membranous layer | 1.00e-15 | 14 |
organ component layer | 5.70e-10 | 66 |
omentum | 1.31e-09 | 6 |
peritoneum | 1.31e-09 | 6 |
abdominal cavity | 1.31e-09 | 6 |
visceral peritoneum | 1.31e-09 | 6 |
extraembryonic structure | 1.52e-09 | 24 |
chorion | 1.68e-09 | 7 |
amnion | 6.77e-08 | 7 |
abdominal segment of trunk | 1.53e-07 | 60 |
abdomen | 1.53e-07 | 60 |
cardiac chamber | 7.18e-07 | 3 |
egg chorion | 7.45e-07 | 3 |
somatic layer of lateral plate mesoderm | 8.14e-07 | 8 |
liver parenchyma | 9.36e-07 | 3 |
liver lobule | 9.36e-07 | 3 |
hepatic duct | 9.36e-07 | 3 |