Personal tools

FFCP PHASE1:Mm9::chr1:16095475..16095491,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=98711
|EntrezGene=98711
|HGNC=
|HGNC=
|MCL_coexpression_id=661
|MCL_coexpression_id=661
|TSSclassifier=NA
|UniProt=Q8VCH7
|UniProt=Q8VCH7
|association_with_transcript=-363bp_to_ENSMUST00000027053_5end
|association_with_transcript=-363bp_to_ENSMUST00000027053_5end
|cluster_id=chr1:16095475..16095491,+
|description=CAGE_peak_1_at_Rdh10_5end
|description=CAGE_peak_1_at_Rdh10_5end
|id=chr1:16095475..16095491,+
|id=chr1:16095475..16095491,+
|ontology_enrichment_celltype=CL:0000066!2.50e-09!25;CL:0000223!8.72e-08!20
|ontology_enrichment_celltype=CL:0000066!2.50e-09!25;CL:0000223!8.72e-08!20
|ontology_enrichment_celltype_v019_2=CL:0000066,1.76e-09,25;CL:0000223,6.59e-08,20
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0005409!8.49e-11!59;UBERON:0004119!4.19e-10!130;UBERON:0000925!4.19e-10!130;UBERON:0006595!4.19e-10!130;UBERON:0001007!1.46e-09!128;UBERON:0001555!1.46e-09!128;UBERON:0007026!1.46e-09!128;UBERON:0004921!1.09e-08!126;UBERON:0004185!1.09e-08!126;UBERON:0004923!2.04e-08!24;UBERON:0000160!3.88e-07!43
|ontology_enrichment_uberon=UBERON:0005409!8.49e-11!59;UBERON:0004119!4.19e-10!130;UBERON:0000925!4.19e-10!130;UBERON:0006595!4.19e-10!130;UBERON:0001007!1.46e-09!128;UBERON:0001555!1.46e-09!128;UBERON:0007026!1.46e-09!128;UBERON:0004921!1.09e-08!126;UBERON:0004185!1.09e-08!126;UBERON:0004923!2.04e-08!24;UBERON:0000160!3.88e-07!43
|ontology_enrichment_uberon_v019_2=UBERON:0005409,2.65e-14,47;UBERON:0004119,4.11e-11,118;UBERON:0000925,4.11e-11,118;UBERON:0006595,4.11e-11,118;UBERON:0001007,1.54e-10,116;UBERON:0001555,1.54e-10,116;UBERON:0007026,1.54e-10,116;UBERON:0000160,1.58e-10,31;UBERON:0004921,1.34e-09,114;UBERON:0004923,1.50e-08,24
|phase1_expression=2.40223270657191,96.666187916103,134.679774859303,16.3330674105688,26.0465779572101,32.4006994789947,30.3696432774183,0.516493293766305,11.9670413828917,19.1932911584035,0.171217968225505,0.0797721589953364,0.342401459862411,0.437102012094987,2.6648780945253,1.21485160433896,0,0,0.137114433605739,0.42438965179803,6.71841992193451,0.397163804803541,2.08959831311148,57.1172949372462,79.8344298113752,72.3532274784925,63.322013435384,53.6523369387864,2.28028103347649,2.26827116783938,25.2772782147047,0.635030673459631,1.84519436275371,0,3.17736781726402,1.16364251750945,4.69589519403449,0.418531630736908,0.7813353445238,0.523523743973798,1.76469446409304,2.04913645487534,0,2.26614272356039,2.12891555560981,4.58866880404204,0,7.84890562969608,17.5748946187577,15.3599620268684,2.37976916763116,8.62515386189829,0.503347818173209,3.62681071005672,2.35265659399725,0.514518872071894,0.286533439938757,1.03134418455488,0.404632921719196,0,3.1691570175309,5.76035704517525,0.889294796111139,2.2497492932035,0,4.2628806896766,16.7776061890307,36.5007390055477,1.14058573539325,2.02508907497536,0.420649922702764,1.71390590642282,1.10434270475807,0.122490799214954,0.479227355091182,0,0,0.383062014255563,0.46081959976873,0.923204014111357,1.18933936683133,1.04182674111352,0.558365998002762,0.56276261003168,0.763991238884051,2.65165726926301,2.56269025438385,1.86399445825301,7.26971455998567,4.60986516651392,7.8263411949453,6.88339101585109,28.5587960157255,5.39703191637817,7.14754059192436,4.92829575807069,3.5111105032938,6.81721290312231,6.49465011507172,5.65343319216544,4.08445917352373,6.41632387071589,12.7402619853323,7.11066703153331,57.3701258679717,61.0597275794988,64.7071289618923,5.36664234679582,4.91981978929626,0.742210695324124,5.72501578328248,0.913396434936424,2.53677046981664,0.753613202763113,1.76383060703557,0.628332956648377,5.19109432242185,1.15679485535929,0,2.75003644910596,1.32504911076236,0.484875253135222,3.72783522436244,1.17112318804619,1.8850203613211,9.70736809792647,0.359445373517761,1.79970819298022,0.508280908292259,0.299581278809645,0.457500602818626,1.00523481690292,0,0.511430914660661,0.62336413367868,0.162241263067758,9.980257657331,0.248813941220186,1.0108910337347,35.3542317889276,6.63614259109789,15.4034409970427,14.945156773844,20.646560043493,39.1209870120135,27.0319949801033,31.7648846257481,34.1488449375501,0.215567992932842,7.18603104637713,34.6623714602979,27.6186622858744,13.3462679628287,2.43776516565517,3.49829631893504,10.7478504081986,0,1.54408744268829,1.42081749697796,1.24275463521301,3.28336483973535,1.62055855314913,1.65721314909647,0.196764231747404,0.617068451549513,0.697601834251224,1.07309360559848,0.583826711835847,1.6455984991348,0.820837320395476,0.243206428637567,0.584799949701329,0.658650345873152,1.20785776884335,1.05144974282064,6.48299057989492,8.92130714056255,7.66906643324278,14.2903127858607,16.7210403739516,15.3352278973291,12.7060620512706,11.7860363237781,9.13083005340284,13.2868137232463,12.1877226495768,8.54539709920916,8.75408476981064,10.7230247915516,17.0775687644302,6.91641759599022,9.16049856970089,12.3284135619503,5.71242563048644,7.88954149711563,4.48032921259691,6.40043207653165,7.08371780892217,4.61626721007078,11.3659813944294,8.79192875911699,8.14421281883883,6.52195779591728,1.00107063429656,1.17935397067922,0.674586337154561,0.202860121388503,0.482354319504834,1.52775511068852,0.575392274901621,0.486405680325106,0.274561413188081,1.43768206527355,0.744281895337007,3.12037673114561,6.81962970457202,5.20252499213545,5.78932225636041,6.46636165583116,12.3169417650815,5.86673915191293,1.35796068620151,2.11221223459652,2.01007508930179,2.38043640886014,2.92700471786698,5.35959489961049,3.98636441367795,3.98636921643718,2.29408640602033,1.89953480052485,2.02508682014116,0,0,2.45882136509518,0.551873492609465,0.642202359951168,0.586058432961016,0.819674726883377,1.00988370881749,1.26203287766503,1.56175497718655,0,3.58453196928828,4.01037613348309,2.26461224631066,0.404810701674894,0.876767573733936,0,0.321321316421807,14.0520684356186,14.7794451043822,25.8990265372186,26.0652794296606,1.32745138339963,7.04063844849446,5.13950046840077,1.88605079755898,1.77181135728464,3.68922177532713,6.97756391554197,0.727067458955011,2.13898427030833,1.8962205476149,0,0,2.7235168460303,5.221771726908,5.30370603509293,5.5727629108214,6.91626911204867,4.63758925765383,3.9491764944509,4.87143918583359,10.560226862867,6.56679419677843,0.882113592219848,1.15420377059036,1.61464426695906,1.99032652262914,2.26807453605959,2.9545361954111,6.70405924248657,0,12.9861869406368,32.1963514022627,17.0378965180135,9.04168593622517,8.47504211870356,8.69357058184786,0.509935289981566,0.559805809294632,0.552799895217695,3.81868247206045,6.16855187483214,9.96265388921559,5.61627772273367,4.18176592028937,3.71216358368502,5.25970950900801,8.92657321833628,4.97336289769656,3.88844919875379,2.4853572523477,0.56369293868419,1.49516546043979,1.82004339502807,3.30567020184881,3.48731523389874,2.53434188236167,2.8165737274981,4.6873578543822,3.14578033277133,0.483168241652012,0.864090018773596,1.58005560314089,10.7444364103787,7.70332178736204,5.45667456506739,3.22248052201467,5.16571522431289,1.56254084375959,2.51072196196781,1.41353029927407,1.5241361331,0.907435666231565,0.974578807397524,0.673482891482306,0.467507608726276,3.40095575422817,1.33191572024439,0.897138566094757,1.84673078000486,1.9318959403219,6.56888664079137,101.832303092599,22.723048182381,19.5613120573792,0,0.460325236507177,0.572895513439397,1.03111909406213,0,0,0.675022500231806,0,0,0,1.03787347584177,4.78829848081237,5.80494259564056,2.67417388775123,1.25767897576789,1.83843508450014,3.11145418922261,0.824140228955577,4.1719497246936,1.51618327058278,1.77435509923168,2.82939512079114,1.77918864192777,2.36893063898016,2.23998328926892,4.76293691283074,3.1288768005111,3.47236596834669,2.06042950401653,2.94397840268795,2.40008476669791,2.12970967391205,2.14592570952589,1.74415699958794,1.50575008664529,1.94613598150856,1.09756783723664,1.31534855718921,1.22223702461276,5.05028044491965,2.37270036248348,2.1670986122624,2.04615521584845,2.01417893541756,1.92906610981141,2.49810577937946,4.44470056046276,2.79332370262788,2.86932498103265,3.30887128679273,0.695603506861264
|phase1_expression=2.40223270657191,96.666187916103,134.679774859303,16.3330674105688,26.0465779572101,32.4006994789947,30.3696432774183,0.516493293766305,11.9670413828917,19.1932911584035,0.171217968225505,0.0797721589953364,0.342401459862411,0.437102012094987,2.6648780945253,1.21485160433896,0,0,0.137114433605739,0.42438965179803,6.71841992193451,0.397163804803541,2.08959831311148,57.1172949372462,79.8344298113752,72.3532274784925,63.322013435384,53.6523369387864,2.28028103347649,2.26827116783938,25.2772782147047,0.635030673459631,1.84519436275371,0,3.17736781726402,1.16364251750945,4.69589519403449,0.418531630736908,0.7813353445238,0.523523743973798,1.76469446409304,2.04913645487534,0,2.26614272356039,2.12891555560981,4.58866880404204,0,7.84890562969608,17.5748946187577,15.3599620268684,2.37976916763116,8.62515386189829,0.503347818173209,3.62681071005672,2.35265659399725,0.514518872071894,0.286533439938757,1.03134418455488,0.404632921719196,0,3.1691570175309,5.76035704517525,0.889294796111139,2.2497492932035,0,4.2628806896766,16.7776061890307,36.5007390055477,1.14058573539325,2.02508907497536,0.420649922702764,1.71390590642282,1.10434270475807,0.122490799214954,0.479227355091182,0,0,0.383062014255563,0.46081959976873,0.923204014111357,1.18933936683133,1.04182674111352,0.558365998002762,0.56276261003168,0.763991238884051,2.65165726926301,2.56269025438385,1.86399445825301,7.26971455998567,4.60986516651392,7.8263411949453,6.88339101585109,28.5587960157255,5.39703191637817,7.14754059192436,4.92829575807069,3.5111105032938,6.81721290312231,6.49465011507172,5.65343319216544,4.08445917352373,6.41632387071589,12.7402619853323,7.11066703153331,57.3701258679717,61.0597275794988,64.7071289618923,5.36664234679582,4.91981978929626,0.742210695324124,5.72501578328248,0.913396434936424,2.53677046981664,0.753613202763113,1.76383060703557,0.628332956648377,5.19109432242185,1.15679485535929,0,2.75003644910596,1.32504911076236,0.484875253135222,3.72783522436244,1.17112318804619,1.8850203613211,9.70736809792647,0.359445373517761,1.79970819298022,0.508280908292259,0.299581278809645,0.457500602818626,1.00523481690292,0,0.511430914660661,0.62336413367868,0.162241263067758,9.980257657331,0.248813941220186,1.0108910337347,35.3542317889276,6.63614259109789,15.4034409970427,14.945156773844,20.646560043493,39.1209870120135,27.0319949801033,31.7648846257481,34.1488449375501,0.215567992932842,7.18603104637713,34.6623714602979,27.6186622858744,13.3462679628287,2.43776516565517,3.49829631893504,10.7478504081986,0,1.54408744268829,1.42081749697796,1.24275463521301,3.28336483973535,1.62055855314913,1.65721314909647,0.196764231747404,0.617068451549513,0.697601834251224,1.07309360559848,0.583826711835847,1.6455984991348,0.820837320395476,0.243206428637567,0.584799949701329,0.658650345873152,1.20785776884335,1.05144974282064,6.48299057989492,8.92130714056255,7.66906643324278,14.2903127858607,16.7210403739516,15.3352278973291,12.7060620512706,11.7860363237781,9.13083005340284,13.2868137232463,12.1877226495768,8.54539709920916,8.75408476981064,10.7230247915516,17.0775687644302,6.91641759599022,9.16049856970089,12.3284135619503,5.71242563048644,7.88954149711563,4.48032921259691,6.40043207653165,7.08371780892217,4.61626721007078,11.3659813944294,8.79192875911699,8.14421281883883,6.52195779591728,1.00107063429656,1.17935397067922,0.674586337154561,0.202860121388503,0.482354319504834,1.52775511068852,0.575392274901621,0.486405680325106,0.274561413188081,1.43768206527355,0.744281895337007,3.12037673114561,6.81962970457202,5.20252499213545,5.78932225636041,6.46636165583116,12.3169417650815,5.86673915191293,1.35796068620151,2.11221223459652,2.01007508930179,2.38043640886014,2.92700471786698,5.35959489961049,3.98636441367795,3.98636921643718,2.29408640602033,1.89953480052485,2.02508682014116,0,0,2.45882136509518,0.551873492609465,0.642202359951168,0.586058432961016,0.819674726883377,1.00988370881749,1.26203287766503,1.56175497718655,0,3.58453196928828,4.01037613348309,2.26461224631066,0.404810701674894,0.876767573733936,0,0.321321316421807,14.0520684356186,14.7794451043822,25.8990265372186,26.0652794296606,1.32745138339963,7.04063844849446,5.13950046840077,1.88605079755898,1.77181135728464,3.68922177532713,6.97756391554197,0.727067458955011,2.13898427030833,1.8962205476149,0,0,2.7235168460303,5.221771726908,5.30370603509293,5.5727629108214,6.91626911204867,4.63758925765383,3.9491764944509,4.87143918583359,10.560226862867,6.56679419677843,0.882113592219848,1.15420377059036,1.61464426695906,1.99032652262914,2.26807453605959,2.9545361954111,6.70405924248657,0,12.9861869406368,32.1963514022627,17.0378965180135,9.04168593622517,8.47504211870356,8.69357058184786,0.509935289981566,0.559805809294632,0.552799895217695,3.81868247206045,6.16855187483214,9.96265388921559,5.61627772273367,4.18176592028937,3.71216358368502,5.25970950900801,8.92657321833628,4.97336289769656,3.88844919875379,2.4853572523477,0.56369293868419,1.49516546043979,1.82004339502807,3.30567020184881,3.48731523389874,2.53434188236167,2.8165737274981,4.6873578543822,3.14578033277133,0.483168241652012,0.864090018773596,1.58005560314089,10.7444364103787,7.70332178736204,5.45667456506739,3.22248052201467,5.16571522431289,1.56254084375959,2.51072196196781,1.41353029927407,1.5241361331,0.907435666231565,0.974578807397524,0.673482891482306,0.467507608726276,3.40095575422817,1.33191572024439,0.897138566094757,1.84673078000486,1.9318959403219,6.56888664079137,101.832303092599,22.723048182381,19.5613120573792,0,0.460325236507177,0.572895513439397,1.03111909406213,0,0,0.675022500231806,0,0,0,1.03787347584177,4.78829848081237,5.80494259564056,2.67417388775123,1.25767897576789,1.83843508450014,3.11145418922261,0.824140228955577,4.1719497246936,1.51618327058278,1.77435509923168,2.82939512079114,1.77918864192777,2.36893063898016,2.23998328926892,4.76293691283074,3.1288768005111,3.47236596834669,2.06042950401653,2.94397840268795,2.40008476669791,2.12970967391205,2.14592570952589,1.74415699958794,1.50575008664529,1.94613598150856,1.09756783723664,1.31534855718921,1.22223702461276,5.05028044491965,2.37270036248348,2.1670986122624,2.04615521584845,2.01417893541756,1.92906610981141,2.49810577937946,4.44470056046276,2.79332370262788,2.86932498103265,3.30887128679273,0.695603506861264
|short_description=p1@Rdh10
|short_description=p1@Rdh10
}}
}}

Latest revision as of 15:23, 26 September 2015

Short description:p1@Rdh10
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rdh10_5end
Coexpression cluster:MCL_coexpression_mm9:661
Association with transcript: -363bp_to_ENSMUST00000027053_5end
EntrezGene:Rdh10
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Rdh10

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.40
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I596.67
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6134.68
CD326+ enterocyte, pool1.CNhs13542.11848-124I316.33
CD326+ enterocyte, pool2.CNhs13197.11849-124I426.05
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I732.40
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I830.37
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.52
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E711.97
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F219.19
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.34
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.44
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.21
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A36.72
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.40
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I92.09
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D157.12
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D279.83
GP2+ M cell, pool1.CNhs13228.11845-124H972.35
GP2+ M cell, pool2.CNhs13231.11846-124I163.32
GP2+ M cell, pool3.CNhs13240.11847-124I253.65
Ileum epithelium, pool1.CNhs13199.10252-104B92.28
Ileum epithelium, pool2.CNhs13232.10253-104C12.27
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C825.28
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.85
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F53.18
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.16
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F74.70
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.27
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.13
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B34.59
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C27.85
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B817.57
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C315.36
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.38
Mouse Astrocytes, donor3.CNhs12107.11633-122C48.63
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.50
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I93.63
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.35
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C73.17
Mouse Meningeal cells, donor1.CNhs12132.11716-123C65.76
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C72.25
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D24.26
Mouse Microglia, donor1.CNhs12629.11718-123C816.78
Mouse Microglia, donor2.CNhs12634.11736-123E836.50
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.14
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.03
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.10
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.48
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.38
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.46
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.92
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.19
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.76
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.65
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.56
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.86
Mouse Schwann, donor1.CNhs12507.11728-123D97.27
Mouse Schwann, donor2.CNhs12573.11746-123F94.61
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G37.83
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F76.88
Mouse hepatocyte, donor1.CNhs13078.11714-123C428.56
Mouse hepatocyte, donor3.CNhs12615.11637-122C85.40
Mouse hepatocyte, donor6.CNhs13090.11822-124F47.15
Mouse hepatocyte, donor8.CNhs13091.11824-124F64.93
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I76.82
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E36.49
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I85.65
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G64.08
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H16.42
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I812.74
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G157.37
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G261.06
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G364.71
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B65.37
accessory axillary lymph node, adult.CNhs10475.1063-29H94.92
adrenal gland, adult.CNhs10508.49-24D70.74
adrenal gland, embryo E14.CNhs11038.406-44C55.73
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I12.54
adrenal gland, embryo E18.CNhs11026.1262-18F50.75
adrenal gland, neonate N00.CNhs11191.1311-23C11.76
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A85.19
aorta, adult.CNhs10498.46-23H11.16
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F52.75
bone (os femoris), neonate N16.CNhs11225.1525-43A61.33
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B21.17
cerebellum, neonate N30.CNhs11135.1395-42I21.89
colon, adult.CNhs10468.36-18H79.71
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.36
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.51
corpora quadrigemina, adult.CNhs10501.16-22A40.30
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F11.01
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F20.62
diencephalon, neonate N30.CNhs11201.1388-42B20.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B19.98
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B21.01
eyeball, adult.CNhs10484.31-12G435.35
eyeball, embryo E12.CNhs11016.345-16C66.64
eyeball, embryo E14.CNhs10521.399-16E215.40
eyeball, embryo E15.CNhs10593.426-16C914.95
eyeball, embryo E17.CNhs11023.1261-18D420.65
eyeball, neonate N00.CNhs11207.633-15C639.12
eyeball, neonate N01.CNhs11140.1532-43E727.03
eyeball, neonate N02.CNhs11205.1551-44G831.76
eyeball, neonate N16.CNhs11188.777-19A234.15
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H27.19
forelimb, embryo E13.CNhs10589.384-1E234.66
forelimb, embryo E14.CNhs10577.413-26A827.62
forelimb, embryo E15.CNhs11007.437-20E713.35
forelimb, embryo E17.CNhs10598.1517-43C42.44
forelimb, embryo E18.CNhs11008.1520-43B53.50
gonad, embryo E13.CNhs11044.1564-45I610.75
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.54
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.42
heart, embryo E11.CNhs10586.331-24E91.24
heart, embryo E12.CNhs11015.353-12F53.28
heart, embryo E13.CNhs11013.376-3I91.62
heart, embryo E14.CNhs10597.403-26D41.66
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E30.58
heart, neonate N03.CNhs11221.1349-25I21.65
heart, neonate N10.CNhs11118.749-24G10.82
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D30.66
heart, neonate N30.CNhs11202.1390-42D21.21
hippocampus, adult.CNhs10478.13-16E81.05
hippocampus, neonate N00.CNhs11228.627-43G16.48
intestinal mucosa, adult.CNhs10506.860-29I38.92
intestine, adult.CNhs10496.178-9A37.67
intestine, embryo E12.CNhs11019.1251-16I514.29
intestine, embryo E13.CNhs11010.381-16D516.72
intestine, embryo E15.CNhs10602.976-16D815.34
intestine, embryo E16.CNhs10585.463-22H412.71
intestine, embryo E17.CNhs10582.482-18D311.79
intestine, embryo E18.CNhs10526.1289-20F79.13
intestine, neonate N00.CNhs11126.644-26D113.29
intestine, neonate N01.CNhs11192.1322-23E912.19
intestine, neonate N06.CNhs11102.688-20B88.55
intestine, neonate N07.CNhs11095.720-20F28.75
intestine, neonate N10.CNhs11098.755-23A510.72
intestine, neonate N20.CNhs11187.827-18D117.08
intestine, neonate N25.CNhs11121.1352-25E36.92
intestine, neonate N30.CNhs11131.1384-42G19.16
kidney, embryo E14.CNhs10606.411-4I912.33
kidney, embryo E15.CNhs10997.434-16F85.71
kidney, embryo E16.CNhs10584.464-22A57.89
kidney, embryo E17.CNhs11028.483-18I24.48
kidney, embryo E18.CNhs11001.1288-20C76.40
kidney, neonate N00.CNhs11214.646-21G77.08
kidney, neonate N10.CNhs11206.758-6D54.62
kidney, neonate N20.CNhs11113.832-19I111.37
kidney, neonate N25.CNhs11122.1353-25F38.79
kidney, neonate N30.CNhs11203.1385-42H18.14
liver, adult pregnant day01.CNhs10466.508-5B26.52
liver, embryo E12.CNhs10601.355-15F81.00
liver, embryo E13.CNhs10524.378-3H61.18
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A31.53
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.49
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B93.12
liver, neonate N20.CNhs11220.823-25A36.82
liver, neonate N25.CNhs11198.1368-26H15.20
liver, neonate N30.CNhs11106.1382-42D15.79
lung, adult.CNhs10474.28-22B16.47
lung, embryo E12.CNhs10522.354-16G212.32
lung, embryo E14.CNhs10604.404-26F85.87
lung, embryo E15.CNhs11020.432-17C51.36
lung, embryo E16.CNhs10998.458-17B62.11
lung, embryo E17.CNhs10605.480-44A62.01
lung, embryo E18.CNhs10583.1287-20I62.38
lung, neonate N00.CNhs11224.640-42C62.93
lung, neonate N06.CNhs11212.683-20E55.36
lung, neonate N07.CNhs11111.715-19A33.99
lung, neonate N10.CNhs11219.750-23E63.99
lung, neonate N20.CNhs11109.822-18A42.29
lung, neonate N25.CNhs11119.1359-25C71.90
lung, neonate N30.CNhs11133.1394-42H22.03
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B62.46
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C20.64
medulla oblongata, neonate N30.CNhs11200.1396-42A30.59
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.82
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.01
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D73.58
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D84.01
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.26
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I714.05
ovary, embryo E18.CNhs11040.505-44H714.78
ovary, neonate N00.CNhs11217.1299-22I425.90
oviduct, adult pregnant day01.CNhs10500.988-6G626.07
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F47.04
pancreas, embryo E15.CNhs11042.1556-45F25.14
pancreas, embryo E16.CNhs11003.460-26E51.89
pancreas, embryo E17.CNhs10599.1558-45G31.77
pancreas, embryo E18.CNhs10580.1535-43I73.69
pancreas, neonate N00.CNhs11105.645-26G96.98
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D82.14
pancreas, neonate N16.CNhs11136.787-43B61.90
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.72
pituitary gland, embryo E12.CNhs11018.346-16E65.22
pituitary gland, embryo E13.CNhs11009.370-44C75.30
pituitary gland, embryo E14.CNhs11037.398-44A55.57
pituitary gland, embryo E15.CNhs10592.427-16B96.92
pituitary gland, embryo E16.CNhs11036.449-43F64.64
pituitary gland, embryo E17.CNhs11039.1265-44F53.95
pituitary gland, neonate N00.CNhs11190.1308-22E94.87
placenta, adult pregnant day10.CNhs10472.539-13I710.56
placenta, adult pregnant day17.CNhs10464.577-18G36.57
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C31.15
skin, neonate N00.CNhs11124.650-25G41.61
skin, neonate N03.CNhs11215.662-22H31.99
skin, neonate N06.CNhs11097.693-20I52.27
skin, neonate N10.CNhs11108.762-6C42.95
small intestine, neonate N16.CNhs11114.790-21I16.70
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G212.99
spleen, embryo E16.CNhs11035.461-43C132.20
spleen, embryo E18.CNhs11011.1271-21F217.04
spleen, neonate N10.CNhs11116.752-24D19.04
spleen, neonate N20.CNhs11112.824-19H18.48
spleen, neonate N25.CNhs11099.1354-25G38.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.51
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.56
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.55
stomach, adult.CNhs10503.33-1H63.82
stomach, embryo E12.CNhs10588.356-43E36.17
stomach, embryo E15.CNhs10603.1252-16G89.96
stomach, embryo E16.CNhs11022.459-17D45.62
stomach, embryo E17.CNhs11006.1035-18D54.18
stomach, embryo E18.CNhs10999.1286-20C63.71
stomach, neonate N03.CNhs11193.1340-24B85.26
stomach, neonate N07.CNhs11210.718-18A98.93
stomach, neonate N25.CNhs11104.1355-25E44.97
stomach, neonate N30.CNhs11134.1386-42I13.89
submandibular gland, adult.CNhs10469.59-29C12.49
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F51.50
testis, embryo E15.CNhs11034.443-27C51.82
testis, embryo E16.CNhs11033.470-26G53.31
testis, embryo E17.CNhs11029.486-18I53.49
testis, embryo E18.CNhs11027.503-18G52.53
testis, neonate N00.CNhs11189.1300-22B72.82
testis, neonate N07.CNhs11222.726-26I44.69
testis, neonate N10.CNhs11204.763-44D93.15
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B51.58
thymus, embryo E14.CNhs11041.402-44I410.74
thymus, embryo E15.CNhs11005.430-45I27.70
thymus, embryo E16.CNhs11002.456-26C55.46
thymus, embryo E17.CNhs10581.478-18C13.22
thymus, embryo E18.CNhs10595.1273-19G45.17
thymus, neonate N02.CNhs11181.1541-43F81.56
thymus, neonate N03.CNhs11137.2104-43C72.51
thymus, neonate N06.CNhs11197.681-26C41.41
thymus, neonate N07.CNhs11211.713-19D31.52
thymus, neonate N10.CNhs11194.748-24E40.91
thymus, neonate N20.CNhs11186.820-7A20.97
thymus, neonate N25.CNhs11125.1362-25G70.67
thymus, neonate N30.CNhs11132.1393-42G20.47
tongue, adult.CNhs10499.32-1B43.40
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.33
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.90
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.85
urinary bladder, adult.CNhs10481.879-12E41.93
uterus, adult pregnant day19.CNhs10497.590-15F56.57
uterus, adult.CNhs10509.92-27E5101.83
vagina, adult.CNhs10502.89-27D522.72
vesicular gland, adult.CNhs10491.51-27F819.56
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.03
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I81.04
whole body, embryo E12.CNhs10587.857-27C94.79
whole body, embryo E13.CNhs10512.372-23H25.80
whole body, embryo E14.5.CNhs10578.420-27D22.67
whole body, embryo E14.CNhs10519.395-14B11.26
whole body, embryo E16.CNhs10514.453-14F21.84
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.17
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.83
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.76
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.13
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.47
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.94
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.13
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.15
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.95
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G55.05
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.17
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.01
whole body, embryo E17.5.CNhs10513.490-9F91.93
whole body, embryo E17.CNhs10517.475-3I52.50
whole body, embryo E18.CNhs10516.493-3B34.44
whole body, neonate N00.CNhs10525.657-19C22.79
whole body, neonate N01.CNhs10576.659-23C62.87
whole body, neonate N06.CNhs10515.692-21D13.31
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
epithelial cell1.76e-0925
endodermal cell6.59e-0820

Uber anatomy
Ontology termp-valuen
gastrointestinal system2.65e-1447
endoderm-derived structure4.11e-11118
endoderm4.11e-11118
presumptive endoderm4.11e-11118
digestive system1.54e-10116
digestive tract1.54e-10116
primitive gut1.54e-10116
intestine1.58e-1031
subdivision of digestive tract1.34e-09114
organ component layer1.50e-0824
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr1:16095475..16095491,%2B&oldid=4260536"