FFCP PHASE1:Mm9::chr7:107327242..107327249,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=57442 | |EntrezGene=57442 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=474 | |MCL_coexpression_id=474 | ||
|TSSclassifier=NA | |||
|UniProt=Q9WTW2 | |UniProt=Q9WTW2 | ||
|association_with_transcript=35bp_to_ENSMUST00000049333,ENSMUST00000170954_5end | |association_with_transcript=35bp_to_ENSMUST00000049333,ENSMUST00000170954_5end | ||
|cluster_id=chr7:107327242..107327249,+ | |||
|description=CAGE_peak_3_at_Kcne3_5end | |description=CAGE_peak_3_at_Kcne3_5end | ||
|id=chr7:107327242..107327249,+ | |id=chr7:107327242..107327249,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,7.94e-12,9;CL:0002251,7.94e-12,9;CL:0000066,7.27e-09,25;CL:0002250,1.10e-08,3;CL:0000682,2.93e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!4.92e-19!59;UBERON:0000160!8.54e-17!43;UBERON:0000344!4.47e-08!15;UBERON:0001007!3.38e-07!128;UBERON:0001555!3.38e-07!128;UBERON:0007026!3.38e-07!128;UBERON:0004119!3.91e-07!130;UBERON:0000925!3.91e-07!130;UBERON:0006595!3.91e-07!130 | |ontology_enrichment_uberon=UBERON:0005409!4.92e-19!59;UBERON:0000160!8.54e-17!43;UBERON:0000344!4.47e-08!15;UBERON:0001007!3.38e-07!128;UBERON:0001555!3.38e-07!128;UBERON:0007026!3.38e-07!128;UBERON:0004119!3.91e-07!130;UBERON:0000925!3.91e-07!130;UBERON:0006595!3.91e-07!130 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.82e-45,31;UBERON:0005409,1.50e-32,47;UBERON:0000344,1.91e-20,15;UBERON:0001242,1.63e-16,13;UBERON:0001262,1.63e-16,13;UBERON:0004786,1.63e-16,13;UBERON:0001007,2.52e-12,116;UBERON:0001555,2.52e-12,116;UBERON:0007026,2.52e-12,116;UBERON:0004119,5.41e-12,118;UBERON:0000925,5.41e-12,118;UBERON:0006595,5.41e-12,118;UBERON:0003350,7.94e-12,9;UBERON:0004808,7.94e-12,9;UBERON:0001277,7.94e-12,9;UBERON:0004923,9.88e-12,24;UBERON:0004921,1.76e-10,114;UBERON:0002108,8.40e-10,4;UBERON:0000485,1.78e-09,11;UBERON:0000331,3.67e-08,3;UBERON:0002116,3.67e-08,3;UBERON:0001204,3.67e-08,3;UBERON:0001168,3.67e-08,3 | |||
|phase1_expression=0,1.04692622291808,0,0.30246421130683,1.00179145989269,2.18243053485457,2.56973904655078,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,1.04479915655574,2.23989391910769,3.67054849707472,2.8711598205751,1.7230479846363,1.939241094173,4.18051522804023,3.78045194639896,3.32595765982957,0,0,0,8.95440021228951,12.1351291111699,8.98345167554424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31891590961342,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0.216491041011214,0.506719730950197,0,0.68510327831436,0,0.29688427812965,0.520455980298408,0.304465478312141,0,0.150722640552623,0,0,0.247194967734374,0.144599356919912,0,0.323533699894818,0.220841518460394,0,5.59175283654366,0,0,2.81002760729451,0.11981512450592,0.599902730993408,0.254140454146129,0,0.457500602818626,0,0,0,0,0.162241263067758,0.101839363850316,0.622034853050465,2.77995034277042,0,0.520481771850815,0,0,0.30140963567143,0.0680364991513279,0.12811372028485,0,0,0.862271971731369,0.378212160335639,0.351902248327898,0.219195732427575,0.278047249225598,0.696504333044333,0.205782136407943,0,0,0,0.284163499395593,0,0,0.540186184383045,0.23674473558521,0.590292695242212,0.308534225774757,0.232533944750408,0.268273401399619,0.233530684734339,0,0,0.0810688095458557,0.146199987425332,0.219550115291051,0,0,0,0,2.3800550999719,0.426576501070468,0.696710015581316,2.19074684247559,2.01683524623343,1.77902435075896,2.09248188723815,2.37264530772256,2.47048432086016,2.5133520880027,1.39269530428806,1.55971269695296,2.69645822596266,4.97117514711797,5.37681437786791,0.189667900953082,0,0,0,0.193952487167626,0,0.126473074248515,0,0,0,0.296452627087149,0,0,0,0,0.241177159752417,0,0.287696137450811,0.162135226775035,0,0,0,0,0.252578877947112,0,0,0.184753190166605,0.189491411770485,0,0,0,0.335012514883631,0,0,0,0,0.159454768657487,0.327726629431476,0,0.433947175744535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.584511715822624,0,0,0.567760340833074,0,0.162886959353576,1.64970122972535,1.32745138339963,0.242780636154981,0,0.188605079755898,0,0.614870295887855,1.29214146584111,1.09060118843252,0,0.316036757935816,0,0,0,0.18006109403131,0.129358683782755,0.643011105094777,0.177340233642274,0,0,0,0.23467170806371,0,0,0.16488625294148,0,0,0,0.164140899745061,1.45740418314925,0,0,0.206386867963223,0.185194527369712,0.188368457004691,0,0,0,0.139951452323658,0.138199973804424,0.954670618015114,1.10717597753397,0.406638934253697,0.86404272657441,0.209088296014469,0.655087691238533,0.269728692769641,0.330613822901344,0.26175594198403,5.83267379813068,0.621339313086926,0,0.149516546043979,0.165458490457098,0,0.129159823477731,0,0,0,0,0,0.288030006257865,0,0,0.410843828659309,0,0,0,0.120195449519969,0,0.100966449948148,0.0762068066549998,0,0.0974578807397524,0,0,0.680191150845634,0,0,0,0,0,0.183151624267265,0.214368379079066,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0.103787347584177,0,0.341467211508268,0,0.209613162627982,0.367687016900028,0.44449345560323,0.412070114477788,0.320919209591815,0.758091635291392,0.50695859978048,0.188626341386076,0.468207537349412,0.384150914429216,0.229741875822453,0,0.347652977834566,0.38581844092741,0,0.441596760403192,0.342869252385415,0.354951612318675,0.238436189947321,0.145346416632329,0.376437521661322,0.338458431566706,0.365855945745545,0.526139422875686,0,1.68342681497322,0.355905054372522,0.29551344712669,0,0.154936841185966,0.578719832943424,0,0,0.214871054048298,0.191288332068843,0,0.231867835620421 | |phase1_expression=0,1.04692622291808,0,0.30246421130683,1.00179145989269,2.18243053485457,2.56973904655078,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,1.04479915655574,2.23989391910769,3.67054849707472,2.8711598205751,1.7230479846363,1.939241094173,4.18051522804023,3.78045194639896,3.32595765982957,0,0,0,8.95440021228951,12.1351291111699,8.98345167554424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31891590961342,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0.216491041011214,0.506719730950197,0,0.68510327831436,0,0.29688427812965,0.520455980298408,0.304465478312141,0,0.150722640552623,0,0,0.247194967734374,0.144599356919912,0,0.323533699894818,0.220841518460394,0,5.59175283654366,0,0,2.81002760729451,0.11981512450592,0.599902730993408,0.254140454146129,0,0.457500602818626,0,0,0,0,0.162241263067758,0.101839363850316,0.622034853050465,2.77995034277042,0,0.520481771850815,0,0,0.30140963567143,0.0680364991513279,0.12811372028485,0,0,0.862271971731369,0.378212160335639,0.351902248327898,0.219195732427575,0.278047249225598,0.696504333044333,0.205782136407943,0,0,0,0.284163499395593,0,0,0.540186184383045,0.23674473558521,0.590292695242212,0.308534225774757,0.232533944750408,0.268273401399619,0.233530684734339,0,0,0.0810688095458557,0.146199987425332,0.219550115291051,0,0,0,0,2.3800550999719,0.426576501070468,0.696710015581316,2.19074684247559,2.01683524623343,1.77902435075896,2.09248188723815,2.37264530772256,2.47048432086016,2.5133520880027,1.39269530428806,1.55971269695296,2.69645822596266,4.97117514711797,5.37681437786791,0.189667900953082,0,0,0,0.193952487167626,0,0.126473074248515,0,0,0,0.296452627087149,0,0,0,0,0.241177159752417,0,0.287696137450811,0.162135226775035,0,0,0,0,0.252578877947112,0,0,0.184753190166605,0.189491411770485,0,0,0,0.335012514883631,0,0,0,0,0.159454768657487,0.327726629431476,0,0.433947175744535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.584511715822624,0,0,0.567760340833074,0,0.162886959353576,1.64970122972535,1.32745138339963,0.242780636154981,0,0.188605079755898,0,0.614870295887855,1.29214146584111,1.09060118843252,0,0.316036757935816,0,0,0,0.18006109403131,0.129358683782755,0.643011105094777,0.177340233642274,0,0,0,0.23467170806371,0,0,0.16488625294148,0,0,0,0.164140899745061,1.45740418314925,0,0,0.206386867963223,0.185194527369712,0.188368457004691,0,0,0,0.139951452323658,0.138199973804424,0.954670618015114,1.10717597753397,0.406638934253697,0.86404272657441,0.209088296014469,0.655087691238533,0.269728692769641,0.330613822901344,0.26175594198403,5.83267379813068,0.621339313086926,0,0.149516546043979,0.165458490457098,0,0.129159823477731,0,0,0,0,0,0.288030006257865,0,0,0.410843828659309,0,0,0,0.120195449519969,0,0.100966449948148,0.0762068066549998,0,0.0974578807397524,0,0,0.680191150845634,0,0,0,0,0,0.183151624267265,0.214368379079066,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0.103787347584177,0,0.341467211508268,0,0.209613162627982,0.367687016900028,0.44449345560323,0.412070114477788,0.320919209591815,0.758091635291392,0.50695859978048,0.188626341386076,0.468207537349412,0.384150914429216,0.229741875822453,0,0.347652977834566,0.38581844092741,0,0.441596760403192,0.342869252385415,0.354951612318675,0.238436189947321,0.145346416632329,0.376437521661322,0.338458431566706,0.365855945745545,0.526139422875686,0,1.68342681497322,0.355905054372522,0.29551344712669,0,0.154936841185966,0.578719832943424,0,0,0.214871054048298,0.191288332068843,0,0.231867835620421 | ||
|short_description=p3@Kcne3 | |short_description=p3@Kcne3 | ||
}} | }} |
Latest revision as of 14:35, 25 September 2015
Short description: | p3@Kcne3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Kcne3_5end |
Coexpression cluster: | MCL_coexpression_mm9:474 |
Association with transcript: | 35bp_to_ENSMUST00000049333, ENSMUST00000170954_5end |
EntrezGene: | Kcne3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 7.94e-12 | 9 |
epithelial cell of alimentary canal | 7.94e-12 | 9 |
epithelial cell | 7.27e-09 | 25 |
intestinal crypt stem cell | 1.10e-08 | 3 |
M cell of gut | 2.93e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 4.82e-45 | 31 |
gastrointestinal system | 1.50e-32 | 47 |
mucosa | 1.91e-20 | 15 |
intestinal mucosa | 1.63e-16 | 13 |
wall of intestine | 1.63e-16 | 13 |
gastrointestinal system mucosa | 1.63e-16 | 13 |
digestive system | 2.52e-12 | 116 |
digestive tract | 2.52e-12 | 116 |
primitive gut | 2.52e-12 | 116 |
endoderm-derived structure | 5.41e-12 | 118 |
endoderm | 5.41e-12 | 118 |
presumptive endoderm | 5.41e-12 | 118 |
epithelium of mucosa | 7.94e-12 | 9 |
gastrointestinal system epithelium | 7.94e-12 | 9 |
intestinal epithelium | 7.94e-12 | 9 |
organ component layer | 9.88e-12 | 24 |
subdivision of digestive tract | 1.76e-10 | 114 |
small intestine | 8.40e-10 | 4 |
simple columnar epithelium | 1.78e-09 | 11 |
ileal mucosa | 3.67e-08 | 3 |
ileum | 3.67e-08 | 3 |
mucosa of small intestine | 3.67e-08 | 3 |
wall of small intestine | 3.67e-08 | 3 |