FFCP PHASE1:Mm9::chr12:47919483..47919504,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=87 | |MCL_coexpression_id=87 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:47919483..47919504,- | |||
|description=CAGE_peak_at_chr12:47919483..47919504,- | |description=CAGE_peak_at_chr12:47919483..47919504,- | ||
|id=chr12:47919483..47919504,- | |id=chr12:47919483..47919504,- | ||
|ontology_enrichment_celltype=CL:0000117!1.02e-15!23;CL:0000337!1.02e-15!23;CL:0000540!5.47e-14!33;CL:0000047!5.47e-14!33;CL:0000031!5.47e-14!33;CL:0000404!5.47e-14!33;CL:0000393!3.86e-10!39;CL:0000211!3.86e-10!39;CL:0000221!7.01e-10!44;CL:0000133!7.01e-10!44;CL:0002319!9.02e-10!43;CL:0000055!5.91e-07!50 | |ontology_enrichment_celltype=CL:0000117!1.02e-15!23;CL:0000337!1.02e-15!23;CL:0000540!5.47e-14!33;CL:0000047!5.47e-14!33;CL:0000031!5.47e-14!33;CL:0000404!5.47e-14!33;CL:0000393!3.86e-10!39;CL:0000211!3.86e-10!39;CL:0000221!7.01e-10!44;CL:0000133!7.01e-10!44;CL:0002319!9.02e-10!43;CL:0000055!5.91e-07!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.04e-29,23;CL:0000337,1.04e-29,23;CL:0000540,1.90e-19,33;CL:0000047,1.90e-19,33;CL:0000031,1.90e-19,33;CL:0000404,1.90e-19,33;CL:0000393,8.01e-16,39;CL:0000211,8.01e-16,39;CL:0002319,5.69e-14,43;CL:0000221,1.46e-13,44;CL:0000133,1.46e-13,44;CL:0000120,3.16e-09,3;CL:0002612,4.02e-09,3;CL:0002613,5.76e-09,3;CL:0002610,3.88e-08,3;CL:0002614,2.11e-07,3;CL:0002321,4.61e-07,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!6.40e-28!73;UBERON:0005743!6.40e-28!73;UBERON:0000073!1.65e-26!75;UBERON:0001016!1.65e-26!75;UBERON:0001049!1.23e-25!52;UBERON:0005068!1.23e-25!52;UBERON:0006241!1.23e-25!52;UBERON:0007135!1.23e-25!52;UBERON:0000033!2.04e-25!63;UBERON:0004121!4.69e-25!102;UBERON:0000924!4.69e-25!102;UBERON:0006601!4.69e-25!102;UBERON:0002346!6.17e-25!71;UBERON:0003075!6.17e-25!71;UBERON:0007284!6.17e-25!71;UBERON:0000955!1.49e-23!50;UBERON:0006238!1.49e-23!50;UBERON:0003056!6.23e-23!49;UBERON:0002616!8.25e-23!49;UBERON:0002020!7.73e-20!34;UBERON:0003080!5.62e-19!40;UBERON:0002780!3.14e-18!39;UBERON:0001890!3.14e-18!39;UBERON:0006240!3.14e-18!39;UBERON:0002791!2.07e-15!29;UBERON:0003528!2.07e-15!29;UBERON:0001893!2.07e-15!29;UBERON:0007811!4.89e-13!86;UBERON:0000153!1.63e-11!94;UBERON:0000956!2.72e-09!21;UBERON:0001869!2.72e-09!21;UBERON:0000203!2.72e-09!21;UBERON:0002619!4.19e-08!17;UBERON:0002420!8.04e-08!8;UBERON:0007245!8.04e-08!8;UBERON:0010009!8.04e-08!8;UBERON:0010011!8.04e-08!8;UBERON:0000454!8.04e-08!8;UBERON:0000025!2.10e-07!114;UBERON:0003076!3.31e-07!12;UBERON:0003057!3.31e-07!12 | |ontology_enrichment_uberon=UBERON:0001017!6.40e-28!73;UBERON:0005743!6.40e-28!73;UBERON:0000073!1.65e-26!75;UBERON:0001016!1.65e-26!75;UBERON:0001049!1.23e-25!52;UBERON:0005068!1.23e-25!52;UBERON:0006241!1.23e-25!52;UBERON:0007135!1.23e-25!52;UBERON:0000033!2.04e-25!63;UBERON:0004121!4.69e-25!102;UBERON:0000924!4.69e-25!102;UBERON:0006601!4.69e-25!102;UBERON:0002346!6.17e-25!71;UBERON:0003075!6.17e-25!71;UBERON:0007284!6.17e-25!71;UBERON:0000955!1.49e-23!50;UBERON:0006238!1.49e-23!50;UBERON:0003056!6.23e-23!49;UBERON:0002616!8.25e-23!49;UBERON:0002020!7.73e-20!34;UBERON:0003080!5.62e-19!40;UBERON:0002780!3.14e-18!39;UBERON:0001890!3.14e-18!39;UBERON:0006240!3.14e-18!39;UBERON:0002791!2.07e-15!29;UBERON:0003528!2.07e-15!29;UBERON:0001893!2.07e-15!29;UBERON:0007811!4.89e-13!86;UBERON:0000153!1.63e-11!94;UBERON:0000956!2.72e-09!21;UBERON:0001869!2.72e-09!21;UBERON:0000203!2.72e-09!21;UBERON:0002619!4.19e-08!17;UBERON:0002420!8.04e-08!8;UBERON:0007245!8.04e-08!8;UBERON:0010009!8.04e-08!8;UBERON:0010011!8.04e-08!8;UBERON:0000454!8.04e-08!8;UBERON:0000025!2.10e-07!114;UBERON:0003076!3.31e-07!12;UBERON:0003057!3.31e-07!12 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.61e-33,73;UBERON:0000073,5.44e-33,54;UBERON:0001016,1.92e-32,75;UBERON:0001049,3.68e-29,52;UBERON:0005068,3.68e-29,52;UBERON:0006241,3.68e-29,52;UBERON:0007135,3.68e-29,52;UBERON:0004121,1.32e-27,95;UBERON:0000924,1.32e-27,95;UBERON:0006601,1.32e-27,95;UBERON:0002346,2.02e-26,64;UBERON:0003075,2.02e-26,64;UBERON:0007284,2.02e-26,64;UBERON:0010371,2.22e-22,73;UBERON:0000955,5.48e-20,47;UBERON:0006238,5.48e-20,47;UBERON:0003076,1.56e-19,12;UBERON:0003057,1.56e-19,12;UBERON:0002420,3.35e-19,8;UBERON:0007245,3.35e-19,8;UBERON:0010009,3.35e-19,8;UBERON:0010011,3.35e-19,8;UBERON:0000454,3.35e-19,8;UBERON:0002616,1.47e-18,46;UBERON:0002020,4.64e-18,34;UBERON:0010314,1.92e-16,92;UBERON:0002240,9.51e-16,6;UBERON:0005174,9.51e-16,6;UBERON:0001137,9.51e-16,6;UBERON:0001948,7.39e-14,5;UBERON:0002315,7.39e-14,5;UBERON:0003080,7.60e-14,40;UBERON:0003056,1.58e-13,49;UBERON:0000369,2.00e-13,5;UBERON:0002435,2.00e-13,5;UBERON:0000204,2.00e-13,5;UBERON:0010082,2.00e-13,5;UBERON:0002780,1.58e-12,39;UBERON:0001890,1.58e-12,39;UBERON:0006240,1.58e-12,39;UBERON:0000025,5.24e-10,114;UBERON:0003528,6.90e-10,29;UBERON:0002791,6.90e-10,29;UBERON:0001893,6.90e-10,29;UBERON:0002950,2.17e-09,4;UBERON:0001891,2.17e-09,4;UBERON:0009616,2.17e-09,4;UBERON:0010286,2.17e-09,4;UBERON:0002257,4.02e-09,3;UBERON:0004111,5.86e-09,122;UBERON:0011216,3.14e-08,194;UBERON:0004684,3.88e-08,3;UBERON:0002275,3.88e-08,3;UBERON:0002038,2.11e-07,3;UBERON:0009663,2.11e-07,3;UBERON:0009661,2.11e-07,3;UBERON:0000125,2.11e-07,3;UBERON:0002308,2.11e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0.58328969722285,0,0,0,0,0,0,0,0,6.87875966922632,7.93486468908049,4.43681982454325,0,0,0,0,0,0,0,0.207379224616955,0.270011876663381,0.210324961351382,3.99911378165325,3.3130281142742,0.857435594504678,0.670918297127655,0,3.30347642998166,2.17068474744819,1.53606533256243,5.01167893374737,5.03182039813253,3.64639359389732,1.11673199600552,1.12552522006336,2.44477196442896,7.66034322231536,3.70166370077668,6.71038004971082,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.34255163915718,0,0,0.173485326766136,0,0,0,0.117588707135705,0,0,0.433798070759735,0,0,0,0,0,2.92780797011547,1.67557365450764,0,0,0,0,1.49790639404823,2.74500361691176,2.63874139437015,1.73824320192276,1.53429274398198,3.53239675751252,1.62241263067758,0,0,0,0,0.650602214813519,0.459804208866946,0.900310649026746,0.753524089178575,1.08858398642125,1.40925092313335,0.562210347358373,0.776110112217047,0,0,0,0,0.278047249225598,0.348252166522167,0,0,0,0,0,0.828503090142008,0,0.180062061461015,0,0,0,0,0,0,0.16455984991348,0,0.0810688095458557,0,0,0,1.68231958851302,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0.169745085775188,0,0,0,0,0.157635144106191,0,0.318909537314974,0.327726629431476,0,0.144649058581512,0,0,0,0,1.12385412991454,1.28932855251423,0,0,0,0,0.215423397732799,0.238968797952552,0.668396022247182,0,0.404810701674894,0.292255857911312,0.790575555893047,1.28528526568723,0,0.178065603667255,0.651547837414304,0.494910368917606,0,0,0,0,0.295301892880773,0,0,0,0,0.632073515871632,0,0,1.02131881726136,1.26042765821917,0,0.428674070063185,0,0.535106452806212,0.329098041204242,0.608929898229199,0,0,0,0.16488625294148,0,0.120625849856312,0,0.328281799490123,0.291480836629851,1.29797711407357,0,0,0,0.188368457004691,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0,0,0.0826534557253359,0,0,0,0,0.149516546043979,0,0,0.129159823477731,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0.920650473014354,0.572895513439397,0.515559547031063,0.685082519770642,1.5107877947794,0.675022500231806,1.35096360967266,0.453142408984205,0.51776031175182,0.62272408550506,0.798049746802062,0.512200817262403,0,0.628839487883947,0.367687016900028,0.44449345560323,0.206035057238894,0,0.252697211763798,0.50695859978048,0.565879024158229,0.561849044819294,0.89635213366817,0.574354689556133,0.952587382566147,0.463537303779422,0.38581844092741,0.412085900803307,0.294397840268795,0.685738504770831,0,0.953744759789284,0.436039249896986,0.282328141245992,0.592302255241736,0.182927972872773,0.263069711437843,0.407412341537585,0,0.474540072496697,0.394017929502254,0.818462086339379,0.309873682371932,0.385813221962283,0.249810577937946,0.233931608445408,0.214871054048298,0.382576664137687,0.220591419119515,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0.58328969722285,0,0,0,0,0,0,0,0,6.87875966922632,7.93486468908049,4.43681982454325,0,0,0,0,0,0,0,0.207379224616955,0.270011876663381,0.210324961351382,3.99911378165325,3.3130281142742,0.857435594504678,0.670918297127655,0,3.30347642998166,2.17068474744819,1.53606533256243,5.01167893374737,5.03182039813253,3.64639359389732,1.11673199600552,1.12552522006336,2.44477196442896,7.66034322231536,3.70166370077668,6.71038004971082,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.34255163915718,0,0,0.173485326766136,0,0,0,0.117588707135705,0,0,0.433798070759735,0,0,0,0,0,2.92780797011547,1.67557365450764,0,0,0,0,1.49790639404823,2.74500361691176,2.63874139437015,1.73824320192276,1.53429274398198,3.53239675751252,1.62241263067758,0,0,0,0,0.650602214813519,0.459804208866946,0.900310649026746,0.753524089178575,1.08858398642125,1.40925092313335,0.562210347358373,0.776110112217047,0,0,0,0,0.278047249225598,0.348252166522167,0,0,0,0,0,0.828503090142008,0,0.180062061461015,0,0,0,0,0,0,0.16455984991348,0,0.0810688095458557,0,0,0,1.68231958851302,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0.169745085775188,0,0,0,0,0.157635144106191,0,0.318909537314974,0.327726629431476,0,0.144649058581512,0,0,0,0,1.12385412991454,1.28932855251423,0,0,0,0,0.215423397732799,0.238968797952552,0.668396022247182,0,0.404810701674894,0.292255857911312,0.790575555893047,1.28528526568723,0,0.178065603667255,0.651547837414304,0.494910368917606,0,0,0,0,0.295301892880773,0,0,0,0,0.632073515871632,0,0,1.02131881726136,1.26042765821917,0,0.428674070063185,0,0.535106452806212,0.329098041204242,0.608929898229199,0,0,0,0.16488625294148,0,0.120625849856312,0,0.328281799490123,0.291480836629851,1.29797711407357,0,0,0,0.188368457004691,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0,0,0.0826534557253359,0,0,0,0,0.149516546043979,0,0,0.129159823477731,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0.920650473014354,0.572895513439397,0.515559547031063,0.685082519770642,1.5107877947794,0.675022500231806,1.35096360967266,0.453142408984205,0.51776031175182,0.62272408550506,0.798049746802062,0.512200817262403,0,0.628839487883947,0.367687016900028,0.44449345560323,0.206035057238894,0,0.252697211763798,0.50695859978048,0.565879024158229,0.561849044819294,0.89635213366817,0.574354689556133,0.952587382566147,0.463537303779422,0.38581844092741,0.412085900803307,0.294397840268795,0.685738504770831,0,0.953744759789284,0.436039249896986,0.282328141245992,0.592302255241736,0.182927972872773,0.263069711437843,0.407412341537585,0,0.474540072496697,0.394017929502254,0.818462086339379,0.309873682371932,0.385813221962283,0.249810577937946,0.233931608445408,0.214871054048298,0.382576664137687,0.220591419119515,0 | ||
|short_description=p@chr12:47919483..47919504,- | |short_description=p@chr12:47919483..47919504,- | ||
}} | }} |
Latest revision as of 01:44, 5 August 2015
Short description: | p@chr12:47919483..47919504, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:47919483..47919504, - |
Coexpression cluster: | MCL_coexpression_mm9:87 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.04e-29 | 23 |
neuroblast (sensu Vertebrata) | 1.04e-29 | 23 |
neuron | 1.90e-19 | 33 |
neuronal stem cell | 1.90e-19 | 33 |
neuroblast | 1.90e-19 | 33 |
electrically signaling cell | 1.90e-19 | 33 |
electrically responsive cell | 8.01e-16 | 39 |
electrically active cell | 8.01e-16 | 39 |
neural cell | 5.69e-14 | 43 |
ectodermal cell | 1.46e-13 | 44 |
neurectodermal cell | 1.46e-13 | 44 |
granule cell | 3.16e-09 | 3 |
neuron of the ventral spinal cord | 4.02e-09 | 3 |
striatum neuron | 5.76e-09 | 3 |
raphe nuclei neuron | 3.88e-08 | 3 |
neuron of the substantia nigra | 2.11e-07 | 3 |
embryonic cell | 4.61e-07 | 70 |