FFCP PHASE1:Hg19::chr2:238767388..238767402,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:238767388..238767402,+
|short_description=p4@RAMP1
|description=CAGE_peak_4_at_RAMP1_5end
|association_with_transcript=-133bp_to_ENST00000404910_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10267 | |EntrezGene=10267 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9843 | |HGNC=9843 | ||
|TSSclassifier=strong | |||
|UniProt=E9PC20 | |UniProt=E9PC20 | ||
|association_with_transcript=-133bp_to_ENST00000404910_5end | |||
|cluster_id=chr2:238767388..238767402,+ | |||
|coexpression_cluster_id=C61 | |||
|description=CAGE_peak_4_at_RAMP1_5end | |||
|id=chr2:238767388..238767402,+ | |||
|ontology_enrichment_celltype=CL:0000990!3.83e-15!8;CL:0000451!4.86e-12!10;CL:0000453!1.43e-11!5;CL:0000840!3.09e-09!5;CL:0001029!3.09e-09!5 | |||
|ontology_enrichment_celltype_v019=CL:0000990;3.05e-53;8!CL:0000453;1.45e-43;5!CL:0000451;1.49e-43;10!CL:0000840;1.47e-20;5!CL:0001014;4.53e-08;2!CL:0001016;4.53e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000990,2.44e-53,8;CL:0000451,1.24e-43,10;CL:0000453,1.53e-43,5;CL:0000840,1.25e-20,5;CL:0001029,1.25e-20,5;CL:0001014,4.69e-08,2;CL:0001016,4.69e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0007297;7.52e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1909;7.52e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,8.60e-08,2 | |||
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|ontology_enrichment_uberon_v019=UBERON:0001896;4.37e-40;3!UBERON:0005290;4.37e-40;3!UBERON:0002298;1.98e-20;6!UBERON:0001301;2.11e-14;1!UBERON:0004733;1.57e-10;12!UBERON:0002028;1.57e-10;12!UBERON:0004732;9.19e-10;13!UBERON:0002702;7.52e-08;2!UBERON:0001875;7.52e-08;2!UBERON:0006514;7.52e-08;2 | |||
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| ||
|short_description=p4@RAMP1 | |||
}} | }} |
Latest revision as of 05:07, 16 September 2015
Short description: | p4@RAMP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_RAMP1_5end |
Coexpression cluster: | C61_migratory_Dendritic_immature_Macrophage_xeroderma_cord_b |
Association with transcript: | -133bp_to_ENST00000404910_5end |
EntrezGene: | RAMP1 |
HGNC: | 9843 |
UniProt: | E9PC20 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
conventional dendritic cell | 2.44e-53 | 8 |
dendritic cell | 1.24e-43 | 10 |
Langerhans cell | 1.53e-43 | 5 |
immature conventional dendritic cell | 1.25e-20 | 5 |
common dendritic progenitor | 1.25e-20 | 5 |
CD1a-positive Langerhans cell | 4.69e-08 | 2 |
immature CD1a-positive Langerhans cell | 4.69e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
medulla oblongata | 4.38e-40 | 3 |
myelencephalon | 4.38e-40 | 3 |
future myelencephalon | 4.38e-40 | 3 |
brainstem | 1.99e-20 | 6 |
posterior neural tube | 1.82e-14 | 15 |
chordal neural plate | 1.82e-14 | 15 |
epididymis | 3.15e-14 | 1 |
segmental subdivision of hindbrain | 1.57e-10 | 12 |
hindbrain | 1.57e-10 | 12 |
presumptive hindbrain | 1.57e-10 | 12 |
segmental subdivision of nervous system | 9.19e-10 | 13 |
neural tube | 4.60e-08 | 56 |
neural rod | 4.60e-08 | 56 |
future spinal cord | 4.60e-08 | 56 |
neural keel | 4.60e-08 | 56 |
globus pallidus | 6.58e-08 | 2 |
pallidum | 6.58e-08 | 2 |
middle frontal gyrus | 7.03e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
melanoma | 8.60e-08 | 2 |