FFCP PHASE1:Mm9::chr10:66648478..66648516,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=108829 | |EntrezGene=108829 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=640 | |MCL_coexpression_id=640 | ||
|TSSclassifier=NA | |||
|UniProt=Q69ZK6 | |UniProt=Q69ZK6 | ||
|association_with_transcript=0bp_to_ENSMUST00000173661,ENSMUST00000173689,ENSMUST00000173949,NM_001242396,uc007fls.2_5end | |association_with_transcript=0bp_to_ENSMUST00000173661,ENSMUST00000173689,ENSMUST00000173949,NM_001242396,uc007fls.2_5end | ||
|cluster_id=chr10:66648478..66648516,+ | |||
|description=CAGE_peak_2_at_Jmjd1c_5end | |description=CAGE_peak_2_at_Jmjd1c_5end | ||
|id=chr10:66648478..66648516,+ | |id=chr10:66648478..66648516,+ | ||
|ontology_enrichment_celltype=CL:0000988!1.54e-10!32;CL:0002032!1.54e-10!32;CL:0000037!1.54e-10!32;CL:0000566!1.54e-10!32;CL:0000837!1.54e-10!32;CL:0002031!7.35e-08!25;CL:0000838!1.85e-07!12;CL:0000084!8.15e-07!11;CL:0000827!8.15e-07!11 | |ontology_enrichment_celltype=CL:0000988!1.54e-10!32;CL:0002032!1.54e-10!32;CL:0000037!1.54e-10!32;CL:0000566!1.54e-10!32;CL:0000837!1.54e-10!32;CL:0002031!7.35e-08!25;CL:0000838!1.85e-07!12;CL:0000084!8.15e-07!11;CL:0000827!8.15e-07!11 | ||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.53e-10,32;CL:0002032,1.53e-10,32;CL:0000037,1.53e-10,32;CL:0000837,1.53e-10,32;CL:0002031,7.33e-08,25;CL:0000838,1.84e-07,12;CL:0000084,8.13e-07,11;CL:0000827,8.13e-07,11 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!2.08e-14!70;UBERON:0002193!1.03e-10!48;UBERON:0005057!2.94e-10!51;UBERON:0002390!9.93e-10!45;UBERON:0003061!9.93e-10!45;UBERON:0003081!5.10e-09!88;UBERON:0000490!1.59e-08!66;UBERON:0003929!1.66e-08!55;UBERON:0001007!9.43e-08!128;UBERON:0001555!9.43e-08!128;UBERON:0007026!9.43e-08!128;UBERON:0005911!9.53e-08!69;UBERON:0004119!1.03e-07!130;UBERON:0000925!1.03e-07!130;UBERON:0006595!1.03e-07!130;UBERON:0004921!2.26e-07!126;UBERON:0004185!2.26e-07!126;UBERON:0004177!5.66e-07!29 | |ontology_enrichment_uberon=UBERON:0002405!2.08e-14!70;UBERON:0002193!1.03e-10!48;UBERON:0005057!2.94e-10!51;UBERON:0002390!9.93e-10!45;UBERON:0003061!9.93e-10!45;UBERON:0003081!5.10e-09!88;UBERON:0000490!1.59e-08!66;UBERON:0003929!1.66e-08!55;UBERON:0001007!9.43e-08!128;UBERON:0001555!9.43e-08!128;UBERON:0007026!9.43e-08!128;UBERON:0005911!9.53e-08!69;UBERON:0004119!1.03e-07!130;UBERON:0000925!1.03e-07!130;UBERON:0006595!1.03e-07!130;UBERON:0004921!2.26e-07!126;UBERON:0004185!2.26e-07!126;UBERON:0004177!5.66e-07!29 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,8.30e-11,48;UBERON:0002405,8.30e-11,48;UBERON:0001007,1.90e-10,116;UBERON:0001555,1.90e-10,116;UBERON:0007026,1.90e-10,116;UBERON:0004119,2.24e-10,118;UBERON:0000925,2.24e-10,118;UBERON:0006595,2.24e-10,118;UBERON:0004921,5.22e-10,114;UBERON:0002390,8.02e-10,45;UBERON:0003061,8.02e-10,45;UBERON:0003081,1.25e-08,87;UBERON:0000490,1.34e-08,66;UBERON:0003929,1.38e-08,55;UBERON:0001041,3.18e-08,80;UBERON:0005911,8.15e-08,69;UBERON:0004177,4.58e-07,29;UBERON:0005057,4.58e-07,29 | |||
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| ||
|short_description=p2@Jmjd1c | |short_description=p2@Jmjd1c | ||
}} | }} |
Latest revision as of 05:16, 26 September 2015
Short description: | p2@Jmjd1c |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Jmjd1c_5end |
Coexpression cluster: | MCL_coexpression_mm9:640 |
Association with transcript: | 0bp_to_ENSMUST00000173661, ENSMUST00000173689, ENSMUST00000173949, NM_001242396, uc007fls.2_5end |
EntrezGene: | Jmjd1c |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.53e-10 | 32 |
hematopoietic oligopotent progenitor cell | 1.53e-10 | 32 |
hematopoietic stem cell | 1.53e-10 | 32 |
hematopoietic multipotent progenitor cell | 1.53e-10 | 32 |
hematopoietic lineage restricted progenitor cell | 7.33e-08 | 25 |
lymphoid lineage restricted progenitor cell | 1.84e-07 | 12 |
T cell | 8.13e-07 | 11 |
pro-T cell | 8.13e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 8.30e-11 | 48 |
immune system | 8.30e-11 | 48 |
digestive system | 1.90e-10 | 116 |
digestive tract | 1.90e-10 | 116 |
primitive gut | 1.90e-10 | 116 |
endoderm-derived structure | 2.24e-10 | 118 |
endoderm | 2.24e-10 | 118 |
presumptive endoderm | 2.24e-10 | 118 |
subdivision of digestive tract | 5.22e-10 | 114 |
hematopoietic system | 8.02e-10 | 45 |
blood island | 8.02e-10 | 45 |
lateral plate mesoderm | 1.25e-08 | 87 |
unilaminar epithelium | 1.34e-08 | 66 |
gut epithelium | 1.38e-08 | 55 |
foregut | 3.18e-08 | 80 |
endo-epithelium | 8.15e-08 | 69 |
hemopoietic organ | 4.58e-07 | 29 |
immune organ | 4.58e-07 | 29 |