FFCP PHASE1:Mm9::chrX:130646391..130646412,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=237038 | |EntrezGene=237038 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=457 | |MCL_coexpression_id=457 | ||
|TSSclassifier=NA | |||
|UniProt=Q8CIZ9 | |UniProt=Q8CIZ9 | ||
|association_with_transcript=0bp_to_ENSMUST00000033610,uc009ufm.1_5end | |association_with_transcript=0bp_to_ENSMUST00000033610,uc009ufm.1_5end | ||
|cluster_id=chrX:130646391..130646412,- | |||
|description=CAGE_peak_2_at_Nox1_5end | |description=CAGE_peak_2_at_Nox1_5end | ||
|id=chrX:130646391..130646412,- | |id=chrX:130646391..130646412,- | ||
|ontology_enrichment_celltype=CL:0002563!6.14e-09!9;CL:0002251!6.14e-09!9 | |ontology_enrichment_celltype=CL:0002563!6.14e-09!9;CL:0002251!6.14e-09!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000682,4.44e-14,3;CL:0002563,1.06e-11,9;CL:0002251,1.06e-11,9;CL:0000473,2.95e-10,7;CL:0000066,4.46e-10,25;CL:0000239,4.04e-07,6;CL:0000677,4.04e-07,6;CL:0000584,4.04e-07,6;CL:0002076,6.08e-07,15 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!4.65e-15!15;UBERON:0001242!4.18e-12!13;UBERON:0000060!4.18e-12!13;UBERON:0001262!4.18e-12!13;UBERON:0004786!4.18e-12!13;UBERON:0001007!3.05e-10!128;UBERON:0001555!3.05e-10!128;UBERON:0007026!3.05e-10!128;UBERON:0000160!5.65e-10!43;UBERON:0004119!6.30e-10!130;UBERON:0000925!6.30e-10!130;UBERON:0006595!6.30e-10!130;UBERON:0003350!6.14e-09!9;UBERON:0004808!6.14e-09!9;UBERON:0001277!6.14e-09!9;UBERON:0004921!8.08e-09!126;UBERON:0004185!8.08e-09!126;UBERON:0004923!3.41e-08!24;UBERON:0005409!1.41e-07!59;UBERON:0000485!4.65e-07!11;UBERON:0002048!5.04e-07!14;UBERON:0000117!5.04e-07!14;UBERON:0000171!5.04e-07!14;UBERON:0000170!5.04e-07!14;UBERON:0005597!5.04e-07!14;UBERON:0000118!5.04e-07!14;UBERON:0005153!6.92e-07!17 | |ontology_enrichment_uberon=UBERON:0000344!4.65e-15!15;UBERON:0001242!4.18e-12!13;UBERON:0000060!4.18e-12!13;UBERON:0001262!4.18e-12!13;UBERON:0004786!4.18e-12!13;UBERON:0001007!3.05e-10!128;UBERON:0001555!3.05e-10!128;UBERON:0007026!3.05e-10!128;UBERON:0000160!5.65e-10!43;UBERON:0004119!6.30e-10!130;UBERON:0000925!6.30e-10!130;UBERON:0006595!6.30e-10!130;UBERON:0003350!6.14e-09!9;UBERON:0004808!6.14e-09!9;UBERON:0001277!6.14e-09!9;UBERON:0004921!8.08e-09!126;UBERON:0004185!8.08e-09!126;UBERON:0004923!3.41e-08!24;UBERON:0005409!1.41e-07!59;UBERON:0000485!4.65e-07!11;UBERON:0002048!5.04e-07!14;UBERON:0000117!5.04e-07!14;UBERON:0000171!5.04e-07!14;UBERON:0000170!5.04e-07!14;UBERON:0005597!5.04e-07!14;UBERON:0000118!5.04e-07!14;UBERON:0005153!6.92e-07!17 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,9.24e-27,15;UBERON:0000160,2.37e-24,31;UBERON:0001242,7.41e-20,13;UBERON:0001262,7.41e-20,13;UBERON:0004786,7.41e-20,13;UBERON:0005409,7.77e-18,47;UBERON:0004923,3.63e-16,24;UBERON:0000331,2.87e-13,3;UBERON:0002116,2.87e-13,3;UBERON:0001204,2.87e-13,3;UBERON:0001168,2.87e-13,3;UBERON:0003350,1.06e-11,9;UBERON:0004808,1.06e-11,9;UBERON:0001277,1.06e-11,9;UBERON:0002108,4.42e-10,4;UBERON:0000485,1.53e-09,11;UBERON:0001962,1.64e-09,2;UBERON:0001961,1.64e-09,2;UBERON:0001744,1.64e-09,2;UBERON:0001007,8.58e-08,116;UBERON:0001555,8.58e-08,116;UBERON:0007026,8.58e-08,116;UBERON:0004119,1.30e-07,118;UBERON:0000925,1.30e-07,118;UBERON:0006595,1.30e-07,118 | |||
|phase1_expression=0,2.44282785347553,0.454999239389536,0,0,7.05092942029937,7.70921713965235,0,0.281577444303333,0.234064526321993,0.171217968225505,0,0,0,0,0,0,0,0,0,0,0.0992909512008853,0.783599367416806,3.67982572424835,2.52350209173887,4.59385571292016,4.30761996159075,10.7735616342945,1.33016393619462,2.01624103807945,49.6676343867883,0,0,0,2.59966457776147,0.997407872150954,1.22501613757421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,14.9113408974498,0,0,0.766371165625774,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190225626112559,0.474529061544512,0,1.50801125280162,1.79060824837036,1.75467678407208,0,3.6743468478698,3.58454291857861,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0.651859905768103,0.848725428875941,0,0.167506257441816,0,0.585400943573396,0.315270288212382,0,0.159454768657487,0,0,0.289298117163023,0,2.17562273527484,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.989820737835213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169978429993855,0.279902904647316,0.276399947608848,0,0,0,0,0,0,0,0.0826534557253359,0,8.81381818384192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0.302899349844443,0.15241361331,0,0.0974578807397524,0.192423683280659,0,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0.183843508450014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182927972872773,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0 | |phase1_expression=0,2.44282785347553,0.454999239389536,0,0,7.05092942029937,7.70921713965235,0,0.281577444303333,0.234064526321993,0.171217968225505,0,0,0,0,0,0,0,0,0,0,0.0992909512008853,0.783599367416806,3.67982572424835,2.52350209173887,4.59385571292016,4.30761996159075,10.7735616342945,1.33016393619462,2.01624103807945,49.6676343867883,0,0,0,2.59966457776147,0.997407872150954,1.22501613757421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,14.9113408974498,0,0,0.766371165625774,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190225626112559,0.474529061544512,0,1.50801125280162,1.79060824837036,1.75467678407208,0,3.6743468478698,3.58454291857861,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0.651859905768103,0.848725428875941,0,0.167506257441816,0,0.585400943573396,0.315270288212382,0,0.159454768657487,0,0,0.289298117163023,0,2.17562273527484,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.989820737835213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169978429993855,0.279902904647316,0.276399947608848,0,0,0,0,0,0,0,0.0826534557253359,0,8.81381818384192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0.302899349844443,0.15241361331,0,0.0974578807397524,0.192423683280659,0,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0.183843508450014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182927972872773,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0 | ||
|short_description=p2@Nox1 | |short_description=p2@Nox1 | ||
}} | }} |
Latest revision as of 14:07, 1 October 2015
Short description: | p2@Nox1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Nox1_5end |
Coexpression cluster: | MCL_coexpression_mm9:457 |
Association with transcript: | 0bp_to_ENSMUST00000033610, uc009ufm.1_5end |
EntrezGene: | Nox1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 4.44e-14 | 3 |
intestinal epithelial cell | 1.06e-11 | 9 |
epithelial cell of alimentary canal | 1.06e-11 | 9 |
defensive cell | 2.95e-10 | 7 |
epithelial cell | 4.46e-10 | 25 |
brush border epithelial cell | 4.04e-07 | 6 |
gut absorptive cell | 4.04e-07 | 6 |
enterocyte | 4.04e-07 | 6 |
endo-epithelial cell | 6.08e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
mucosa | 9.24e-27 | 15 |
intestine | 2.37e-24 | 31 |
intestinal mucosa | 7.41e-20 | 13 |
wall of intestine | 7.41e-20 | 13 |
gastrointestinal system mucosa | 7.41e-20 | 13 |
gastrointestinal system | 7.77e-18 | 47 |
organ component layer | 3.63e-16 | 24 |
ileal mucosa | 2.87e-13 | 3 |
ileum | 2.87e-13 | 3 |
mucosa of small intestine | 2.87e-13 | 3 |
wall of small intestine | 2.87e-13 | 3 |
epithelium of mucosa | 1.06e-11 | 9 |
gastrointestinal system epithelium | 1.06e-11 | 9 |
intestinal epithelium | 1.06e-11 | 9 |
small intestine | 4.42e-10 | 4 |
simple columnar epithelium | 1.53e-09 | 11 |
gut-associated lymphoid tissue | 1.64e-09 | 2 |
mucosa-associated lymphoid tissue | 1.64e-09 | 2 |
lymphoid tissue | 1.64e-09 | 2 |
digestive system | 8.58e-08 | 116 |
digestive tract | 8.58e-08 | 116 |
primitive gut | 8.58e-08 | 116 |
endoderm-derived structure | 1.30e-07 | 118 |
endoderm | 1.30e-07 | 118 |
presumptive endoderm | 1.30e-07 | 118 |